EY680142
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY680142 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 9.499e-59 Identity = 125/229 (54.59%), Postives = 157/229 (68.56%), Query Frame = 1 Query: 127 PLSFNGSGAATSVPSSSFFGTTLKKVSSRIPPSKVPSASFKITAEVDDNKQTKKDRWKGLAYDQSDDHQDITRGKGAVDSLFQAPMGTRTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGVYGEAKGKENHSNVNLFSPRWASTQL**LAEKLEKCQCWKNRQI*SGKGTGEAPKNYQKRKKCAIPLDK*ILKDGTGALRG 813 P + NGS ++ SVPSS+F G++LKKV+SR SKV S S +I A VD++KQT KDRWKGLA+D SDD QDITRGKG VDSLFQAP G+ TH+A+MSSY+YIS GLR YN DN MDG YIAPAFMDKLVVHITKNFM+LPN+KVPLILG++G KG+ L + + + A +LE + ++ + EA +K K CA+ ++ L G G L G Sbjct: 15 PPNLNGSSSSASVPSSTFLGSSLKKVNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKGLAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHITKNFMTLPNMKVPLILGIWG-GKGQGKSFQCELVFAKMRISPIMMSAGELESGNAGEPAKL-IRQRYREAADIIRKGKMCALFIND--LDAGAGRLGG 239
BLAST of EY680142 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 3.056e-57 Identity = 113/159 (71.07%), Postives = 134/159 (84.28%), Query Frame = 1 Query: 127 PLSFNGSGAATS-VPSSSFFGTTLKKVSSRIPPSKVPSASFKITA-EVDDNKQTKKDRWKGLAYDQSDDHQDITRGKGAVDSLFQAPMGTRTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGVY-GEAKGK 594 PLS NGSGA S VPS++FFG++LKK +++ P K S +FKI A E+ +++QT KD+WKGLAYD SDD QDITRGKG VD+LFQAPM + THYAVMSSYDYISQGLR YNLDN MDG YIAPAFMDKLVVHITKNF+SLPNIK+PLILG++ G+ +GK Sbjct: 15 PLSLNGSGARASLVPSTAFFGSSLKKSAAKFP--KASSGNFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGK 171 HSP 2 Score: 72.4034 bits (176), Expect = 3.889e-12 Identity = 39/64 (60.94%), Postives = 45/64 (70.31%), Query Frame = 3 Query: 570 GIWGGKGQGKSFQCELVFPKMGINPIIMIGRKIGKMPMLEKPPNLIRQRYR*GT*KLPKKEKMC 761 GIWGGKGQGKSFQCELVF KMGINPI+M ++ + +P LIRQRYR + KK KMC Sbjct: 162 GIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL-ESGNAGEPAKLIRQRYREAA-DIIKKGKMC 223
BLAST of EY680142 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 3.056e-57 Identity = 113/159 (71.07%), Postives = 134/159 (84.28%), Query Frame = 1 Query: 127 PLSFNGSGAATS-VPSSSFFGTTLKKVSSRIPPSKVPSASFKITA-EVDDNKQTKKDRWKGLAYDQSDDHQDITRGKGAVDSLFQAPMGTRTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGVY-GEAKGK 594 PLS NGSGA S VPS++FFG++LKK +++ P K S +FKI A E+ +++QT KD+WKGLAYD SDD QDITRGKG VD+LFQAPM + THYAVMSSYDYISQGLR YNLDN MDG YIAPAFMDKLVVHITKNF+SLPNIK+PLILG++ G+ +GK Sbjct: 15 PLSLNGSGARASLVPSTAFFGSSLKKSAAKFP--KASSGNFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGK 171 HSP 2 Score: 72.4034 bits (176), Expect = 3.889e-12 Identity = 39/64 (60.94%), Postives = 45/64 (70.31%), Query Frame = 3 Query: 570 GIWGGKGQGKSFQCELVFPKMGINPIIMIGRKIGKMPMLEKPPNLIRQRYR*GT*KLPKKEKMC 761 GIWGGKGQGKSFQCELVF KMGINPI+M ++ + +P LIRQRYR + KK KMC Sbjct: 162 GIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL-ESGNAGEPAKLIRQRYREAA-DIIKKGKMC 223
