EY675093

Overview
NameEY675093
Unique NameEY675093
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1003
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY675093 vs. ExPASy Swiss-Prot
Match: SAMH1_DANRE (SAM domain and HD domain-containing protein 1 OS=Danio rerio GN=samhd1 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.823e-16
Identity = 46/90 (51.11%), Postives = 62/90 (68.89%), Query Frame = 3
Query:  396 LFQLALKFIDTEQFQRLRDLKQLGVTHLVYPGAVHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIGNFDLQTGKLPGMLLEVGPGPFSSL 665
            L  L L FIDT QFQRLR +KQLG T+LV+PGA H+RFEHS+GV +LAG  ++ L + Q  EL I   D+   ++ G+  ++G GPFS +
Sbjct:  107 LHPLLLHFIDTPQFQRLRHIKQLGGTYLVFPGASHNRFEHSIGVGYLAGCLVKALNERQP-ELFITKQDILCVQIAGLCHDLGHGPFSHM 195          
BLAST of EY675093 vs. ExPASy Swiss-Prot
Match: SAMH1_CHICK (SAM domain and HD domain-containing protein 1 OS=Gallus gallus GN=SAMHD1 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 4.062e-16
Identity = 44/87 (50.57%), Postives = 62/87 (71.26%), Query Frame = 3
Query:  405 LALKFIDTEQFQRLRDLKQLGVTHLVYPGAVHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIGNFDLQTGKLPGMLLEVGPGPFSSL 665
            L ++ IDT QFQRLR +KQLG T+ V+PGA H+RFEHSLGV +LAG  +++LK+ Q  EL I   D+   ++ G+  ++G GPFS +
Sbjct:  122 LLVRIIDTPQFQRLRYIKQLGGTYFVFPGASHNRFEHSLGVGYLAGCLVRELKERQP-ELDITQRDILCVEIAGLCHDLGHGPFSHM 207          
BLAST of EY675093 vs. ExPASy Swiss-Prot
Match: SAMH1_DICDI (Protein SAMHD1 homolog OS=Dictyostelium discoideum GN=DDB_G0272484 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.865e-15
Identity = 44/83 (53.01%), Postives = 57/83 (68.67%), Query Frame = 3
Query:  411 LKFIDTEQFQRLRDLKQLGVTHLVYPGAVHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIGNFDLQTGKLPGMLLEVGPGPFS 659
            + FIDTEQFQRLRDLKQ+G T  V+P A HSRFEHS+GV  LAG  I ++K  Q  EL I   + +  ++ G+  ++G GPFS
Sbjct:   97 MDFIDTEQFQRLRDLKQVGTTSFVFPCASHSRFEHSIGVSHLAGKYIDRIKVTQP-ELEITEREQKFVRIAGLCHDLGHGPFS 178          
BLAST of EY675093 vs. ExPASy Swiss-Prot
Match: SAMH1_XENLA (SAM domain and HD domain-containing protein 1 OS=Xenopus laevis GN=samhd1 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 1.000e-14
Identity = 43/100 (43.00%), Postives = 64/100 (64.00%), Query Frame = 3
Query:  396 LFQLALKFIDTEQFQRLRDLKQLGVTHLVYPGAVHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIGNFDLQTGKLPGMLLEVGPGPFSSLV*TQVSPPGC 695
            L  L ++ IDT +FQRLR +KQLG ++ V+PGA H+RFEHS+GV +LAG  +Q L + Q  +L I   D+   ++ G+  ++G GPFS +   +  P  C
Sbjct:  125 LHPLLVRIIDTPEFQRLRYIKQLGGSYYVFPGASHNRFEHSIGVGYLAGCLVQALHERQP-DLQIDMRDMLCVQIAGLCHDLGHGPFSHMFDGRFMPLAC 223          
BLAST of EY675093 vs. ExPASy Swiss-Prot
