EY704482

Overview
NameEY704482
Unique NameEY704482
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY704482 vs. ExPASy Swiss-Prot
Match: CML49_ARATH (Probable calcium-binding protein CML49 OS=Arabidopsis thaliana GN=CML49 PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 7.160e-75
Identity = 147/268 (54.85%), Postives = 175/268 (65.30%), Query Frame = 1
Query:  112 GYASH----------HGGPPSSQPYSAQYGAPPTAHPYSAQYGAPPTAQPYGARPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPFASLMPSTFPPGTDPNIVACFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELRGALMSLSFAVSPVVLDLLVTKFDKTGGESQAIEYDNFIECCLTG*GLTEKFRERELPTLDLQL-SLRDFMVAVPPF 882
            GY +H          +GG P    +   YG  P    +   YGAPP    YG+                                  PFASL+PS FPPGTDPNIVACFQ ADRDNSG IDDKELQGALSSYNQSFS+RTV LLMY FTN+N RKIGPKEF  +F SLQNWR++FE+ D+DRSG+ID+NELR ALMSL F+VSPV+LDLLV+KFDK+GG ++AIEYDNFIECCLT  GLTEKF+E++       + +  +FM+ V PF
Sbjct:   99 GYGAHPSSGPSDYGGYGGAPQQSGHGGGYGGAPQQSGHGGGYGAPPPQASYGS----------------------------------PFASLVPSAFPPGTDPNIVACFQAADRDNSGFIDDKELQGALSSYNQSFSIRTVHLLMYLFTNSNVRKIGPKEFTSLFFSLQNWRSIFERFDKDRSGRIDTNELRDALMSLGFSVSPVILDLLVSKFDKSGGRNRAIEYDNFIECCLTVKGLTEKFKEKDTALSGSAIFNYENFMLTVLPF 332          
BLAST of EY704482 vs. ExPASy Swiss-Prot
Match: CML50_ARATH (Probable calcium-binding protein CML50 OS=Arabidopsis thaliana GN=CML50 PE=2 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 2.815e-71
Identity = 149/285 (52.28%), Postives = 178/285 (62.46%), Query Frame = 1
Query:  118 ASHHGGPPSSQPYS---AQYGAPPTAHPYSAQYGAPPTA---------------QP------YGARP-----HXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPFASLMPSTFPPGTDPNIVACFQLADRDNSGLIDDKELQGALSSYNQSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELRGALMSLSFAVSPVVLDLLVTKFDKTGGESQAIEYDNFIECCLTG*GLTEKFRERELP-TLDLQLSLRDFMVAVPPF 882
            +S +G PP S PY+     Y  PP   PY   YGAPP +               QP      YGA P                                    +PFASL+PS F PGTDPNIVACFQ AD+D SG IDDKELQGALSSY Q FS+RTV LLMY FTN+NA KIGPKEF  +F+SLQNWR++FE+ D+DRSG+ID NELR AL+SL F+VSPVVLDLLV+KFDK+GG+++AIEYDNFIECCLT  GLTEKF+E++   +     +   FM+ V PF
Sbjct:   67 SSSYGAPPPSAPYAPSPGDYNKPPKEKPYGGGYGAPPPSGSSDYGSYGAGPRPSQPSGHGGGYGATPPHGVSDYGSYGGAPPRPASSGHGGGYGGYPPQASYGSPFASLIPSGFAPGTDPNIVACFQAADQDGSGFIDDKELQGALSSYQQRFSMRTVHLLMYLFTNSNAMKIGPKEFTALFYSLQNWRSIFERSDKDRSGRIDVNELRDALLSLGFSVSPVVLDLLVSKFDKSGGKNRAIEYDNFIECCLTVKGLTEKFKEKDTAYSGSATFNYESFMLTVLPF 351          
BLAST of EY704482 vs. ExPASy Swiss-Prot
Match: CML48_ARATH (Probable calcium-binding protein CML48 OS=Arabidopsis thaliana GN=CML48 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 4.256e-27
Identity = 72/175 (41.14%), Postives = 108/175 (61.71%), Query Frame = 1
Query:  370 FPPGTDPNIVACFQLADRDNSGLIDDKELQGALS-SYNQSFSLRTVRLLM--YTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELRGALMSLSFAVSPVVLDLLVTKFDKTGGESQAIEYDNFIECCLTG*GLTEKFRERELP-TLDLQLSLRDFMVAVPPF 882
            F P T P IV  F+ ADR+ SG +++ EL+ ALS S     S RT+RLL+  Y     +  ++GPKE++++++ L  WRA+F + DRDRSGK++S +LR A  +L   +   V  L+V++FD   G++  + +D+F+EC +   GLTEKFRE +   T    LS   FM+ V PF