BLAST of EY680142 vs. ExPASy Swiss-Prot
Match: RCA_PHAVU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1 PE=2 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 4.879e-55 Identity = 110/160 (68.75%), Postives = 129/160 (80.62%), Query Frame = 1 Query: 130 LSFNGSGAATSVPSSSFFGTTLKKV-SSRIPPSKVPSASFKITA---EVDDNKQTKKDRWKGLAYDQSDDHQDITRGKGAVDSLFQAPMGTRTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGVY-GEAKGK 594 L+ NGSG S PSS+FFGT+LKKV SSR+P SK+ S SFKI A E+++ +QT+ DRW+GLAYD SDD QDITRGKG VDSLFQAPM THYAV+SS+ Y+S GLR YN DN DG YIAPAF+DKLVVHI KNFM+LPNIKVPLILGV+ G+ +GK Sbjct: 16 LNLNGSGGGASGPSSAFFGTSLKKVISSRVPNSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAYDVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDKLVVHIAKNFMTLPNIKVPLILGVWGGKGQGK 175 HSP 2 Score: 73.1738 bits (178), Expect = 2.280e-12 Identity = 39/64 (60.94%), Postives = 46/64 (71.88%), Query Frame = 3 Query: 570 GIWGGKGQGKSFQCELVFPKMGINPIIMIGRKIGKMPMLEKPPNLIRQRYR*GT*KLPKKEKMC 761 G+WGGKGQGKSFQCELVF KMGINPI+M ++ + +P LIRQRYR + L KK KMC Sbjct: 166 GVWGGKGQGKSFQCELVFAKMGINPIMMSAGEL-ESGNAGEPAKLIRQRYREAS-DLIKKGKMC 227
BLAST of EY680142 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 214.927 bits (546), Expect = 4.879e-55 Identity = 111/160 (69.38%), Postives = 131/160 (81.88%), Query Frame = 1 Query: 130 LSFNGSGAATSVPSSSFFGTTLKK-VSSRIPPSKVPSASFKITA---EVDDNKQTKKDRWKGLAYDQSDDHQDITRGKGAVDSLFQAPMGTRTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGVY-GEAKGK 594 L+ NGSGA S P+S+FFGT+LKK V+SR+P SKV + SFKI A E+++++QT KDRWKGLAYD SDD QDITRGKG VD LFQAPM THYAVMSSY+Y+S GLR LDN DG YIAPAF+DKLVVHITKNFM+LPNIKVPLILG++ G+ +GK Sbjct: 16 LNLNGSGAGASAPTSAFFGTSLKKAVASRVPNSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAYDISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLR--QLDNIKDGFYIAPAFLDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGK 173 HSP 2 Score: 70.8626 bits (172), Expect = 1.132e-11 Identity = 39/64 (60.94%), Postives = 44/64 (68.75%), Query Frame = 3 Query: 570 GIWGGKGQGKSFQCELVFPKMGINPIIMIGRKIGKMPMLEKPPNLIRQRYR*GT*KLPKKEKMC 761 GIWGGKGQGKSFQCELVF KMGINPI+M ++ + +P LIRQRYR L K KMC Sbjct: 164 GIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL-ESGNAGEPAKLIRQRYREAA-DLIAKGKMC 225
BLAST of EY680142 vs. ExPASy Swiss-Prot
