EY674967

Overview
NameEY674967
Unique NameEY674967
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1046
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_IDILO (3-ketoacyl-CoA thiolase OS=Idiomarina loihiensis GN=fadI PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.376e-38
Identity = 94/211 (44.55%), Postives = 133/211 (63.03%), Query Frame = -1
Query:   48 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLP---RNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDDLI-----SPYRG-LARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRTGETAA 653
            ++++AV     +  G I  GIAGG+D++   PIG+++ + R L+  N+AK  G +   L      + FK LLP      E  TGLSMG+  E+MAK   I R  QDELT+ SHQ+  AA++ G+  D +      PY+  L+RDNN+R D+ +EKLA L P +DR++G++TA NSTPLTDGAS V++ +E+ A E GLPVL YLR+   AA
Sbjct:  102 SFQSAVNIAEAMVAGHIRGGIAGGADSSSVLPIGVSKRMARALVDLNKAKTLGQRFSILK----RLGFKDLLPVPPAVAEYSTGLSMGQTAEQMAKTHNISREDQDELTVRSHQKAHAAWEAGWLSDEVMTAYPEPYKKHLSRDNNIRGDSQIEKLAKLKPVFDRKHGSVTAANSTPLTDGASAVMMMTESRAKELGLPVLGYLRSYAFAA 308          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_PECCP (3-ketoacyl-CoA thiolase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=fadI PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 4.003e-38
Identity = 90/203 (44.33%), Postives = 128/203 (63.05%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPY-RGLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       I  G +EVGIAGG+D++   PIG++++L RTL+  N+A+  G KLK L G+RP     P+ P   E  TGL MG+  E+MAK + I R  QDEL   SH+    A++ G   D      + PY + L+ DNN+R D++LE+ + L PA+DR++GT+TA NSTPLTDGA+ VL+ SE+ A   GL  L YLR+
Sbjct:  102 SFQAVANVAESIMAGTVEVGIAGGADSSSVLPIGVSKALARTLVDMNKARTLGQKLKLLSGLRPKDLL-PVAPAVAEYSTGLRMGDTAEQMAKTYGITREEQDELAHRSHKLAAQAWESGVLRDEVMTAYVPPYEKALSEDNNVRHDSALEQYSRLRPAFDRRHGTVTAANSTPLTDGAAAVLMMSESRAKSLGLTPLGYLRS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_ERWCT (3-ketoacyl-CoA thiolase OS=Erwinia carotovora subsp. atroseptica GN=fadI PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.521e-37
Identity = 88/203 (43.35%), Postives = 128/203 (63.05%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPY-RGLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       I  G +EVGIAGG+D++   PIG++++L RTL+  N+A+  G KL+ L G+RP     P+ P   E  TGL MG+  E+MAK + I R  QDEL   SH+    A++ G   D      + PY + L+ DNN+R D+++E+ + L PA+DR++GT+TA NSTPLTDGA+ VL+ SE+ A   GL  L YLR+
Sbjct:  102 SFQAVANVAESIMAGTVEVGIAGGADSSSVLPIGVSKALARTLVDMNKARTLGQKLRLLSGLRPKDLL-PVAPAVAEYSTGLRMGDTAEQMAKTYGITREEQDELAHRSHKLAAQAWESGVLRDEVMTAYVPPYEKALSEDNNVRHDSAIEQYSRLRPAFDRRHGTVTAANSTPLTDGAAAVLMMSESKAKSLGLTPLGYLRS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_YERPY (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=fadI PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.859e-37
Identity = 88/203 (43.35%), Postives = 125/203 (61.58%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYR-GLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       I  G +++ IAGG+D++   PIG++++L RTL+ AN+A+    KLK    +R      P+ P   E  TGL MG+  E+MAK + I R  QD L L SHQ    A++QG+  D      I PYR  +  DNN+R D++L + A L PA+DRQ+G++TA NSTPLTDGA+ VL+ SE+ A   GLP L YLR+
Sbjct:  102 SFQAVANVAESIIAGSVDIAIAGGADSSSVLPIGVSKALARTLVDANKARSLSQKLKLFSRLRLRDLL-PVAPAVAEYSTGLRMGDTAEQMAKTYGISREDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYREAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_YERPS (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis GN=fadI PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.859e-37
