EY675249

Overview
NameEY675249
Unique NameEY675249
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1070
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675249 vs. ExPASy Swiss-Prot
Match: ATB13_ARATH (Homeobox-leucine zipper protein ATHB-13 OS=Arabidopsis thaliana GN=ATHB-13 PE=2 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 2.273e-36
Identity = 85/130 (65.38%), Postives = 99/130 (76.15%), Query Frame = 2
Query:  215 MSCN-GMAFFPTNFMLQTPHEDEH--QTPTSLNPILPSCA-PQDFHGVASFLGKRSM--SFSGIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKNAVG*GLWGRNQEQVAI 586
            MSCN GM+FFP+NFM+QT +ED+H  Q+P SL P+LPSC+ PQD HG ASFLGKRS       ++ G   NGE+D+SDDGSQ GEKKRRLNMEQVKTLEKNFELGNKLEPERK  +   L G    Q+AI
Sbjct:    1 MSCNNGMSFFPSNFMIQTSYEDDHPHQSP-SLAPLLPSCSLPQDLHGFASFLGKRSPMEGCCDLETGNNMNGEEDYSDDGSQMGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL-GLQPRQIAI 128          
BLAST of EY675249 vs. ExPASy Swiss-Prot
Match: HOX21_ORYSI (Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. indica GN=HOX21 PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 4.446e-24
Identity = 79/168 (47.02%), Postives = 89/168 (52.98%), Query Frame = 2
Query:  215 MSCNGMA-----FFPTNFMLQT----------PHEDEHQ----------------------TPTSLNPILPSCAP----QDFHGVASFLGKRSMSFS-GIDAGEEANG--EDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKNAVG*GLWGRNQEQVAI 586
            M+ NGMA     FFP NF+L            P E  H                        P   NP LPS A     Q+F G+A  LGKR MS+  G   G+E NG  ED+ SDDGSQAGEKKRRLN+EQV+TLEKNFELGNKLEPERK  +   L G    QVAI
Sbjct:    1 MASNGMASSPSSFFPPNFLLHMAQQQAAPPHDPQEHHHHHHHGHHHEQQQHHHHLGPPPPPPPHPHNPFLPSSAQCPSLQEFRGMAPMLGKRPMSYGDGGGGGDEVNGGGEDELSDDGSQAGEKKRRLNVEQVRTLEKNFELGNKLEPERKMQLARAL-GLQPRQVAI 167          
BLAST of EY675249 vs. ExPASy Swiss-Prot
Match: HOX21_ORYSJ (Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. japonica GN=HOX21 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.206e-23
Identity = 79/174 (45.40%), Postives = 90/174 (51.72%), Query Frame = 2
Query:  215 MSCNGMA-----FFPTNFMLQTP-------------------------HEDEHQT-------------PTSLNPILPSCAP----QDFHGVASFLGKRSMSFS-GIDAGEEANG--EDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKNAVG*GLWGRNQEQVAI 586
            M+ NGMA     FFP NF+L                            HE + Q              P   NP LPS A     Q+F G+A  LGKR MS+  G   G+E NG  ED+ SDDGSQAGEKKRRLN+EQV+TLEKNFELGNKLEPERK  +   L G    QVAI
Sbjct:    1 MASNGMASSPSSFFPPNFLLHMAQQQAAPPHDPQEHHHHHHHGHHGHHHEQQQQQQHHHHLGPPPPPPPHPHNPFLPSSAQCPSLQEFRGMAPMLGKRPMSYGDGGGGGDEVNGGGEDELSDDGSQAGEKKRRLNVEQVRTLEKNFELGNKLEPERKMQLARAL-GLQPRQVAI 173          
BLAST of EY675249 vs. ExPASy Swiss-Prot
Match: ATB23_ARATH (Homeobox-leucine zipper protein ATHB-23 OS=Arabidopsis thaliana GN=ATHB-23 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 4.915e-23
Identity = 70/144 (48.61%), Postives = 86/144 (59.72%), Query Frame = 2
Query:  215 MSCN--GMAFFPTNFMLQTPHEDEHQTPTSLNPILPSCAPQDFHGVASFLGKRS-----MSFSGIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKNAVG*GLWGRNQEQVAILVPKQGKPEGKTK 625
            MSCN  G+AFFP NF LQ  H++E   P  L         QDFHG   FLGKRS       F  +D     NG++++SDDGS+ GEKKRRLNMEQ+K LEK+FELGNKLE +RK  +   L G    Q+AI    + +   KTK
Sbjct:    1 MSCNNNGLAFFPENFSLQNHHQEEEDHPQLL---------QDFHG---FLGKRSPMNNVQGFCNLDM----NGDEEYSDDGSKMGEKKRRLNMEQLKALEKDFELGNKLESDRKLELARAL-GLQPRQIAIWFQNR-RARSKTK 126          
BLAST of EY675249 vs. ExPASy Swiss-Prot
