EY675339

Overview
NameEY675339
Unique NameEY675339
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1047
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 2.330e-62
Identity = 116/120 (96.67%), Postives = 119/120 (99.17%), Query Frame = 3
Query:   15 GSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSNPSN 374
            G+ALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNN+KAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKAL SFRSNP+N
Sbjct:  159 GTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALASFRSNPTN 278          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 234.958 bits (598), Expect = 5.740e-61
Identity = 113/121 (93.39%), Postives = 119/121 (98.35%), Query Frame = 3
Query:   12 KGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSNPSN 374
            KG+ALGAEIIGTFVLVYTVFSATDPKRSARDSH+PVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNN+KAWDD WIFWVGPF+GALAAAAYHQYILRA+AIKALGSFRSN +N
Sbjct:  160 KGTALGAEIIGTFVLVYTVFSATDPKRSARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPFLGALAAAAYHQYILRASAIKALGSFRSNATN 280          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 7.496e-61
Identity = 111/121 (91.74%), Postives = 117/121 (96.69%), Query Frame = 3
Query:   12 KGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSNPSN 374
            KG+A GAE+IGTFVLVYTVFSATDPKRSARDSHVP+LAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYN  + WDDHWIFWVGPFVGALAAAAYHQY+LRAAAIKALGSFRSNP+N
Sbjct:  162 KGTAFGAELIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKKRVWDDHWIFWVGPFVGALAAAAYHQYVLRAAAIKALGSFRSNPTN 282          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 234.187 bits (596), Expect = 9.791e-61
Identity = 113/120 (94.17%), Postives = 116/120 (96.67%), Query Frame = 3
Query:   15 GSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSNPSN 374
            G+ALGAEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAAVIYN  KAWDDHWIFW GPF+GALAAAAYHQYILRAAAIKALGSFRSNPSN
Sbjct:  163 GTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIYNQKKAWDDHWIFWAGPFIGALAAAAYHQYILRAAAIKALGSFRSNPSN 282          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.948e-57
Identity = 106/118 (89.83%), Postives = 112/118 (94.92%), Query Frame = 3
Query:   12 KGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSN 365
            KG+ALGAEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIP+TGTGINPARSFG AVI+NNDKAWDD WI+WVGPFVGA  AA YHQYILR +AIKALGSFRSN
Sbjct:  169 KGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGPAVIFNNDKAWDDQWIYWVGPFVGAAVAAIYHQYILRGSAIKALGSFRSN 286          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 3.259e-56
Identity = 106/117 (90.60%), Postives = 111/117 (94.87%), Query Frame = 3
Query:   12 KGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRS 362
            KG+ LGAEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNN+KAWDD WIFWVGP +GA AAA YHQ+ILRAAAIKALGSF S
Sbjct:  167 KGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPMIGAAAAAFYHQFILRAAAIKALGSFGS 283          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 3.259e-56
Identity = 105/118 (88.98%), Postives = 109/118 (92.37%), Query Frame = 3
Query:   12 KGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSN 365
            +G+ LGAEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIP+TGTGINPARS GAAVIYN DK WDDHWIFWVGP VGA  AA YHQYILRA AIKALGSFRSN
Sbjct:  172 RGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYNKDKPWDDHWIFWVGPLVGAAIAAFYHQYILRAGAIKALGSFRSN 289          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 1.239e-55
Identity = 102/118 (86.44%), Postives = 109/118 (92.37%), Query Frame = 3