Match: RCA1_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 7.045e-54 Identity = 109/161 (67.70%), Postives = 125/161 (77.64%), Query Frame = 1 Query: 127 PLSFNGSGAATSVPSSSFFGTTLKKVSSR-IPPSKVPSASFKITAE---VDDNKQTKKDRWKGLAYDQSDDHQDITRGKGAVDSLFQAPMGTRTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGVY-GEAKGK 594 PLS N S A TSVPS++FFG TLKKV + + KV + S +I AE VD KQT DRWKGL D SDD QDITRGKG VDSLFQAP GT TH+AV+ SY+Y+SQGLR YNLDN +DG YIAPAFMDKLVVHITKNF+ LPNIKVPLILG++ G+ +GK Sbjct: 15 PLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRIVAEQIDVDPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGK 175 HSP 2 Score: 69.707 bits (169), Expect = 2.521e-11 Identity = 37/64 (57.81%), Postives = 45/64 (70.31%), Query Frame = 3 Query: 570 GIWGGKGQGKSFQCELVFPKMGINPIIMIGRKIGKMPMLEKPPNLIRQRYR*GT*KLPKKEKMC 761 GIWGGKGQGKSFQCELVF KMGINPI+M ++ + +P LIRQRYR ++ +K MC Sbjct: 166 GIWGGKGQGKSFQCELVFRKMGINPIMMSAGEL-ESGNAGEPAKLIRQRYREAA-EIIRKGNMC 227
BLAST of EY680142 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 208.764 bits (530), Expect = 3.496e-53 Identity = 111/172 (64.53%), Postives = 132/172 (76.74%), Query Frame = 1 Query: 112 MAAAV---------PLSFNGSGA-ATSVPSSSFFGTTLKKVSSRIPPSKVPSASFKITAEVDDNKQTKKDRWKGLAYDQSDDHQDITRGKGAVDSLFQAPMGTRTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGVY-GEAKGK 594 MAAAV PLS NGSG+ A S P+S+F G + VS +K + SFK+ A V ++KQT DRW+GLAYD SDD QDITRGKG VDS+FQAPMGT TH+AV+SSY+Y+SQGLR YNLDN MDG YIAPAFMDKLVVHITKNF++LPNIKVPLILG++ G+ +GK Sbjct: 1 MAAAVSTVGAINRAPLSLNGSGSGAVSAPASTFLGKKVVTVSRFAQSNKKSNGSFKVLA-VKEDKQTDGDRWRGLAYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGK 171 HSP 2 Score: 70.8626 bits (172), Expect = 1.132e-11 Identity = 39/64 (60.94%), Postives = 44/64 (68.75%), Query Frame = 3 Query: 570 GIWGGKGQGKSFQCELVFPKMGINPIIMIGRKIGKMPMLEKPPNLIRQRYR*GT*KLPKKEKMC 761 GIWGGKGQGKSFQCELV KMGINPI+M ++ + +P LIRQRYR L KK KMC Sbjct: 162 GIWGGKGQGKSFQCELVMAKMGINPIMMSAGEL-ESGNAGEPAKLIRQRYREAA-DLIKKGKMC 223
BLAST of EY680142 vs. ExPASy Swiss-Prot
Match: RCA2_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 4.566e-53 Identity = 108/165 (65.45%), Postives = 125/165 (75.76%), Query Frame = 1 Query: 115 AAAVPLSFNGSGAATSVPSSSFFGTTLKKVSSR-IPPSKVPSASFKITAE---VDDNKQTKKDRWKGLAYDQSDDHQDITRGKGAVDSLFQAPMGTRTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGVY-GEAKGK 594 A PLS N S A TSVPS++FFG TLKKV + + KV + S +I AE D KQT DRWKGL D SDD QDI RGKG VDSLFQAP GT TH+AV+ SY+Y+SQGLR YN+DNT+DG YIAP+FMDKLVVHITKNF+ LPNIKVPLILGV+ G+ +GK Sbjct: 11 ANKAPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNRSLRIAAEEKDADPKKQTYSDRWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNMDNTLDGFYIAPSFMDKLVVHITKNFLKLPNIKVPLILGVWGGKGQGK 175 HSP 2 Score: 68.1662 bits (165), Expect = 7.334e-11 Identity = 33/51 (64.71%), Postives = 39/51 (76.47%), Query Frame = 3 Query: 570 GIWGGKGQGKSFQCELVFPKMGINPIIMIGRKIGKMPMLEKPPNLIRQRYR 722 G+WGGKGQGKSFQCELVF KMGINPI+M ++ + +P LIRQRYR Sbjct: 166 GVWGGKGQGKSFQCELVFRKMGINPIMMSAGEL-ESGNAGEPAKLIRQRYR 215
