EY704476

Overview
NameEY704476
Unique NameEY704476
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY704476 vs. ExPASy Swiss-Prot
Match: CRD1_EUPES (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic OS=Euphorbia esula GN=CRD1 PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 6.417e-50
Identity = 88/96 (91.67%), Postives = 91/96 (94.79%), Query Frame = 1
Query:    1 LGLPDKS*EYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSV 288
            LG   K+ +YTFFKPKFIFYATYLSEKIGYWRYITIYRHLK NPE+QCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSV
Sbjct:  191 LGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKENPEYQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSV 286          

HSP 2 Score: 54.6842 bits (130), Expect = 2.152e-16
Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 1
Query:  598 VYVTMYLNDCQRTAFYEGIGLDTK 669
            VYVTMYLNDCQRTAFYEGIGLDTK
Sbjct:  286 VYVTMYLNDCQRTAFYEGIGLDTK 309          

HSP 3 Score: 51.9878 bits (123), Expect = 2.152e-16
Identity = 25/38 (65.79%), Postives = 29/38 (76.32%), Query Frame = 2
Query:  698 NRNTARIFPAVLDVENPEVKKKVDRMEKINRSSLLEGQ 811
            NR TARIFPAVLDVENPE K+K+DRM  IN+     G+
Sbjct:  320 NRTTARIFPAVLDVENPEFKRKLDRMVVINQKLQAVGE 357          
BLAST of EY704476 vs. ExPASy Swiss-Prot
Match: CRD1_ARATH (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic OS=Arabidopsis thaliana GN=CRD1 PE=2 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 1.867e-49
Identity = 87/96 (90.62%), Postives = 91/96 (94.79%), Query Frame = 1
Query:    1 LGLPDKS*EYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSV 288
            LG   K+ +YTFFKPKFIFYATYLSEKIGYWRYITIYRHLK NPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDW+AKLW+RFFCLSV
Sbjct:  195 LGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKENPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWQAKLWSRFFCLSV 290          
BLAST of EY704476 vs. ExPASy Swiss-Prot
Match: CRD1_GOSHI (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic OS=Gossypium hirsutum GN=CRD1 PE=2 SV=2)

HSP 1 Score: 195.667 bits (496), Expect = 3.185e-49
Identity = 86/96 (89.58%), Postives = 91/96 (94.79%), Query Frame = 1
Query:    1 LGLPDKS*EYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSV 288
            LG   K+ +YTFFKPKFIFYATYLSEKIGYWRYITIYRHLK NPE+QCYPIFKYFENWCQDENRHGDFFSAL+KAQPQFLNDWKAKLW+RFFCLSV
Sbjct:  191 LGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKENPEYQCYPIFKYFENWCQDENRHGDFFSALLKAQPQFLNDWKAKLWSRFFCLSV 286          
BLAST of EY704476 vs. ExPASy Swiss-Prot
Match: CRD1_HORVU (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic OS=Hordeum vulgare GN=CRD1 PE=1 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.696e-48
Identity = 85/98 (86.73%), Postives = 92/98 (93.88%), Query Frame = 1
Query:    1 LGLPDKS*EYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSVIL 294
            LG   K+ +YTFFKPKFIFYATYLSEKIGYWRYITI+RHLKANPE+Q YPIFKYFENWCQDENRHGDFFSAL+KAQPQFLNDWKAKLW+RFFCLSV +
Sbjct:  203 LGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIFRHLKANPEYQVYPIFKYFENWCQDENRHGDFFSALLKAQPQFLNDWKAKLWSRFFCLSVYI 300          

HSP 2 Score: 50.8322 bits (120), Expect = 1.850e-14
Identity = 21/24 (87.50%), Postives = 24/24 (100.00%), Query Frame = 1
Query:  598 VYVTMYLNDCQRTAFYEGIGLDTK 669
            VY+TMYLNDCQR+AFYEGIGL+TK
Sbjct:  298 VYITMYLNDCQRSAFYEGIGLNTK 321          