Sbjct:   49 FSPETHPEIVRSFESADRNRSGFLEESELRQALSLSGYDGISNRTIRLLLFIYKIPVDSLLRLGPKEYVELWNCLAQWRAIFNRYDRDRSGKMNSTQLRDAFYNLGCVLPTSVHQLIVSQFDDGTGKTVDLCFDSFLECGMIVKGLTEKFRENDPGYTGYATLSYDVFMLMVIPF 223          
BLAST of EY704482 vs. ExPASy Swiss-Prot
Match: PEF1_DANRE (Peflin OS=Danio rerio GN=pef1 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.027e-26
Identity = 77/257 (29.96%), Postives = 120/257 (46.69%), Query Frame = 1
Query:  109 QGYASHHGGPPS-SQPYSAQYGAPPTAHPYSAQYGAPPTAQPYGA-RPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPFASL-MPSTFPPGTDPNIVACFQLADRDNSGLIDDKELQGALSSYNQS-FSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELRGALMSLSFAVSPVVLDLLVTKFDKTGGESQAIEYDNFIECCLTG*GLTEKFREREL-PTLDLQLSLRDFM 864
            QGY+   G  P   QP  A Y   P A  Y + YG+ P  Q YG   P+                               P+         PPG +P     F   D D SG I+ KEL+ AL ++N S F+  T  +++  F  T + ++    F  ++  LQ WRA F++ DRDRSG I++NE+  AL  + + +SP  +  LV ++   GG +  ++ D FI+ C     +T+ FRE++   T ++++S  DF+
Sbjct:    7 QGYSGPGGNAPQWQQPPRAPYAGGPAAGQYGSPYGSAPPGQQYGGGSPYGSYGQPGPRAPYGGGQAPGGPYGGYGQPQGGPYRQQGSAGNVPPGVNPEAYQWFSTVDSDQSGYINAKELKQALMNFNNSSFNDETCIMMLNMFDKTKSGRVDVFGFSALWTFLQQWRAAFQQFDRDRSGSINTNEMHQALSQMGYNLSPQFIQELVNRYSVRGG-TGVLQLDRFIQVCTQLQSMTQAFREKDTGMTGNVRMSYEDFL 262          
BLAST of EY704482 vs. ExPASy Swiss-Prot
Match: PEF1_XENLA (Peflin OS=Xenopus laevis GN=pef1 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.199e-21
Identity = 75/270 (27.78%), Postives = 121/270 (44.81%), Query Frame = 1
Query:  109 QGYASHHGGPPSSQPYSAQYGAPPTAHPY--SAQYGAPPTAQPYGARPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN-----PFASLMPSTF---------PPGTDPNIVACFQLADRDNSGLIDDKELQGALSSYN-QSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELRGALMSLSFAVSPVVLDLLVTKFDKTGGESQAIEYDNFIECCLTG*GLTEKFRERELPTL-DLQLSLRDFM 864
            QGY    G PP + P +  YG          +A YG P    PYG+ P                               +     P+ S    ++         PPG DP   + FQ  D D+SG I  KEL+ AL + N  SF+  T  ++M  F  +N+ +I    F  ++  +Q WR +F++ DRDRSG I+  EL  AL  + + +SP  + ++++++ +   +   ++ D FI+ C     +TE FRE++   +   +LS  DF+
Sbjct:    8 QGYHGAAGQPPGA-PQTNYYGGQQYGGGVQPAASYGRPAPGAPYGSPPSGGVYGHPVPGSAAPGAPGGPYGGQAPGGPYSVPGSTPYGSQQHGSYGQGAPAGNIPPGVDPEAFSWFQTVDTDHSGYISLKELKQALVNTNWSSFNDETCTMMMNMFDKSNSGRIDMFGFSALWRFIQQWRNLFQQYDRDRSGSINQGELHQALCQMGYQLSPQFVQIVMSRYAQRSAQ-PGLQLDRFIQICTQLQSMTEAFREKDTGQIGTAKLSYEDFI 275          
BLAST of EY704482 vs. ExPASy Swiss-Prot
Match: PEF1_MOUSE (Peflin OS=Mus musculus GN=Pef1 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.672e-21
Identity = 81/253 (32.02%), Postives = 113/253 (44.66%), Query Frame = 1
Query:  112 GYASHHGGPPSSQPYSAQYGAPPTAHPYSAQYGAPPTAQPYGARPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPFASLMPSTFPPGTDPNIVACFQLADRDNSGLIDDKELQGALSSYN-QSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELRGALMSLSFAVSPVVLDLLVTKFDKTGGESQAIEYDNFIECCLTG*GLTEKFRERELPTL-DLQLSLRDFM 864