BLAST of EY680142 vs. ExPASy Swiss-Prot
Match: RCA_CUCSA (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.243e-50 Identity = 102/164 (62.20%), Postives = 124/164 (75.61%), Query Frame = 1 Query: 106 SLMAAAVPLSFNGSGAATSVPSSSFFGTTLKKVSSRIPPSKVPSASFKITAEVDDNKQTKKDRWKGLAYDQSDDHQDITRGKGAVDSLFQAPMGTRTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGVY-GEAKGK 594 S + A + N S VP+S+F G+ LK VSSR SK+ + +FKI AE D+ KQT+KD+W+GLA+D SDD QDITRGKG D LFQAPMGT TH AV+SSY+YIS GLR Y+ DN +DG YIAPAFMDKL VHI KNF++LPNIKVPLILGV+ G+ +GK Sbjct: 6 STIGAVNRTTLNNSNYGGLVPNSAFLGSRLK-VSSRFTTSKMVTGNFKIVAEQDEEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKGQGK 168 HSP 2 Score: 72.0182 bits (175), Expect = 5.079e-12 Identity = 38/64 (59.38%), Postives = 45/64 (70.31%), Query Frame = 3 Query: 570 GIWGGKGQGKSFQCELVFPKMGINPIIMIGRKIGKMPMLEKPPNLIRQRYR*GT*KLPKKEKMC 761 G+WGGKGQGKSFQCELVF KMGINPI+M ++ + +P LIRQRYR + KK KMC Sbjct: 159 GVWGGKGQGKSFQCELVFAKMGINPIMMSAGEL-ESGNAGEPAKLIRQRYREAA-DIIKKGKMC 220
BLAST of EY680142 vs. ExPASy Swiss-Prot
Match: RCA_SOLPN (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Solanum pennellii PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 2.121e-50 Identity = 101/162 (62.35%), Postives = 128/162 (79.01%), Query Frame = 1 Query: 115 AAAVPLSFNGSGAATSVPSSSFFGTTLKKVSSR-IPPSKVPSASFKITAEVDDNKQTKKDRWKGLAYDQSDDHQDITRGKGAVDSLFQAPMGTRTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGVY-GEAKGK 594 A+ PLS N S A TSVPS++FFG +LKKV ++ + KV + + ++ A+ D +TK+DRWKGL + SDD QDI RGKG VDSLFQAP GT TH+A+M+SY+Y+SQ L+TY LDN +DG YIAPAFMDKLVVHITKNF++LPNIKVPLILGV+ G+ +GK Sbjct: 11 ASKAPLSLNNSVAGTSVPSTAFFGKSLKKVYAKGVSSPKVSNRNLRVVAQEVD--ETKEDRWKGLYDNTSDDQQDIARGKGLVDSLFQAPTGTGTHHAIMNSYEYVSQALKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGVWGGKGQGK 170 HSP 2 Score: 69.3218 bits (168), Expect = 3.292e-11 Identity = 36/64 (56.25%), Postives = 45/64 (70.31%), Query Frame = 3 Query: 570 GIWGGKGQGKSFQCELVFPKMGINPIIMIGRKIGKMPMLEKPPNLIRQRYR*GT*KLPKKEKMC 761 G+WGGKGQGKSFQCELVF KMGINPI+M ++ + +P LIRQRYR ++ +K MC Sbjct: 161 GVWGGKGQGKSFQCELVFRKMGINPIMMSAGEL-ESGNAGEPAKLIRQRYREAA-EIIRKGNMC 222 The following BLAST results are available for this feature:
BLAST of EY680142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >EY680142 ID=EY680142; Name=EY680142; organism=Citrus sinensis; type=EST; length=891bpback to top |