Match: SAMH1_BOVIN (SAM domain and HD domain-containing protein 1 OS=Bos taurus GN=SAMHD1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.000e-14
Identity = 42/87 (48.28%), Postives = 60/87 (68.97%), Query Frame = 3
Query:  405 LALKFIDTEQFQRLRDLKQLGVTHLVYPGAVHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIGNFDLQTGKLPGMLLEVGPGPFSSL 665
            L ++ IDT QFQRLR +KQLG  + V+PGA H+RFEHSLGV +LAG  +++L + Q  EL I   D+   ++ G+  ++G GPFS +
Sbjct:  119 LLMRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGRLVRELSEKQP-ELQISERDILCVQIAGLCHDLGHGPFSHM 204          
BLAST of EY675093 vs. ExPASy Swiss-Prot
Match: SAMH1_MOUSE (SAM domain and HD domain-containing protein 1 OS=Mus musculus GN=Samhd1 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.706e-14
Identity = 42/87 (48.28%), Postives = 59/87 (67.82%), Query Frame = 3
Query:  405 LALKFIDTEQFQRLRDLKQLGVTHLVYPGAVHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIGNFDLQTGKLPGMLLEVGPGPFSSL 665
            L ++ IDT QFQRLR +KQLG  + V+PGA H+RFEHSLGV +LAG  ++ L + Q  EL I   D+   ++ G+  ++G GPFS +
Sbjct:  132 LLIRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGCLVRALAEKQP-ELQISERDILCVQIAGLCHDLGHGPFSHM 217          
BLAST of EY675093 vs. ExPASy Swiss-Prot
Match: SAMH1_HUMAN (SAM domain and HD domain-containing protein 1 OS=Homo sapiens GN=SAMHD1 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.911e-14
Identity = 43/90 (47.78%), Postives = 59/90 (65.56%), Query Frame = 3
Query:  396 LFQLALKFIDTEQFQRLRDLKQLGVTHLVYPGAVHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIGNFDLQTGKLPGMLLEVGPGPFSSL 665
            L  L ++ IDT QFQRLR +KQLG  + V+PGA H+RFEHSLGV +LAG  +  L + Q  EL I   D+   ++ G+  ++G GPFS +
Sbjct:  128 LHPLLVRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGCLVHALGEKQP-ELQISERDVLCVQIAGLCHDLGHGPFSHM 216          
BLAST of EY675093 vs. ExPASy Swiss-Prot
Match: YS48_CAEEL (Uncharacterized protein ZK177.8 OS=Caenorhabditis elegans GN=ZK177.8 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 1.106e-13
Identity = 43/84 (51.19%), Postives = 53/84 (63.10%), Query Frame = 3
Query:  414 KFIDTEQFQRLRDLKQLGVTHLVYPGAVHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIGNFDLQTGKLPGMLLEVGPGPFSSL 665
            K IDT +FQRLR LKQ G+ +LVYP   HSRF HSLG + LA A + KL+ +Q   L I   DL    +  +L +VG GPFS L
Sbjct:   62 KLIDTVEFQRLRHLKQTGLVYLVYPNCEHSRFVHSLGTFSLAYALVDKLRHSQP-SLNITESDLICTSVAALLHDVGHGPFSHL 144          
BLAST of EY675093 vs. ExPASy Swiss-Prot
Match: Y1154_METJA (Uncharacterized protein MJ1154 OS=Methanocaldococcus jannaschii GN=MJ1154 PE=4 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.944e-13
Identity = 36/90 (40.00%), Postives = 57/90 (63.33%), Query Frame = 3