Match: HAT7_ARATH (Homeobox-leucine zipper protein HAT7 OS=Arabidopsis thaliana GN=HAT7 PE=2 SV=4)

HSP 1 Score: 90.8929 bits (224), Expect = 1.385e-17
Identity = 61/140 (43.57%), Postives = 79/140 (56.43%), Query Frame = 2
Query:  230 MAFFPTNFMLQTPHEDE-HQTPTSLNPILPSCAPQDFHGVA-SFLGKRSMSFSGI-----------------DAGEEANGEDDFSDDGSQA--GEKKRRLNMEQVKTLEKNFELGNKLEPERKNAVG*GLWGRNQEQVAI 586
            MAF    FM Q  HED  H  P+  +  LPSC P  F+G   +++  RSMSF+G+                 +  ++   ED+ SDDGS    GEKK+RLN+EQV+ LEK+FELGNKLEPERK  +   L G    Q+AI
Sbjct:   22 MAFPQHGFMFQQLHEDNAHHLPSPTS--LPSCPPHLFYGGGGNYMMNRSMSFTGVSDHHHLTQKSPTTTNNMNDQDQVGEEDNLSDDGSHMMLGEKKKRLNLEQVRALEKSFELGNKLEPERKMQLAKAL-GLQPRQIAI 158          
BLAST of EY675249 vs. ExPASy Swiss-Prot
Match: ATB20_ARATH (Homeobox-leucine zipper protein ATHB-20 OS=Arabidopsis thaliana GN=ATHB-20 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 3.086e-17
Identity = 56/122 (45.90%), Postives = 69/122 (56.56%), Query Frame = 2
Query:  230 MAFFPTNFMLQTPHEDEHQTPTSLNPILPSCAPQDFHGVASFLGKRSMSFSGIDAGEEAN-GEDDFSDDGSQA--GEKKRRLNMEQVKTLEKNFELGNKLEPERKNAVG*GLWGRNQEQVAI 586
            MAF    FM Q  HED  Q        LPSC P  F+G  +++  RSMS   +         E++ SDDG+    GEKK+RL +EQVK LEK+FELGNKLEPERK  +   L G    Q+AI
Sbjct:   16 MAFPQHGFMFQQLHEDNSQDQ------LPSCPPHLFNGGGNYMMNRSMSLMNVQEDHNQTLDEENLSDDGAHTMLGEKKKRLQLEQVKALEKSFELGNKLEPERKIQLAKAL-GMQPRQIAI 130          
The following BLAST results are available for this feature:
BLAST of EY675249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
ATB13_ARATH2.273e-3665.38Homeobox-leucine zipper protein ATHB-13 OS=Arabido... [more]
HOX21_ORYSI4.446e-2447.02Homeobox-leucine zipper protein HOX21 OS=Oryza sat... [more]
HOX21_ORYSJ2.206e-2345.40Homeobox-leucine zipper protein HOX21 OS=Oryza sat... [more]
ATB23_ARATH4.915e-2348.61Homeobox-leucine zipper protein ATHB-23 OS=Arabido... [more]
HAT7_ARATH1.385e-1743.57Homeobox-leucine zipper protein HAT7 OS=Arabidopsi... [more]
ATB20_ARATH3.086e-1745.90Homeobox-leucine zipper protein ATHB-20 OS=Arabido... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-008-B07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675249 ID=EY675249; Name=EY675249; organism=Citrus sinensis; type=EST; length=1070bp
CACCAATATTTGCATCCCCTTCCTACATAGAAATTGAAGAAGATTTAGTT
TACTTTACGATTCGTCAAGAGCTTATATTTGCACTTTTTTAAGTCCAGCT
CTATTAATTCCTCATCCTTCTTTCTCAAGTTTGAACATGACAGTAAGATC
ATTACCACAGTTCTTAAGCATATTGGTGGGAAAAGTTTAGCTTAAGCTAG
AGCTAGCTAAGGTCATGTCTTGCAATGGGATGGCTTTCTTCCCAACAAAT
TTCATGCTTCAAACTCCCCATGAAGATGAACATCAAACCCCCACTTCTCT
CAATCCAATTCTTCCCTCTTGTGCTCCCCAAGACTTTCATGGGGTTGCAT
CTTTCTTAGGGAAGCGATCAATGTCATTTTCAGGGATTGATGCGGGAGAA
GAAGCAAATGGGGAGGATGATTTTTCTGATGATGGATCACAAGCAGGAGA
GAAGAAGAGGAGGCTTAATATGGAACAAGTGAAGACTCTTGAGAAGAACT
TTGAATTGGGTAACAAGCTTGAGCCAGAGAGAAAAAATGCAGTTGGCTAG
GGGCTCTGGGGCCGCAACCAAGAACAGGTGGCTATTTTGGTTCCAAAACA
GGGAAAGCCAGAAGGGAAAACCAAGCCAGCTGGAGAAAAAATATGAATTT
TCTCAAGAAAAAAAAAGGAAGCAATTCAAAGCCCAATTGGCCGAAGCACT
TCCAAGGCCCAAAAATCAAAACCCTTCAGGGCAAGAGGTTTGGCCTGGGA
ATCCCTATTGAATTTATTTTTTAAAAAATTTAAAAAAGCTTGGGTAAGTT
TGGGGGGGGGGGGAAAAAGGGGGGAAAAATTAGAGGGGATGTTTCTCTTT
CAAATAAATTTTTAATAGGCCCCGTTTTTTTTCCCCCTTTGGAATATCCT
TGGAAAAAAAAAAAAGGGTGGGGGGAAAAAAGGGGGCCCTTTTTTTTTTT
TATAGAGGGGGTTTTTAAATAAAATTTTTTTTTTGAGGCCCTTTTTTTTT
TTATGTGGTGTTTATACCAAGGGTTGTTTTTTTATAAAAAAACAAAAACC
CCTCTTCTTTATTAAAAAAA
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