EY674937

Overview
NameEY674937
Unique NameEY674937
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1043
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY674937 vs. ExPASy Swiss-Prot
Match: FBPB_ACTPL (Ferric transport system permease protein fbpB OS=Actinobacillus pleuropneumoniae GN=fbpB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 9.885e-13
Identity = 48/140 (34.29%), Postives = 71/140 (50.71%), Query Frame = -1 
Query:    6 LRMLSFVPMAVPGLVLGLGYVFFFNLNGNPLHVLYGTMTLLVVCTIAHYLXXXXXXXXXALRQLDAEFEAAALSLKAPLYRHYLRVTVPICLPALLDIVRYLFVSAMTTVSAAIFLYSPDTILAAVAVLNMDDAGNVGGA 425
            L  L+ +  AVPG V G+ Y+  FN    P+++  GT  ++++  +   L          L QLD   + A+LSLK    +    +  P+  PALL  +   FV AMTTVSA +FL + DT +A   +LN  + G  G A
Sbjct:  515 LEFLTMLCFAVPGTVAGVSYILAFN--DAPMYIT-GTGIIIIISMVMRDLPIGMRAAIAGLGQLDKSLDEASLSLKGSSLKTIWFIVFPLLKPALLSALVTSFVRAMTTVSAIVFLVTADTRVATAYILNRVEDGEYGVA 651
[Close]
BLAST of EY674937 vs. ExPASy Swiss-Prot
Match: FBPB1_HAEIN (Putative ferric transport system permease protein fbpB 1 OS=Haemophilus influenzae GN=fbpB1 PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.864e-11
Identity = 44/122 (36.07%), Postives = 65/122 (53.28%), Query Frame = -1 
Query:   63 ALRMLSFVPMAVPGLVLGLGYVFFFNLNGNPLHVLYGTMTLLVVCTIAHYLXXXXXXXXXALRQLDAEFEAAALSLKAPLYRHYLRVTVPICLPALLDIVRYLFVSAMTTVSAAIFLYSPDT 428
            +L  L+ +  AVPG V G+ Y+  FN    PL++  GT  ++++  +   L          L QLD   + A+LSLK   ++    + +P+  PALL  +   FV AMTTVSA IFL + DT
Sbjct:  466 SLEFLTMLCFAVPGTVAGVSYILAFN--NAPLYIT-GTGIIVIISMVMRDLPIGMRAAIAGLGQLDKSLDEASLSLKGSSWKTLCFIVLPLLKPALLSALVTSFVRAMTTVSAIIFLVTADT 584
The following BLAST results are available for this feature:
BLAST of EY674937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
FBPB_ACTPL9.885e-1334.29Ferric transport system permease protein fbpB OS=A... [more]
FBPB1_HAEIN1.864e-1136.07Putative ferric transport system permease protein ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-D10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674937 ID=EY674937; Name=EY674937; organism=Citrus sinensis; type=EST; length=1043bp
GCCGCCGCGCCGCCGACGTTGCCGGCGTCGTCCATGTTCAGCACGGCGAC
TGCCGCGAGGATGGTGTCGGGGCTGTAGAGGAAGATCGCGGCGGAGACGG
TGGTCATCGCCGAGACGAACAGGTAGCGCACGATGTCCAGCAACGCCGGC
AGGCAGATCGGCACGGTGACCCGCAGGTAATGCCGGTACAGCGGCGCCTT
GAGGGACAATGCGGCGGCTTCGAACTCGGCGTCCAACTGACGCAGGGCCG
TGGTGGCGGTCATTTGTGCGGTGGTCAAATAGTGAGCAATGGTGCACACC
ACCAGCAGCGTCATGGTGCCGTAGAGCACATGCAGCGGGTTGCCGTTGAG
GTTGAAAAAGAACACGTAGCCCAGGCCCAGCACCAACCCTGGCACCGCCA
TCGGCACGAAGCTGAGCATGCGCAGCGCTAGGTTCAGGCCCTTCTGGCCC
TTGGTCTTTTCCATCAGGTAGGCGGCCGGTAAAGATCAGCACGCTGCCGA
TCAACGCGGTGCACAGGGCCATGGTGATGCTGTTGCGGTAGGCCAGCCAA
CCGCCGCCGGCCGTGGCCTCAAACTGGGTATGGGCCAGGGACAGCGACAG
GGTGTAGGGCCAAAACTTTCCCCAGCGACCAGTAAACCGCCATGCCCGAA
CACCAGCAACCGGATCCGCGCAAAATAGCAGGGACATGGGCCAAATTGCC
ACCCTTCCCCCCATTTCCAACGGGGCCCGGTTGGGAACCTTGGGGCGCCG
GGCCCCCTCTTAAAGGAATTCCCAGCCTTTACATTACCCCGTGGCTGCCC
ACGTCCAAAGCTCTTTCTAAAGTGGGCCCCCTAAATTCACTTTCTCCGGG
GCCGGGCGTTTTTAAAATCCCTTGGGGGAGGGGGGGAAAAAACCCCGGGG
GGTTTCCCCCCCAATTATATTCCCCCCTTTGGGCAACCACAATCCCCCCC
CTTTTTTCCCCCCCCGGGGGGGGGAATATAAAGAGAAAAAAAGAGGGCGC
CCGGCCACCCCTATTGTTTCTCCCCCCCCTCTCTCCTCTCACT
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