EY675092

Overview
NameEY675092
Unique NameEY675092
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY675092 vs. ExPASy Swiss-Prot
Match: YDCP_ECOLI (Uncharacterized protease ydcP OS=Escherichia coli (strain K12) GN=ydcP PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.706e-18
Identity = 48/114 (42.11%), Postives = 71/114 (62.28%), Query Frame = 2 
Query:    2 LLKTSAERRIGVSWAARLQEDRLELTVTSEEGISASVTLPGPFGVANKPEQALETLRDLLGQLGTTQYHATAIELDAPQAFFIPNSQLKALRREVIEALNEGRIQAHPRGRPPP 343
            L KTS+ERR+ V       +++L LT+TSEEG+S + TL G F  AN  E+A+  L+D L +LG T Y+A  ++++ P A F+PNS L   RRE  + L+  R+ ++ RG   P
Sbjct:  402 LTKTSSERRVAVDIELGGWQEQLILTLTSEEGVSITHTLDGQFDEANNAEKAMNNLKDGLAKLGQTLYYARDVQINLPGALFVPNSLLNQFRREAADMLDAARLASYQRGSRKP 515
The following BLAST results are available for this feature:
BLAST of EY675092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YDCP_ECOLI2.706e-1842.11Uncharacterized protease ydcP OS=Escherichia coli ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-005-H10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675092 ID=EY675092; Name=EY675092; organism=Citrus sinensis; type=EST; length=742bp
GCTACTGAAGACCTCCGCCGAGCGCCGTATCGGCGTGTCGTGGGCGGCTC
GCCTGCAGGAAGACCGCCTGGAACTGACCGTCACCAGCGAAGAAGGCATC
AGTGCCAGCGTTACCCTGCCCGGCCCGTTTGGCGTGGCCAACAAGCCGGA
ACAGGCCCTGGAAACCCTGCGCGACCTGCTGGGCCAACTGGGCACCACCC
AGTACCACGCCACCGCGATCGAGCTGGATGCACCACAGGCGTTCTTCATC
CCGAATTCGCAGCTCAAGGCCCTGCGTCGTGAAGTGATCGAGGCGCTGAA
CGAGGGGCGTATTCAGGCTCATCCACGGGGGCGGCCGCCTCCTAAAGGAT
TCCACCTTAACTACCCCGTGGCGGCAAACGTCCTAACCTCCTTCTTATAT
GTCCCCCTAAATTCAATTACTGGGGCCCGCGTTTTTAAACCGTCCGGGAT
GGGGAAAAAACCCTGGGCGTTTACCCAAATTATTCCCCCTTGACACCAAA
CCCCCCCTTTCCCCCAGCCGGGGGAAAAAAGAGAAAAAAGGCCCCCCCCC
CCATATCCCCCCCTCCCCCCACAGTTTTGCCCCCCCCCGAAAGGGGGGAG
AAGGGGGAAGCCCCCCCCGGTGAACGGGCGCGCCAAAATAAGAGGGGGGG
GGGGGGGGGGGGGGGGGGGTTGTTAACAGCATGAAGCGGAGGTGGGAACA
TTTTACAATTATATGTGTACACCCGCCGCACCACTAACTATT
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