EY729085

Overview
NameEY729085
Unique NameEY729085
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729085 vs. ExPASy Swiss-Prot
Match: PLSC_ECOLI (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Escherichia coli (strain K12) GN=plsC PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.122e-37
Identity = 77/174 (44.25%), Postives = 104/174 (59.77%), Query Frame = 1
Query:   22 SCVIIANHQSNYDLFVFGTVVPYRTVCIGKKNLKWVPLFRQLFWLAGNVLIDRGNAHKARGSMLTTTHILAHADTSIWVFPESARNLGETLLPFKKSAFHIAIAAGVPIVHVCVXTYVKQMKLNRWNSGDILIRSLPPIPTKGLTMDDMPLLMQTCREPMRDCIEAMDRELQLR 543
            + + IANHQ+NYD+     +V   TV +GKK+L W+P F QL+WL GN+LIDR N  KA G++    +       SIW+FPE  R+ G  LLPFK  AFH AIAAGVPI+ VCV T   ++ LNR ++G +++  LPPI       D +  L   CR  M   I  +D+E+  R
Sbjct:   66 NAIYIANHQNNYDMVTASNIVQPPTVTVGKKSLLWIPFFGQLYWLTGNLLIDRNNRTKAHGTIAEVVNHFKKRRISIWMFPEGTRSRGRGLLPFKTGAFHAAIAAGVPIIPVCVSTTSNKINLNRLHNGLVIVEMLPPIDVSQYGKDQVRELAAHCRSIMEQKIAELDKEVAER 239          
BLAST of EY729085 vs. ExPASy Swiss-Prot
Match: PLSC_SALTY (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Salmonella typhimurium GN=plsC PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.376e-36
Identity = 75/174 (43.10%), Postives = 102/174 (58.62%), Query Frame = 1
Query:   22 SCVIIANHQSNYDLFVFGTVVPYRTVCIGKKNLKWVPLFRQLFWLAGNVLIDRGNAHKARGSMLTTTHILAHADTSIWVFPESARNLGETLLPFKKSAFHIAIAAGVPIVHVCVXTYVKQMKLNRWNSGDILIRSLPPIPTKGLTMDDMPLLMQTCREPMRDCIEAMDRELQLR 543
            + + IANHQ+NYD+     +V   TV +GKK+L W+P F QL+WL GN+LIDR N  KA  ++    +       SIW+FPE  R+ G  LLPFK  AFH AIAAGVPI+ VCV     ++ LNR N+G +++  LPP+       D +  L   CR  M   I  +D+E+  R
Sbjct:   66 NAIYIANHQNNYDMVTAANIVQPPTVTVGKKSLLWIPFFGQLYWLTGNLLIDRNNRAKAHSTIAAVVNHFKKRRISIWMFPEGTRSRGRGLLPFKTGAFHAAIAAGVPIIPVCVSNTSNKVNLNRLNNGLVIVEMLPPVDVSEYGKDQVRELAAHCRALMEQKIAELDKEVAER 239          
BLAST of EY729085 vs. ExPASy Swiss-Prot
Match: PLSC_SALTI (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Salmonella typhi GN=plsC PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.376e-36
Identity = 75/174 (43.10%), Postives = 102/174 (58.62%), Query Frame = 1
Query:   22 SCVIIANHQSNYDLFVFGTVVPYRTVCIGKKNLKWVPLFRQLFWLAGNVLIDRGNAHKARGSMLTTTHILAHADTSIWVFPESARNLGETLLPFKKSAFHIAIAAGVPIVHVCVXTYVKQMKLNRWNSGDILIRSLPPIPTKGLTMDDMPLLMQTCREPMRDCIEAMDRELQLR 543
            + + IANHQ+NYD+     +V   TV +GKK+L W+P F QL+WL GN+LIDR N  KA  ++    +       SIW+FPE  R+ G  LLPFK  AFH AIAAGVPI+ VCV     ++ LNR N+G +++  LPP+       D +  L   CR  M   I  +D+E+  R
Sbjct:   66 NAIYIANHQNNYDMVTAANIVQPPTVTVGKKSLLWIPFFGQLYWLTGNLLIDRNNRAKAHSTIAAVVNHFKKRRISIWMFPEGTRSRGRGLLPFKTGAFHAAIAAGVPIIPVCVSNTSNKVNLNRLNNGLVIVEMLPPVDVSEYGKDQVRELAAHCRALMEQKIAELDKEVAER 239          
