EY674940

Overview
NameEY674940
Unique NameEY674940
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length993
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY674940 vs. ExPASy Swiss-Prot
Match: GMHB_PSEAE (D,D-heptose 1,7-bisphosphate phosphatase OS=Pseudomonas aeruginosa GN=gmhB PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.608e-15
Identity = 38/54 (70.37%), Postives = 47/54 (87.04%), Query Frame = -1 
Query:   76 LIILDRDGVINQDSDAFVKSPDEWIALPGSLQAIARLTQADWTVVVATNQSGLA 237
            L+ILDRDGVIN DSD ++K+ DEWI +P S++AIARL+QA WTV VATNQSG+A
Sbjct:    5 LLILDRDGVINLDSDDYIKTLDEWIPIPSSIEAIARLSQAGWTVAVATNQSGIA 58
[Close]
BLAST of EY674940 vs. ExPASy Swiss-Prot
Match: GMHB_NEIMB (D,D-heptose 1,7-bisphosphate phosphatase OS=Neisseria meningitidis serogroup B GN=gmhB PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 9.911e-15
Identity = 40/55 (72.73%), Postives = 46/55 (83.64%), Query Frame = -1 
Query:   79 VKLIILDRDGVINQDSDAFVKSPDEWIALPGSLQAIARLTQADWTVVVATNQSGL 243
            +KLIILDRDGVINQD D FVKS DEWI + GS+ A+A LTQA +TV VATNQSG+
Sbjct:    1 MKLIILDRDGVINQDRDDFVKSVDEWIPVEGSMDAVAFLTQAGYTVAVATNQSGI 55
[Close]
BLAST of EY674940 vs. ExPASy Swiss-Prot
Match: GMHB_NEIMA (D,D-heptose 1,7-bisphosphate phosphatase OS=Neisseria meningitidis serogroup A GN=gmhB PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 9.911e-15
Identity = 40/55 (72.73%), Postives = 46/55 (83.64%), Query Frame = -1 
Query:   79 VKLIILDRDGVINQDSDAFVKSPDEWIALPGSLQAIARLTQADWTVVVATNQSGL 243
            +KLIILDRDGVINQD D FVKS DEWI + GS+ A+A LTQA +TV VATNQSG+
Sbjct:    1 MKLIILDRDGVINQDRDDFVKSVDEWIPVEGSMDAVAFLTQAGYTVAVATNQSGI 55
The following BLAST results are available for this feature:
BLAST of EY674940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
GMHB_PSEAE2.608e-1570.37D,D-heptose 1,7-bisphosphate phosphatase OS=Pseudo... [more]
GMHB_NEIMB9.911e-1572.73D,D-heptose 1,7-bisphosphate phosphatase OS=Neisse... [more]
GMHB_NEIMA9.911e-1572.73D,D-heptose 1,7-bisphosphate phosphatase OS=Neisse... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-E02-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674940 ID=EY674940; Name=EY674940; organism=Citrus sinensis; type=EST; length=993bp
TTCCGCCGGCCGCGGCCAGCTCCCCCCTCATCTTGGTGTGGATGGCGGTC
AGCGTGTCCATGTCCCCCGGCCACGGGCCAGGCCCGACTGGTTGGTGGCG
ACCACCACCGTCCAGTCCGCCTGGGTCAGGCGGGCGATGGCCTGCAGGCT
GCCGGGCAGGGCGATCCATTCGTCGGGACTTTTGACGAAGGCGTCGCTGT
CCTGGTTGATGACGCCGTCGCGGTCGAGGATGATGAGCTTCACTGTGCCA
GCCTGGAAATGTCAGCGACCTGTTTCATCAGGGTGTGCAGCTGGCCCATC
AGCGCCAGCCGGTTGGCGCGCACCGCCGGGTCTTCGGCCATGACCATGAT
GTCGGCGAAGAAGGCGTCCACCGGACTCGCGCGCCTGCACCACGGTGCGC
AGGTTGGCCGGCTAAATCTCCGGCTGCCAATTGCTCCTCGGCCCTGCGGG
CGCAACTCGGCGATGGCGGCGGCCAACTCCTTTTCGGCGGGCTCTACCAG
GGGCGGCGACTTTGTCCGCTGCCGATTTCGCCTCGGGCCTTCTTGTACAT
GTTGACTTAAATACCTTGTTTGGTGCTATTTTTTATTGAATCCCTGCTTA
ACGTAAACGTGCTTTGCTATGATATAATACTCTTCTTTGATTGTCCTCTA
AATTTCATTTCTAAGTGATTGTCGATTTTACCATTTTTTGTCTCTGGAAA
ACCCAATGTACTTAATCAACTTTTAACATCCCAATTATACACAAAACCCC
CCCTTTTCCAACGCTTAGTAATATTAATCTTAAAAGACCCCCATCTTCAG
ATTGTCTATCTTCCATATTTTTTTACAACACCTTTTAAACATAATAATGT
GGACTCCACTATATTTTTAACAACTTTATTAATTACCATATTATCCTATG
TGTATTTTTGTTCCTTTATTTCACTCTTCTATTGTATTTTATCTGCTATA
TTTCAAGCAATCTTTCACTACCTCAGTTCTTCTGTTATCATAC
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