            GY S  GG PS  P S  YG  P   PY    G  P   PYG +P                                          PP  DP   + FQ  D D+SG I  KEL+ AL + N  SF+  T  +++  F  T + +I    F  ++  LQ WR +F++ DRDRSG I S EL+ AL  + + +SP    LLV+++        A++ D FI+ C     LTE FRE++     +++LS  DF+
Sbjct:   56 GYPSA-GGVPSGTP-SGPYGGIPPGGPY----GQLPPGGPYGTQPGHYGQGGV----------------------------------PPNVDPEAYSWFQSVDADHSGYISLKELKQALVNSNWSSFNDETCLMMINMFDKTKSGRIDVAGFSALWKFLQQWRNLFQQYDRDRSGSISSTELQQALSQMGYNLSPQFTQLLVSRYCARSA-IPAMQLDCFIKVCTQLQVLTEAFREKDTAVQGNIRLSFEDFV 267          
BLAST of EY704482 vs. ExPASy Swiss-Prot
Match: PEF1_RAT (Peflin OS=Rattus norvegicus GN=Pef1 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.490e-21
Identity = 81/259 (31.27%), Postives = 116/259 (44.79%), Query Frame = 1
Query:  112 GYASHHGGPPSSQPYSAQYGAPPTAHPYSAQYGAPPTAQPYG-ARPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPFASLMPSTF-----PPGTDPNIVACFQLADRDNSGLIDDKELQGALSSYN-QSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELRGALMSLSFAVSPVVLDLLVTKFDKTGGESQAIEYDNFIECCLTG*GLTEKFRERELPTL-DLQLSLRDFM 864
            GY S  GG PS  P     G PP        YG  P   PYG A P                               +P+ +  P  +     PP  DP   + FQ  D D+SG I  KEL+ AL + N  SF+  T  +++  F  T   +I    F  ++  LQ W+ +F++ DRD SG I S EL+ AL  + + +SP    LLV+++  T     A++ D FI+ C     LTE FRE++     +++LS  DF+
Sbjct:   55 GYPSA-GGTPSGTPGGPYGGGPP-----GGPYGGGPPGGPYGQAHP-------------------------------SPYGTQPPGPYGQGGVPPNVDPEAYSWFQSVDADHSGYISLKELKQALVNSNWSSFNDETCLMMINMFDKTKTGRIDVVGFSALWKFLQQWKNLFQQYDRDHSGSISSTELQQALSQMGYNLSPQFTQLLVSRY-CTRSAIPAMQLDCFIKVCTQLQVLTEAFREKDTAVQGNIRLSFEDFV 275          
BLAST of EY704482 vs. ExPASy Swiss-Prot
Match: PEF1_HUMAN (Peflin OS=Homo sapiens GN=PEF1 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.490e-21
Identity = 73/261 (27.97%), Postives = 113/261 (43.30%), Query Frame = 1
Query:  127 HGGPPSSQPYSAQYGAPPTAHPYSAQYGAPPTAQPYGARPHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPFASLMPSTF-------------PPGTDPNIVACFQLADRDNSGLIDDKELQGALSSYN-QSFSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELRGALMSLSFAVSPVVLDLLVTKFDKTGGESQAIEYDNFIECCLTG*GLTEKFRERELPTL-DLQLSLRDFM 864
            +GGP    PY    G  P  HP    + +     PYG                                   P+    PS++             PP  DP   + FQ  D D+SG I  KEL+ AL + N  SF+  T  +++  F  T + +I    F  ++  +Q W+ +F++ DRDRSG I   EL+ AL  + + +SP    LLV+++      + A++ D FI+ C     LTE FRE++     +++LS  DF+
Sbjct:   46 YGGPAPGGPYGPPAGGGPYGHPNPGMFPSGTPGGPYGGAA-----------------------------PGGPYGQPPPSSYGAQQPGLYGQGGAPPNVDPEAYSWFQSVDSDHSGYISMKELKQALVNCNWSSFNDETCLMMINMFDKTKSGRIDVYGFSALWKFIQQWKNLFQQYDRDRSGSISYTELQQALSQMGYNLSPQFTQLLVSRYCPRSA-NPAMQLDRFIQVCTQLQVLTEAFREKDTAVQGNIRLSFEDFV 276          
BLAST of EY704482 vs. ExPASy Swiss-Prot
Match: PDCD6_MOUSE (Programmed cell death protein 6 OS=Mus musculus GN=Pdcd6 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.993e-17
Identity = 53/137 (38.69%), Postives = 77/137 (56.20%), Query Frame = 1
Query:  406 FQLADRDNSGLIDDKELQGALSSYNQS-FSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELRGALMSLSFAVSPVVLDLLVTKFDKTGGESQAIEYDNFIECCLTG*GLTEKFR 813