Identity = 88/203 (43.35%), Postives = 125/203 (61.58%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYR-GLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       I  G +++ IAGG+D++   PIG++++L RTL+ AN+A+    KLK    +R      P+ P   E  TGL MG+  E+MAK + I R  QD L L SHQ    A++QG+  D      I PYR  +  DNN+R D++L + A L PA+DRQ+G++TA NSTPLTDGA+ VL+ SE+ A   GLP L YLR+
Sbjct:  102 SFQAVANVAESIIAGSVDIAIAGGADSSSVLPIGVSKALARTLVDANKARSLSQKLKLFSRLRLRDLL-PVAPAVAEYSTGLRMGDTAEQMAKTYGISREDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYREAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_YERPP (3-ketoacyl-CoA thiolase OS=Yersinia pestis (strain Pestoides F) GN=fadI PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.859e-37
Identity = 88/203 (43.35%), Postives = 125/203 (61.58%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYR-GLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       I  G +++ IAGG+D++   PIG++++L RTL+ AN+A+    KLK    +R      P+ P   E  TGL MG+  E+MAK + I R  QD L L SHQ    A++QG+  D      I PYR  +  DNN+R D++L + A L PA+DRQ+G++TA NSTPLTDGA+ VL+ SE+ A   GLP L YLR+
Sbjct:  102 SFQAVANVAESIIAGSVDIAIAGGADSSSVLPIGVSKALARTLVDANKARSLSQKLKLFSRLRLRDLL-PVAPAVAEYSTGLRMGDTAEQMAKTYGISREDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYREAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_YERPN (3-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=fadI PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.859e-37
Identity = 88/203 (43.35%), Postives = 125/203 (61.58%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYR-GLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       I  G +++ IAGG+D++   PIG++++L RTL+ AN+A+    KLK    +R      P+ P   E  TGL MG+  E+MAK + I R  QD L L SHQ    A++QG+  D      I PYR  +  DNN+R D++L + A L PA+DRQ+G++TA NSTPLTDGA+ VL+ SE+ A   GLP L YLR+
Sbjct:  102 SFQAVANVAESIIAGSVDIAIAGGADSSSVLPIGVSKALARTLVDANKARSLSQKLKLFSRLRLRDLL-PVAPAVAEYSTGLRMGDTAEQMAKTYGISREDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYREAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_YERPE (3-ketoacyl-CoA thiolase OS=Yersinia pestis GN=fadI PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.859e-37
Identity = 88/203 (43.35%), Postives = 125/203 (61.58%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYR-GLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       I  G +++ IAGG+D++   PIG++++L RTL+ AN+A+    KLK    +R      P+ P   E  TGL MG+  E+MAK + I R  QD L L SHQ    A++QG+  D      I PYR  +  DNN+R D++L + A L PA+DRQ+G++TA NSTPLTDGA+ VL+ SE+ A   GLP L YLR+
Sbjct:  102 SFQAVANVAESIIAGSVDIAIAGGADSSSVLPIGVSKALARTLVDANKARSLSQKLKLFSRLRLRDLL-PVAPAVAEYSTGLRMGDTAEQMAKTYGISREDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYREAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_YERPB (3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=fadI PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.859e-37
Identity = 88/203 (43.35%), Postives = 125/203 (61.58%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYR-GLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       I  G +++ IAGG+D++   PIG++++L RTL+ AN+A+    KLK    +R      P+ P   E  TGL MG+  E+MAK + I R  QD L L SHQ    A++QG+  D      I PYR  +  DNN+R D++L + A L PA+DRQ+G++TA NSTPLTDGA+ VL+ SE+ A   GLP L YLR+
