EY675069

Overview
NameEY675069
Unique NameEY675069
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1023
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY675069 vs. ExPASy Swiss-Prot
Match: CPRF2_PETCR (Light-inducible protein CPRF2 OS=Petroselinum crispum GN=CPRF2 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 7.117e-25
Identity = 35/52 (67.31%), Postives = 40/52 (76.92%), Query Frame = 3 
Query:  471 DSVDDKRARRMLVNRESARRSRKRKQAHLNDLKTQAGSLRAELSSLLKGLTE 626
            D  D KR RRML NRESARRSR+RKQAH+ +L+TQ   LR E SSLLK LT+
Sbjct:  195 DPSDAKRVRRMLSNRESARRSRRRKQAHMTELETQVSQLRVENSSLLKRLTD 246

HSP 2 Score: 67.3958 bits (163), Expect = 7.117e-25
Identity = 41/97 (42.27%), Postives = 59/97 (60.82%), Query Frame = 2 
Query:  152 PVIPSSTAPVDSDEYRAYLKTKLDLACAAVAL-RTAPVKPEDKSSLIENQTQAAKPSELGSQ--------------------AMATADLPAVQARPA 379
            PV   +  PVDS++Y+AYLK++LDLACAAVAL R + +KP+D ++L++N +QA+  S+L SQ                    A AT  LPA+Q + A
Sbjct:   67 PVEIPANVPVDSEDYQAYLKSRLDLACAAVALTRASSLKPQDSAALLDNGSQASNTSQLVSQVPPKGSGHDLSKEEDKEALAATATPLLPALQKKSA 163
The following BLAST results are available for this feature:
BLAST of EY675069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CPRF2_PETCR7.117e-2567.31Light-inducible protein CPRF2 OS=Petroselinum cris... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-005-F02-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY675069 ID=EY675069; Name=EY675069; organism=Citrus sinensis; type=EST; length=1023bp
CCACGCGTCCGTTTCCTCTTCGTCGGCTAGCGACAATTCAGTTCCTGCAG
TTATTGGTCCTTCTGTTATGTCGAAATCAAGGGCTTATGAAATTGGAGAT
GATGACGTGGTGGAGATAAAAAAGTCTCATCGAGATCAATCTCTTGACCC
ACCGGTGATTCCTTCCTCAACGGCTCCGGTTGATTCCGATGAGTATCGAG
CTTATTTAAAAACCAAACTCGATCTAGCGTGCGCTGCTGTTGCTCTCAGG
ACAGCGCCTGTGAAGCCAGAAGATAAATCTTCTTTAATTGAGAATCAAAC
GCAGGCGGCCAAGCCTTCTGAGTTGGGATCCCAAGCTATGGCTACCGCTG
ACTTACCAGCTGTCCAGGCAAGACCAGCAGGCGCAAGTCAGGCAATCAAC
GAGTGGGTCATCGCGAGAAGATTCAGACGATGATGAGCTTGAAGGAGATA
CGGAAACCATAGAGGGTTTGGACTCGGTGGATGATAAACGTGCAAGAAGG
ATGCTGGTCAATCGAGAGTCAGCAAGACGCTCTAGGAAAAGAAAACAAGC
ACATCTGAATGATTTAAAAACACAGGCTGGGTCATTACGAGCCGAACTTT
CTTCGTTACTAAAAGGCCTGACCGAAGGGAAACCAAAAATATGGATGAAT
CCGCTGGCCAAAAACAAATAATTTGAAAGCCGGAATTGAGAACATTAAGA
GCAAAGGGGAAAATGGGTGAAAAAAACCGTTTAACCAATGGGGGGGGGTT
GAAACCCCCGGGTTTTAACCCGAAATCCAATGGGCCCGGGGGTTTGGGGA
CTGGGCCTTTAACACCACGCCCCCCCCCCCAAGGGGCGTCAAAAAAAAGG
CGAACTCCCACTCACAAGGGAAACCCAAAACCACAAAAACACTATTTTTT
TTTCTTCGCAGAGAATATTTCCTCAGGAATTATTTTAAAACCCCCCCCCC
CCCCCCCCTTAACAATCCACGCACACAGATTTTGTGGGAGGAACGGGAGC
GGTGTTTTGTTCTCCCCCGTATT
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