HSP 3 Score: 49.2914 bits (116), Expect = 1.850e-14
Identity = 24/38 (63.16%), Postives = 28/38 (73.68%), Query Frame = 2
Query:  698 NRNTARIFPAVLDVENPEVKKKVDRMEKINRSSLLEGQ 811
            NR TARIFPAV DVENPE K+K+DRM  IN   +  G+
Sbjct:  332 NRTTARIFPAVPDVENPEFKRKLDRMVDINLKIISIGE 369          
BLAST of EY704476 vs. ExPASy Swiss-Prot
Match: ACSF_TRIEI (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Trichodesmium erythraeum (strain IMS101) GN=acsF PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.808e-44
Identity = 85/131 (64.89%), Postives = 99/131 (75.57%), Query Frame = 1
Query:    1 LGLPDKS*EYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSVILHAL*TSVISHPTYISIG-SFCDYFHATLAATIE 390
            LG   KS +YTFFKPKFIFYATYLSEKIGYWRYITIYRHL+A+PE + YPIF++FENWCQDENRHGDFF A+M+A+P+FLNDW+AKLW RFF LSV        +     Y SIG + CDY    +  T E
Sbjct:  150 LGFLTKSRKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLEAHPEDRIYPIFRFFENWCQDENRHGDFFDAIMRARPEFLNDWQAKLWCRFFLLSVFATMYLNDIQRADFYASIGLNACDYDKYVIEKTNE 280          
BLAST of EY704476 vs. ExPASy Swiss-Prot
Match: ACSF3_ANASP (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 3 OS=Anabaena sp. (strain PCC 7120) GN=acsF3 PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.172e-43
Identity = 81/115 (70.43%), Postives = 91/115 (79.13%), Query Frame = 1
Query:    1 LGLPDKS*EYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSVILHAL*TSVISHPTYISIG 345
            LG   KS  YTFFKPKFIFYATYLSEKIGYWRYITIYRHL+A+PE + YPIF++FENWCQDENRHGDFF A+MK+QPQ LNDWKAKLW+RFF LSV        +     Y +IG
Sbjct:  150 LGFLTKSRNYTFFKPKFIFYATYLSEKIGYWRYITIYRHLEAHPEDRIYPIFRFFENWCQDENRHGDFFDAIMKSQPQMLNDWKAKLWSRFFLLSVFATMYLNDIQRKDFYATIG 264          
BLAST of EY704476 vs. ExPASy Swiss-Prot
Match: CTH1_CHLRE (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 2, chloroplastic OS=Chlamydomonas reinhardtii GN=CTH1 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.887e-42
Identity = 73/98 (74.49%), Postives = 88/98 (89.80%), Query Frame = 1
Query:    1 LGLPDKS*EYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSVIL 294
            LG   K+ +YTFFKPKFIFYATYLSEKIGYWRYI+IYRHL+ NP+ Q YP+F+YFENWCQDENRHGDFF+A++KA+P+ +NDW AKLW+RFFCLSV +
Sbjct:  193 LGFLTKNRKYTFFKPKFIFYATYLSEKIGYWRYISIYRHLQRNPDNQLYPLFEYFENWCQDENRHGDFFTAVLKARPEMVNDWAAKLWSRFFCLSVYI 290          
BLAST of EY704476 vs. ExPASy Swiss-Prot
Match: ACSF_PORYE (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Porphyra yezoensis GN=acsF PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.887e-42
Identity = 75/96 (78.12%), Postives = 85/96 (88.54%), Query Frame = 1
Query:    1 LGLPDKS*EYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSV 288
            LG   KS +YTFF PKFIFYATYLSEKIGYWRYITIYRHL+ +PE + YPIF++FENWCQDENRHGDFF+AL+K+QP FLNDWKAK+W RFF LSV
Sbjct:  141 LGFLTKSRKYTFFSPKFIFYATYLSEKIGYWRYITIYRHLEQHPEHRIYPIFRFFENWCQDENRHGDFFAALLKSQPHFLNDWKAKMWCRFFLLSV 236          
BLAST of EY704476 vs. ExPASy Swiss-Prot
Match: ACSF_PORPU (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase OS=Porphyra purpurea GN=acsF PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.097e-41