Sbjct:  102 SFQAVANVAESIIAGSVDIAIAGGADSSSVLPIGVSKALARTLVDANKARSLSQKLKLFSRLRLRDLL-PVAPAVAEYSTGLRMGDTAEQMAKTYGISREDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYREAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRS 303          
BLAST of EY674967 vs. ExPASy Swiss-Prot
Match: FADI_YERPA (3-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=fadI PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 9.859e-37
Identity = 88/203 (43.35%), Postives = 125/203 (61.58%), Query Frame = -1
Query:   63 AWKAAVLGGNQIALGQIEVGIAGGSDTTPDAPIGINESLRRTLLSANRAKGTGAKLKALMGVRPSMFFKPLLPRNGEPRTGLSMGEHCEEMAKRWQIKRLAQDELTLTSHQRLDAAYKQGFFDD-----LISPYR-GLARDNNLRADTSLEKLAGLSPAYDRQNGTLTAGNSTPLTDGASVVLLASEAWAAERGLPVLAYLRT 653
            +++A       I  G +++ IAGG+D++   PIG++++L RTL+ AN+A+    KLK    +R      P+ P   E  TGL MG+  E+MAK + I R  QD L L SHQ    A++QG+  D      I PYR  +  DNN+R D++L + A L PA+DRQ+G++TA NSTPLTDGA+ VL+ SE+ A   GLP L YLR+
Sbjct:  102 SFQAVANVAESIIAGSVDIAIAGGADSSSVLPIGVSKALARTLVDANKARSLSQKLKLFSRLRLRDLL-PVAPAVAEYSTGLRMGDTAEQMAKTYGISREDQDALALRSHQLAAEAWQQGWLHDEVMTAYIPPYREAIIEDNNIRKDSTLAQYAKLRPAFDRQHGSVTAANSTPLTDGAAAVLMMSESKAKALGLPPLGYLRS 303          
The following BLAST results are available for this feature:
BLAST of EY674967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
FADI_IDILO1.376e-3844.553-ketoacyl-CoA thiolase OS=Idiomarina loihiensis G... [more]
FADI_PECCP4.003e-3844.333-ketoacyl-CoA thiolase OS=Pectobacterium carotovo... [more]
FADI_ERWCT1.521e-3743.353-ketoacyl-CoA thiolase OS=Erwinia carotovora subs... [more]
FADI_YERPY9.859e-3743.353-ketoacyl-CoA thiolase OS=Yersinia pseudotubercul... [more]
FADI_YERPS9.859e-3743.353-ketoacyl-CoA thiolase OS=Yersinia pseudotubercul... [more]
FADI_YERPP9.859e-3743.353-ketoacyl-CoA thiolase OS=Yersinia pestis (strain... [more]
FADI_YERPN9.859e-3743.353-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Ant... [more]
FADI_YERPE9.859e-3743.353-ketoacyl-CoA thiolase OS=Yersinia pestis GN=fadI... [more]
FADI_YERPB9.859e-3743.353-ketoacyl-CoA thiolase OS=Yersinia pseudotubercul... [more]
FADI_YERPA9.859e-3743.353-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Ant... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-004-A10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674967 ID=EY674967; Name=EY674967; organism=Citrus sinensis; type=EST; length=1046bp
CCCGTGCGGTTCCGGGTCCGGGAATTCCCGGGTCGACGAAATTCACCTGC
TGCGGTTTCACCGGTTCGCAAATAAGCCAAAACCGGCAAGCCACGTTCGG
CAGCCCATGCCTCGCTGGCCAGCAGCACCACCGAGGCGCCATCGGTCAGG
GGCGTGGAGTTGCCGGCGGTGAGCGTGCCGTTCTGGCGGTCGTAGGCCGG
GGACAGGCCGGCGAGTTTCTCCAGGCTGGTGTCGGCCCGCAGGTTGTTGT
CCCGGGCCAGGCCGCGATACGGGCTGATCAAATCATCGAAGAAACCCTGC
TTGTAGGCCGCGTCCAACCGTTGGTGGCTGGTGAGGGTCAGTTCGTCCTG
GGCCAGGCGCTTGATCTGCCAACGCTTGGCCATTTCTTCACAGTGTTCAC
CCATGGACAGGCCAGTACGCGGTTCGCCATTGCGCGGCAGCAGCGGCTTG
AAGAACATCGACGGACGCACGCCCATCAAGGCCTTCAACTTGGCGCCGGT
GCCCTTGGCGCGGTTGGCTGAAAGCAACGTGCGGCGCAAGGACTCGTTGA
TGCCGATGGGCGCGTCGGGAGTGGTGTCGGAACCGCCGGCAATGCCCACT
TCGATCTGCCCAAGGGCGATCTGGTTTCCCCCCAGCACCGCCGCCTTCCA
GGCCCGTGGCCGCAGGCTTGGTTGCAGGGTCTAAGGCCGGGGGTTTCGGG
GAGAAAAACGTGGTGGGACACGCAGGCTCTCCCCGGGGCCGGTTTGAAAT
CCCGGGGGATGGGTTGATTTCCCCGTCCCCGGCGGCAAAATTCCCCCCCC
AGGCCCAAGGCGCGGGAAAGTTTGTAACCGTATTCTCCAAAACTCTTTGA
TGGGGGGGGCCCACACAAAAAAACATCTTGGTGCGGCTTCCCTGGGGCAA
AAAGCCCCATTTTTGGGGAAGACGGGGACAAACACAGTAAATAGTGGTGG
TGTCCTCTCCAAATAAATTTCCCTCGCCTACGGTCACGGGGGTGGTTGGG
GTGGGACGGTGGGACTGGATTAAAATAAAGATAATGTAATATTCAA
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