            FQ  D+D SG+I D ELQ ALS+   + F+  TVR ++  F   N   +   EF  V+  + +W+ +F   DRD SG ID NEL+ AL    + +S    D+L+ KFD+ G     I +D+FI+ C+    LT+ FR
Sbjct:   32 FQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQG--RGQIAFDDFIQGCIVLQRLTDIFR 166          
BLAST of EY704482 vs. ExPASy Swiss-Prot
Match: PDCD6_HUMAN (Programmed cell death protein 6 OS=Homo sapiens GN=PDCD6 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.215e-17
Identity = 53/137 (38.69%), Postives = 77/137 (56.20%), Query Frame = 1
Query:  406 FQLADRDNSGLIDDKELQGALSSYNQS-FSLRTVRLLMYTFTNTNARKIGPKEFIQVFHSLQNWRAMFEKVDRDRSGKIDSNELRGALMSLSFAVSPVVLDLLVTKFDKTGGESQAIEYDNFIECCLTG*GLTEKFR 813
            FQ  D+D SG+I D ELQ ALS+   + F+  TVR ++  F   N   +   EF  V+  + +W+ +F   DRD SG ID NEL+ AL    + +S    D+L+ KFD+ G     I +D+FI+ C+    LT+ FR
Sbjct:   32 FQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQG--RGQIAFDDFIQGCIVLQRLTDIFR 166          
The following BLAST results are available for this feature:
BLAST of EY704482 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
CML49_ARATH7.160e-7554.85Probable calcium-binding protein CML49 OS=Arabidop... [more]
CML50_ARATH2.815e-7152.28Probable calcium-binding protein CML50 OS=Arabidop... [more]
CML48_ARATH4.256e-2741.14Probable calcium-binding protein CML48 OS=Arabidop... [more]
PEF1_DANRE8.027e-2629.96Peflin OS=Danio rerio GN=pef1 PE=2 SV=1[more]
PEF1_XENLA1.199e-2127.78Peflin OS=Xenopus laevis GN=pef1 PE=2 SV=1[more]
PEF1_MOUSE2.672e-2132.02Peflin OS=Mus musculus GN=Pef1 PE=2 SV=1[more]
PEF1_RAT3.490e-2131.27Peflin OS=Rattus norvegicus GN=Pef1 PE=2 SV=1[more]
PEF1_HUMAN3.490e-2127.97Peflin OS=Homo sapiens GN=PEF1 PE=1 SV=1[more]
PDCD6_MOUSE3.993e-1738.69Programmed cell death protein 6 OS=Mus musculus GN... [more]
PDCD6_HUMAN5.215e-1738.69Programmed cell death protein 6 OS=Homo sapiens GN... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-033-C07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY704482 ID=EY704482; Name=EY704482; organism=Citrus sinensis; type=EST; length=887bp
CGAAGAAGCTTTACACACGTCGGCTCTCTCTTGAGATTCAGCAACATGTC
CGGCTATCCCCAACCTCCGCCCGGCTACGGCTACGGCTCCGCACAGCCTC
CGAGTTCTCAGGGCTACGCTTCCCATCACGGCGGGCCGCCGAGTTCTCAG
CCCTACTCTGCTCAGTACGGCGCGCCGCCGACGGCTCACCCCTACTCTGC
TCAGTACGGCGCACCGCCGACGGCTCAGCCCTACGGGGCACGGCCACACG
CGGCTCCGTCCGCACCCTCTTATGGCGGGCCTTCTGCGGCTCCTGCTTCT
GCTCCAGGCGGCTACCCGCCGGCTCCGGGATCGTACGGTAATCCGTTTGC
GTCCCTAATGCCGTCCACTTTTCCTCCCGGCACGGATCCGAACATCGTGG
CGTGCTTCCAGTTGGCCGACCGGGACAACAGCGGCCTCATCGACGATAAG
GAGTTGCAAGGAGCCTTGTCTTCTTACAATCAGAGCTTCAGCTTGAGAAC
CGTTCGTCTGCTTATGTACACATTCACCAACACTAACGCGAGAAAAATCG
GGCCTAAGGAGTTCATCCAAGTGTTTCACAGTCTTCAAAACTGGAGGGCC
ATGTTTGAGAAAGTGGACAGGGACAGGAGTGGAAAGATTGATTCGAATGA
GTTGCGGGGAGCTCTTATGAGTCTAAGTTTTGCGGTTTCACCCGTGGTAT
TGGACTTGCTTGTCACTAAGTTTGACAAAACTGGTGGGGAAAGCCAGGCC
ATTGAATATGATAACTTCATCGAGTGCTGTCTCACGGGTTAGGGGTTAAC
GGAGAAATTTAGGGAGAGGGAACTACCGACTCTGGATCTGCAACTTTCAC
TACGAGATTTCATGGTGGCTGTTCCGCCATTCTCATT
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