BLAST of EY729085 vs. ExPASy Swiss-Prot
Match: PLSC_HAEIN (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Haemophilus influenzae GN=plsC PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.288e-34
Identity = 70/172 (40.70%), Postives = 100/172 (58.14%), Query Frame = 1
Query:   19 SSCVIIANHQSNYDLFVFGTVVPYRTVCIGKKNLKWVPLFRQLFWLAGNVLIDRGNAHKARGSMLTTTHILAHADTSIWVFPESARNLGETLLPFKKSAFHIAIAAGVPIVHVCVXTYVKQMKLNRWNSGDILIRSLPPIPTKGLTMDDMPLLMQTCREPMRDCIEAMDREL 534
            S  + I NHQ+NYD+     +V  RTV +GKK+L W+P F  L+W+ GN+ +DR N  KA  +M      +   + SIW+FPE  RN G  LLPFK  AFH AI+AGVPI+ V   +   ++ LNRW++G ++   + PI   G T D++  L   C + M   I  +D E+
Sbjct:   65 SRAIYIGNHQNNYDMVTISYMVQPRTVSVGKKSLIWIPFFGILYWVTGNIFLDRENRTKAHNTMSQLARRINEDNLSIWMFPEGTRNRGRGLLPFKTGAFHAAISAGVPIIPVVCSSTHNKINLNRWDNGKVICEIMDPIDVSGYTKDNVRDLAAYCHDLMEKRIAELDEEI 236          
BLAST of EY729085 vs. ExPASy Swiss-Prot
Match: PLCA_HUMAN (1-acyl-sn-glycerol-3-phosphate acyltransferase alpha OS=Homo sapiens GN=AGPAT1 PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 4.436e-27
Identity = 66/160 (41.25%), Postives = 87/160 (54.37%), Query Frame = 1
Query:   28 VIIANHQSNYDLFVFGTVVPYRTVCIGKKNLKWVPLFRQLFWLAGNVLIDRGNAHKARGSMLTTTHILAHADTSIWVFPESARNLGETLLPFKKSAFHIAIAAGVPIVHVCVXTY--VKQMKLNRWNSGDILIRSLPPIPTKGLTMDDMPLLMQTCREPM 501
            V+++NHQS+ DL     V+P R V I K+ L W        WLAG + IDR     A   M      L   D  +WVFPE  RN   ++LPFK+ AFH+A+ A VPIV + + +Y      K  R+ SG   +R LPP+PT+GLT DD+P L    R  M
Sbjct:   99 VVVSNHQSSLDLLGMMEVLPGRCVPIAKRELLWAGSAGLACWLAGVIFIDRKRTGDAISVMSEVAQTLLTQDVRVWVFPEGTRNHNGSMLPFKRGAFHLAVQAQVPIVPIVMSSYQDFYCKKERRFTSGQCQVRVLPPVPTEGLTPDDVPALADRVRHSM 258          
BLAST of EY729085 vs. ExPASy Swiss-Prot
Match: PLCA_BOVIN (1-acyl-sn-glycerol-3-phosphate acyltransferase alpha OS=Bos taurus GN=AGPAT1 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.755e-26
Identity = 65/160 (40.62%), Postives = 86/160 (53.75%), Query Frame = 1
Query:   28 VIIANHQSNYDLFVFGTVVPYRTVCIGKKNLKWVPLFRQLFWLAGNVLIDRGNAHKARGSMLTTTHILAHADTSIWVFPESARNLGETLLPFKKSAFHIAIAAGVPIVHVCVXTY--VKQMKLNRWNSGDILIRSLPPIPTKGLTMDDMPLLMQTCREPM 501
            V+++NHQS+ DL     V+P R V I K+ L W        WLAG + IDR     A   M      L   D  +WVFPE  RN   ++LPFK+ AFH+A+ A VPIV + + +Y      K  R+ SG   +R LPP+PT+GL  DD+P L    R  M
Sbjct:   99 VVVSNHQSSLDLLGMMEVLPGRCVPIAKRELLWAGSAGLACWLAGVIFIDRKRTGDAISVMSEVAQTLLTQDVRVWVFPEGTRNHNGSMLPFKRGAFHLAVQAQVPIVPIVMSSYQDFYCKKERRFTSGRCQVRVLPPVPTEGLKPDDVPALADRVRHSM 258          
BLAST of EY729085 vs. ExPASy Swiss-Prot