Identity = 74/96 (77.08%), Postives = 84/96 (87.50%), Query Frame = 1
Query:    1 LGLPDKS*EYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSV 288
            LG   K+ +YTFF PKFIFYATYLSEKIGYWRYITIYRH++  PE + YPIFK+FENWCQDENRHGDFF+AL+K+QP FLNDWKAK+W RFF LSV
Sbjct:  141 LGFLTKTRKYTFFSPKFIFYATYLSEKIGYWRYITIYRHMEQYPEHRIYPIFKFFENWCQDENRHGDFFAALLKSQPHFLNDWKAKMWCRFFLLSV 236          
BLAST of EY704476 vs. ExPASy Swiss-Prot
Match: ACSF1_SYNY3 (Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase 1 OS=Synechocystis sp. (strain PCC 6803) GN=acsF1 PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.444e-41
Identity = 76/96 (79.17%), Postives = 82/96 (85.42%), Query Frame = 1
Query:    1 LGLPDKS*EYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKANPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWKAKLWARFFCLSV 288
            LG   KS +YTFFKPKFIFYATYLSEKIGYWRYITIYRHL+ NP    YPIF++FENWCQDENRHGDFF A+M+AQP  LNDWKAKLW RFF LSV
Sbjct:  150 LGFLTKSRKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLEKNPNDCIYPIFEFFENWCQDENRHGDFFDAIMRAQPHTLNDWKAKLWCRFFLLSV 245          
The following BLAST results are available for this feature:
BLAST of EY704476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
CRD1_EUPES6.417e-5091.67Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
CRD1_ARATH1.867e-4990.63Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
CRD1_GOSHI3.185e-4989.58Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
CRD1_HORVU2.696e-4886.73Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_TRIEI1.808e-4464.89Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF3_ANASP1.172e-4370.43Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
CTH1_CHLRE2.887e-4274.49Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_PORYE2.887e-4278.13Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF_PORPU1.097e-4177.08Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]
ACSF1_SYNY32.444e-4179.17Magnesium-protoporphyrin IX monomethyl ester [oxid... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-033-C01-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY704476 ID=EY704476; Name=EY704476; organism=Citrus sinensis; type=EST; length=919bp
CTTGGGCTTCCTGACAAAAGCTAGGAATACACATTTTTCAAGCCAAAGTT
TATCTTTTATGCCACATATTTATCTGAGAAGATTGGATACTGGAGATACA
TTACCATATACAGACATCTCAAGGCCAACCCTGAGTTCCAATGTTATCCC
ATTTTCAAGTATTTCGAGAACTGGTGCCAGGATGAGAACCGTCACGGTGA
TTTCTTCTCAGCCTTGATGAAGGCACAACCCCAGTTCCTCAATGACTGGA
AGGCAAAGTTGTGGGCCCGATTTTTCTGCCTCTCGGTAATCCTTCATGCT
TTATGAACATCAGTTATATCTCACCCAACTTATATAAGCATTGGCTCTTT
TTGTGATTATTTTCATGCTACTTTGGCTGCAACCATAGAAAGAAAGCACA
AACAGGATATTGATGGAGGTTTTGAAAATCTTGTAAGGTTGATTGCTATC
ATGTTTAGGTTTGTGAAACCTAATGTAAGATCTTGTAATTGCATGCTAAA
TGTGTTTCTTATAAGTCGCATGACATAAAGGATACTTTTCTTAGGTATCA
GTAAGTCATATATTCTTCTCCTGATAATTTCATAATTGTCCCTGCAAGTG
TATGTCACAATGTATCTCAATGACTGCCAGCGTACTGCTTTCTATGAGGG
CATTGGACTAGACACAAAGAATTTGACATGCATGTCATCATTGAGACAAT
CGCAACACGGCTAGAATTTTCCCTGCTGTGCTGGATGTTGAAAACCCAGA
AGTCAAGAAGAAGGTGGATCGGATGGAAAAGATCAACAGAAGCTCCTTGC
TTGAGGGGCAACCGATGACATCCCTTGGGGGAAGACTTGAAAAGGATTCC
CCTGATTGCGCCCTGGCTTCTAACCTCGGCTAATATCTATGGCCCCGNTG
ACTCTGGATTGTTGTTTTG
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