Query:  390 LVLFQLALKFIDTEQFQRLRDLKQLGVTHLVYPGAVHSRFEHSLGVYWLAGAAIQKLKQNQGLELGIGNFDLQTGKLPGMLLEVGPGPFS 659
            + L +  L+ ID+E+FQRLR++KQ G+T+LVYP A H+RFEHSLG  ++A    +K+           N D++  ++  +L ++G  PFS
Sbjct:   12 IYLDEKELEIIDSEEFQRLRNIKQTGLTYLVYPSANHTRFEHSLGTMFIASKIAEKI-----------NADVELTRVSALLHDIGHPPFS 90          

HSP 2 Score: 21.1718 bits (43), Expect = 6.944e-13
Identity = 7/14 (50.00%), Postives = 11/14 (78.57%), Query Frame = 1
Query:  241 KNVHDNVHGNIYLD 282
            K + D++H +IYLD
Sbjct:    2 KVIRDSIHKDIYLD 15          
The following BLAST results are available for this feature:
BLAST of EY675093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
SAMH1_DANRE1.823e-1651.11SAM domain and HD domain-containing protein 1 OS=D... [more]
SAMH1_CHICK4.062e-1650.57SAM domain and HD domain-containing protein 1 OS=G... [more]
SAMH1_DICDI5.865e-1553.01Protein SAMHD1 homolog OS=Dictyostelium discoideum... [more]
SAMH1_XENLA1.000e-1443.00SAM domain and HD domain-containing protein 1 OS=X... [more]
SAMH1_BOVIN1.000e-1448.28SAM domain and HD domain-containing protein 1 OS=B... [more]
SAMH1_MOUSE1.706e-1448.28SAM domain and HD domain-containing protein 1 OS=M... [more]
SAMH1_HUMAN2.911e-1447.78SAM domain and HD domain-containing protein 1 OS=H... [more]
YS48_CAEEL1.106e-1351.19Uncharacterized protein ZK177.8 OS=Caenorhabditis ... [more]
Y1154_METJA6.944e-1340.00Uncharacterized protein MJ1154 OS=Methanocaldococc... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-005-H11-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675093 ID=EY675093; Name=EY675093; organism=Citrus sinensis; type=EST; length=1003bp
TAATTTTATTTTTTAATTCCCAGCGAATGATCGAATCGACAACGTGACAA
CTAAAATCAACCGCAAAAACAAAACCTAAGAACAGAGCTGTAGCAGCAGA
AGCCGATACTGAGAGCTGGTTGGTCTGCTGACGCTGACGTTGGCACTGAT
GCAATGGGCGCTTTCTTTAACGAAGAGCTCTCGTTCCCTCCGGTCCACGC
CAACTTTGCTTCGTCGCAAGAACAACTGATCAGATTCTCTAAAAACGTTC
ACGACAATGTTCACGGCAACATTTATCTCGACCCCGTCCGTAATTTCTAT
TATATTTTTTTTCTTATATTAAGCAATTTTGGCCACAAACATTCTGTGAA
TGTGAGTGAAGAAATTATGATTCTTTGTTATTGTATCGTCTTGTATTGTT
CCAGCTCGCTTTGAAGTTTATTGACACTGAGCAGTTTCAGAGGCTACGTG
ACCTTAAACAACTTGGTGTGACGCATTTGGTTTATCCGGGGGCAGTGCAT
TCTAGGTTTGAACACTCTCTTGGGGTGTACTGGCTTGCCGGTGCAGCTAT
TCAAAAGCTCAAACAGAACCAAGGTTTGGAACTTGGTATTGGAAACTTTG
ACCTCCAAACTGGGAAACTCCCAGGAATGCTACTTGAGGTCGGGCCTGGG
CCTTTTTCGTCCCTTGTTTGAACGCAAGTTTCTCCCCCCGGGTGTTTGGG
GGCTGCAAAGGGTCTCCAGGGACAAAATGTCTTTAAAAAGGGGTATATCT
ATACTTTAACAAACCCCCATATTTGTTTTTTATTTTTAAATTGGTTTAAA
AAATTAAAGGGGAGAAAGAATTTTTGTTAATTTTCTGAAATTCCCACCCC
CCCCCAAAAGGGGCCACGGGGGAAAAAGACTTTTTTTTTTTGGTGAAGAA
ATTTGTGTGTGGAAAGGGGGGGGGCAAAATAGAGGGGCTGTGTGGATGGG
GGGAGGAAAAATAATATTGTTTTAATAATATTTTTTTGTTGGCCGCCGCG
GGG
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