Match: PLCA_SHEEP (1-acyl-sn-glycerol-3-phosphate acyltransferase alpha OS=Ovis aries GN=AGPAT1 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.427e-25
Identity = 64/160 (40.00%), Postives = 85/160 (53.12%), Query Frame = 1
Query:   28 VIIANHQSNYDLFVFGTVVPYRTVCIGKKNLKWVPLFRQLFWLAGNVLIDRGNAHKARGSMLTTTHILAHADTSIWVFPESARNLGETLLPFKKSAFHIAIAAGVPIVHVCVXTY--VKQMKLNRWNSGDILIRSLPPIPTKGLTMDDMPLLMQTCREPM 501
            V+++NHQS+ DL     V+P   V I K+ L W        WLAG + IDR     A   M      L   D  +WVFPE  RN   ++LPFK+ AFH+A+ A VPIV + + +Y      K  R+ SG   +R LPP+PT+GL  DD+P L    R  M
Sbjct:   99 VVVSNHQSSLDLLGMMEVLPGHCVPIAKRELLWAGSAGLACWLAGVIFIDRKRTGDAISVMSEVAQTLLTQDVRVWVFPEGTRNHNGSMLPFKRGAFHLAVQAQVPIVPIVMSSYQDFYCKKERRFTSGRCQVRVLPPVPTEGLKPDDVPALADRVRHSM 258          
BLAST of EY729085 vs. ExPASy Swiss-Prot
Match: PLCA_MOUSE (1-acyl-sn-glycerol-3-phosphate acyltransferase alpha OS=Mus musculus GN=Agpat1 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.423e-25
Identity = 64/161 (39.75%), Postives = 87/161 (54.04%), Query Frame = 1
Query:   28 VIIANHQSNYDLFVFGTVVPYRTVCIGKKNLKWVPLFRQLFWLAGNVLIDRGNAHKARGSMLTTTHILAHADTSIWVFPESARNLGETLLPFKKSAFHIAIAAGVPIVHVCVXTY--VKQMKLNRWNS-GDILIRSLPPIPTKGLTMDDMPLLMQTCREPM 501
            V+++NHQS+ DL     V+P R V I K+ L W        WLAG + IDR     A   M      L   D  +WVFPE  RN   ++LPFK+ AFH+A+ A VPI+ + + +Y      K  R+ S G   +R LPP+ T+GLT DD+P L  + R  M
Sbjct:   96 VVVSNHQSSLDLLGMMEVLPDRCVPIAKRELLWAGSAGLACWLAGIIFIDRKRTGDAISVMSEVAQTLLTQDVRVWVFPEGTRNHNGSMLPFKRGAFHLAVQAQVPIIPIVMSSYQDFYSKKERRFTSPGRCQVRVLPPVSTEGLTPDDVPALADSVRHSM 256          
BLAST of EY729085 vs. ExPASy Swiss-Prot
Match: PLC2_CAEEL (Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase acl-2 OS=Caenorhabditis elegans GN=acl-2 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.336e-23
Identity = 63/175 (36.00%), Postives = 94/175 (53.71%), Query Frame = 1
Query:   28 VIIANHQSNYDLFVFGTVVPYRTVCIGKKNLKWVPLFRQLFWLAGNVLIDRGNAHKARGSMLTTTHILAHADTSIWVFPESARNLGETLLPFKKSAFHIAIAAGVPIVHVCVXTYVK-QMKLNRW--NSGDILIRSLPPIPTKGLTMDDMPLLMQTCREPMRDCIEAMDRELQLR 543
            V+I NHQS+ D+    ++ P   V + K+ L +VP F    + +  + IDR N  +A  S+      + + +  +WVFPE  RN     +PFKK AF+IA+ A +PI+ V    Y     K  R+  N G+++IR L  IPTKGLT+DD+  L   CR+ M    + +  E Q R
Sbjct:   93 VVICNHQSSLDILSMASIWPKNCVVMMKRILAYVPFFNLGAYFSNTIFIDRYNRERAMASVDYCASEMKNRNLKLWVFPEGTRNREGGFIPFKKGAFNIAVRAQIPIIPVVFSDYRDFYSKPGRYFKNDGEVVIRVLDAIPTKGLTLDDVSELSDMCRDVMLAAYKEVTLEAQQR 267          
BLAST of EY729085 vs. ExPASy Swiss-Prot
Match: PLCB_HUMAN (1-acyl-sn-glycerol-3-phosphate acyltransferase beta OS=Homo sapiens GN=AGPAT2 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 9.572e-22
