EY675304
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY675304 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.382e-50 Identity = 93/100 (93.00%), Postives = 96/100 (96.00%), Query Frame = 1 Query: 58 EIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTDEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLSGN 357 EIRRWQDIKNPGSVNQDPIFKQYSLP EVGYPGGIFNPLNFAPT EAKEKE+ANGRLAMLAFLGFI+QHNVTGKGPF+NLLQHISDPWHNTIVQTL GN Sbjct: 153 EIRRWQDIKNPGSVNQDPIFKQYSLPAGEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHISDPWHNTIVQTLGGN 252
BLAST of EY675304 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 1.170e-49 Identity = 91/98 (92.86%), Postives = 94/98 (95.92%), Query Frame = 1 Query: 58 EIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTDEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLS 351 EIRRWQDIKNPGSVNQDPIFKQYSLP EVGYPGGIFNPLNFAPT EAKEKELANGRLAMLAFLGF+VQHNVTGKGPFENLLQH+SDPWHNTIVQT + Sbjct: 154 EIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHNTIVQTFN 251
BLAST of EY675304 vs. ExPASy Swiss-Prot
Match: CB120_HORVU (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 5.086e-45 Identity = 85/102 (83.33%), Postives = 92/102 (90.20%), Query Frame = 1 Query: 49 TTPEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTDEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLSG 354 T EIRRWQDIKNPGSVNQDPIFK YSLPP+E GYPG +FNPLNFAP E KEKELANGRLAMLAFLGF+VQHNV GKGPFENL QH++DPWHNTI+QT+SG Sbjct: 130 TYVEIRRWQDIKNPGSVNQDPIFKSYSLPPHECGYPGRVFNPLNFAPL-ENKEKELANGRLAMLAFLGFLVQHNVHGKGPFENLQQHLADPWHNTIIQTISG 230
BLAST of EY675304 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 2.152e-19 Identity = 52/104 (50.00%), Postives = 62/104 (59.62%), Query Frame = 1 Query: 58 EIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNF-----APTDEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLS 351 E RRW DI PG VN DPIF L +VGYPGG+ F+PL + A E + KE+ NGRLAMLA +G QH TG GP +NL H++DP H TI S Sbjct: 165 EGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFS 268
BLAST of EY675304 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 2.152e-19 Identity = 52/104 (50.00%), Postives = 62/104 (59.62%), Query Frame = 1 Query: 58 EIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGI-FNPLNF-----APTDEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLS 351 E RRW DI PG VN DPIF L +VGYPGG+ F+PL + A E + KE+ NGRLAMLA +G QH TG GP +NL H++DP H TI S Sbjct: 165 EGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFS 268
BLAST of EY675304 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 4.200e-15 Identity = 49/109 (44.95%), Postives = 65/109 (59.63%), Query Frame = 1 Query: 58 EIRRWQDIKNPGSVNQDPIFKQYSLP-------PNEVGYPGG-IFNPLNFAPTD----EAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTL 348 E RR+QD PGS+ KQY L + YPGG +FNPL F + E K KE+ NGRLAMLA LG+ +Q VTG GP++NLL H++DP +N ++ +L Sbjct: 167 EHRRFQDWAKPGSMG-----KQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNNVLTSL 270
BLAST of EY675304 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.222e-14 Identity = 49/109 (44.95%), Postives = 63/109 (57.80%), Query Frame = 1 Query: 58 EIRRWQDIKNPGSVNQDPIFKQYSLP-------PNEVGYPGG-IFNPLNFAPTD----EAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTL 348 E RR+QD PGS+ KQY L YPGG FNPL F + E K KE+ NGRLAMLA LG+ +Q VTG GP++NLL H++DP +N ++ +L Sbjct: 169 EHRRFQDWAKPGSMG-----KQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHVADPVNNNVLTSL 272
BLAST of EY675304 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.234e-14 Identity = 40/72 (55.56%), Postives = 48/72 (66.67%), Query Frame = 1 Query: 136 PNEVGYPGGIFNPLNF----APTDEAKEKELANGRLAMLAFLGFIVQHNV-TGKGPFENLLQHISDPWHNTI 336 P + YPGG F+PL F A +E K KE+ NGRLAMLAF+GF VQ + G GP ENL H++DPWHN I Sbjct: 162 PEKKKYPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNI 233 HSP 2 Score: 21.557 bits (44), Expect = 1.234e-14 Identity = 9/27 (33.33%), Postives = 16/27 (59.26%), Query Frame = 3 Query: 15 PTLFVIEFILFHYARDKKMARHKEPRK 95 PT+ IEF+ +A +++ K+P K Sbjct: 139 PTILAIEFLAIAFA-EQQRTMEKDPEK 164
BLAST of EY675304 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.494e-12 Identity = 36/72 (50.00%), Postives = 48/72 (66.67%), Query Frame = 1 Query: 151 YPGGIFNPLNFAPTDEA----KEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHISDPWHNTIVQTLSG 354 +PGG F+PL A E K KE+ NGRLAM A LGF +Q VTG+GP ENL +H+SDP+ N ++ ++G Sbjct: 201 HPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVIAG 272
BLAST of EY675304 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.494e-12 Identity = 36/67 (53.73%), Postives = 45/67 (67.16%), Query Frame = 1 Query: 151 YPGGIFNPLNF----APTDEAKEKELANGRLAMLAFLGFIVQHNV-TGKGPFENLLQHISDPWHNTI 336 YPGG F+PL + A +E K KE+ NGRLA+LA +GF VQ + G GP ENL H++DPWHN I Sbjct: 168 YPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLADPWHNNI 234 The following BLAST results are available for this feature:
BLAST of EY675304 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >EY675304 ID=EY675304; Name=EY675304; organism=Citrus sinensis; type=EST; length=958bpback to top |