Query:   12 KGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSN 365
            +G+ LGAEI+GTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIP+TGTGINPARS GAAV+YN DK WDDHWIFWVGP +GA  AA YHQYILRA AIKALGSFRSN
Sbjct:  174 RGAGLGAEIVGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNKDKPWDDHWIFWVGPLLGAAIAAFYHQYILRAGAIKALGSFRSN 291          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 1.239e-55
Identity = 105/118 (88.98%), Postives = 110/118 (93.22%), Query Frame = 3
Query:   12 KGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSN 365
            KG+ L AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS GAAVI+NN+KAW +HWIFWVGPFVGA  AA YHQYILRA AIKALGSFRSN
Sbjct:  172 KGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIFNNEKAWHNHWIFWVGPFVGAAIAAFYHQYILRAGAIKALGSFRSN 289          
BLAST of EY675339 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 2.336e-54
Identity = 101/118 (85.59%), Postives = 107/118 (90.68%), Query Frame = 3
Query:   15 GSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSNP 368
            G+ + AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVF+VHLATIPITGTGINPARS GAA+IYN DKAWD HWIFWVGPF GA  AA YHQ++LRA AIKALGSFRS P
Sbjct:  167 GTGVAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSLGAAIIYNKDKAWDHHWIFWVGPFAGAAIAAFYHQFVLRAGAIKALGSFRSQP 284          
The following BLAST results are available for this feature:
BLAST of EY675339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 117
Match NameE-valueIdentityDescription
PIP28_ARATH2.330e-6296.67Probable aquaporin PIP2-8 OS=Arabidopsis thaliana ... [more]
PIP27_ARATH5.740e-6193.39Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7... [more]
PIP1_ATRCA7.496e-6191.74Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1[more]
PIP26_ORYSJ9.791e-6194.17Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]
PIP27_MAIZE2.948e-5789.83Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]
PIP24_ARATH3.259e-5690.60Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ... [more]
PIP21_MAIZE3.259e-5688.98Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]
PIP22_MAIZE1.239e-5586.44Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]
PIP21_ORYSJ1.239e-5588.98Probable aquaporin PIP2-1 OS=Oryza sativa subsp. j... [more]
PIP25_ARATH2.336e-5485.59Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-009-C06-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675339 ID=EY675339; Name=EY675339; organism=Citrus sinensis; type=EST; length=1047bp
CCACGCGTCCGAAAGGATCAGCCTTGGGCGCTGAGATTATTGGTACCTTC
GTGCTTGTTTACACAGTCTTCTCGGCCACAGACCCCAAGAGAAGCGCTCG
TGACTCTCACGTGCCCGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGT
TCATGGTTCACTTGGCCACCATCCCCATCACTGGAACGGGCATCAACCCT
GCTAGGAGCTTTGGTGCTGCTGTTATCTACAACAATGACAAGGCCTGGGA
TGACCATTGGATCTTCTGGGTTGGTCCTTTCGTTGGAGCATTGGCTGCAG
CGGCATACCACCAGTACATCTTGAGGGCTGCTGCTATCAAGGCTTTGGGA
TCATTCCGCAGCAACCCTTCAAACTAAGAAAGCAAATTATGATGAAATAT
GAACCACCAACCAGAATAGCTTTATTTATCTCTTTTTCCTTTCTCTCTTT
CTGTTATTTGTTCCCTTGTGTCTATTATGAGATGATGTTTGCTATGATAA
TTAAGACCCTTCTCTTTATTTTTCCATTTCATATTTTTGGATTGAATTAC
CTAATACTTTTGTCCCCGTGAATCATTGGTAAATGAAAAAGGGGGGAAGG
TTTGGTTTATTCCCAAAAAAAAAAAAAAAAAAGGCCGGTACGCTCCTAAA
GGAATTCAAACCTTAACTTACCCCGTGCACTGGCAAAGTACATAACCCTT
TTAATAAGTGGCCCCCCAAAAATTTCATTTCAATTGGGCCGTTTTTTTTT
CTCCACTCCATGGACGGGGGAAAAAACCCTGGGTGTTTACCCCAAATTAT
AATCCCCCCTTGGGACACATACCCCCCCCTTTTCCCCAACGTGGGGAATA
AATAGCAAAAAAAAACCCCCGCACCATGAATCGCCCTCCTTCCACAAATT
TTTTGCCCACCCCCTATAAAAAGGGGAAAAAGAAGGGAAAACCCCCCCCT
CTTGTACAACAGGCCCCAATATTATAACGAAGGGGGGGTGGGGGGTGGGG
GGGGGGGAATGTATTAACCTCCCCAAAACAGGAGATGATGGCACGCA
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