Identity = 59/168 (35.12%), Postives = 87/168 (51.79%), Query Frame = 1
Query:    7 LSKPSSCVIIANHQSNYDLFVFGTVVPYRTVCIGKKNLKWVPLFRQLFWLAGNVLIDRGNAHKARGSMLTTTHILAHADTSIWVFPESARNLGETLLPFKKSAFHIAIAAGVPIVHVCVXTYVK--QMKLNRWNSGDILIRSLPPIPTKGLTMDDMPLLMQTCREPMR 504
            L +   CVI++NHQS  D+     V+P R V I K+ L ++     + +L G   I+R  +  A   M      +   +  +W++PE  RN    LLPFKK AF++A+ A VPIV V   ++      K   + SG + ++ L  IPT GLT  D+P L+ TC   MR
Sbjct:   86 LQEARPCVIVSNHQSILDMMGLMEVLPERCVQIAKRELLFLGPVGLIMYLGGVFFINRQRSSTAMTVMADLGERMVRENLKVWIYPEGTRNDNGDLLPFKKGAFYLAVQAQVPIVPVVYSSFSSFYNTKKKFFTSGTVTVQVLEAIPTSGLTAADVPALVDTCHRAMR 253          
The following BLAST results are available for this feature:
BLAST of EY729085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
PLSC_ECOLI2.122e-3744.251-acyl-sn-glycerol-3-phosphate acyltransferase OS=... [more]
PLSC_SALTY1.376e-3643.101-acyl-sn-glycerol-3-phosphate acyltransferase OS=... [more]
PLSC_SALTI1.376e-3643.101-acyl-sn-glycerol-3-phosphate acyltransferase OS=... [more]
PLSC_HAEIN1.288e-3440.701-acyl-sn-glycerol-3-phosphate acyltransferase OS=... [more]
PLCA_HUMAN4.436e-2741.251-acyl-sn-glycerol-3-phosphate acyltransferase alp... [more]
PLCA_BOVIN3.755e-2640.631-acyl-sn-glycerol-3-phosphate acyltransferase alp... [more]
PLCA_SHEEP1.427e-2540.001-acyl-sn-glycerol-3-phosphate acyltransferase alp... [more]
PLCA_MOUSE5.423e-2539.751-acyl-sn-glycerol-3-phosphate acyltransferase alp... [more]
PLC2_CAEEL1.336e-2336.00Putative 1-acyl-sn-glycerol-3-phosphate acyltransf... [more]
PLCB_HUMAN9.572e-2235.121-acyl-sn-glycerol-3-phosphate acyltransferase bet... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-012-D01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729085 ID=EY729085; Name=EY729085; organism=Citrus sinensis; type=EST; length=663bp
TCACTGCTCTCCAAGCCCAGCAGTTGCGTGATCATCGCCAACCATCAGTC
CAACTACGATCTCTTTGTGTTTGGCACAGTGGTGCCCTACCGCACGGTGT
GTATCGGCAAGAAAAACCTGAAGTGGGTACCGTTGTTCCGCCAGTTGTTC
TGGCTGGCGGGCAATGTGCTGATTGACCGGGGCAATGCGCACAAAGCGCG
GGGCTCGATGCTCACTACAACGCATATCTTGGCACATGCAGACACCTCTA
TCTGGGTGTTCCCCGAAAGCGCGCGCAACTTGGGTGAAACCCTGCTGCCG
TTCAAGAAAAGCGCGTTCCACATAGCGATCGCCGCGGGCGTGCCGATTGT
GCACGTGTGTGTCTNCACTTACGTGAAGCAGATGAAGCTCAACCGCTGGA
ACAGTGGCGATATTCTGATTCGTTCGCTGCCGCCGATTCCTACGAAGGGG
CTGACGATGGATGACATGCCGCTGTTAATGCAGACCTGCCGTGAGCCAAT
GCGCGATTGCATCGAAGCGATGGATCGCGAGCTGCAACTGCGCCTGTAAT
CACGGGTGAACCCGCCGAATTTGCTGACTCTGATTGGGCAGGGCAGCTAA
GCTGCCTGACATTTGTCATCTGCCATTCCAAGAGGAACCGACCACCCTAT
GGGTTAAATTGGT
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