EY674935

Overview
NameEY674935
Unique NameEY674935
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1062
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674935 vs. ExPASy Swiss-Prot
Match: FBPB_ACTPL (Ferric transport system permease protein fbpB OS=Actinobacillus pleuropneumoniae GN=fbpB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 4.118e-14
Identity = 61/187 (32.62%), Postives = 93/187 (49.73%), Query Frame = -2
Query:   48 GGWLAYRNSITMALCTALIGSVLIFTGAYLMEKT--KGQKGLNLALRMLSFVPMAVPGLVLGLGYVFFFNLNGNPLHVLYGTMTLLVVCTIAHYLXXXXXXXXXALRQLDAEFEAAALSLKAPLYRHYLRVTVPICLPALLDIVRYLFVSAMTTVSAAIFLYSPDTILAAVAVLNMDDAGNVGGAAA 602
            G W +  N++  A   A + ++     AY++ +   +G+K L   L ML F   AVPG V G+ Y+  FN    P+++  GT  ++++  +   L          L QLD   + A+LSLK    +    +  P+  PALL  +   FV AMTTVSA +FL + DT +A   +LN  + G  G A A
Sbjct:  474 GAWPSLINTMIYAGIAAPLTALFGLLIAYIVVRKDFQGKKTLEF-LTMLCF---AVPGTVAGVSYILAFN--DAPMYIT-GTGIIIIISMVMRDLPIGMRAAIAGLGQLDKSLDEASLSLKGSSLKTIWFIVFPLLKPALLSALVTSFVRAMTTVSAIVFLVTADTRVATAYILNRVEDGEYGVAIA 653          
BLAST of EY674935 vs. ExPASy Swiss-Prot
Match: FBPB1_HAEIN (Putative ferric transport system permease protein fbpB 1 OS=Haemophilus influenzae GN=fbpB1 PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.730e-12
Identity = 56/166 (33.73%), Postives = 84/166 (50.60%), Query Frame = -2
Query:  111 GGWLAYRNSITMALCTALIGSVLIFTGAYLMEKT--KGQKGLNLALRMLSFVPMAVPGLVLGLGYVFFFNLNGNPLHVLYGTMTLLVVCTIAHYLXXXXXXXXXALRQLDAEFEAAALSLKAPLYRHYLRVTVPICLPALLDIVRYLFVSAMTTVSAAIFLYSPDT 602
            G W +  N++  A   A + +      AY++ +   +G+K L   L ML F   AVPG V G+ Y+  FN    PL++  GT  ++++  +   L          L QLD   + A+LSLK   ++    + +P+  PALL  +   FV AMTTVSA IFL + DT
Sbjct:  426 GAWPSLINTLIYAGIAAPLTAFFGLLIAYIVVRKDFQGKKSLEF-LTMLCF---AVPGTVAGVSYILAFN--NAPLYIT-GTGIIVIISMVMRDLPIGMRAAIAGLGQLDKSLDEASLSLKGSSWKTLCFIVLPLLKPALLSALVTSFVRAMTTVSAIIFLVTADT 584          
The following BLAST results are available for this feature:
BLAST of EY674935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
FBPB_ACTPL4.118e-1432.62Ferric transport system permease protein fbpB OS=A... [more]
FBPB1_HAEIN1.730e-1233.73Putative ferric transport system permease protein ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-D08-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674935 ID=EY674935; Name=EY674935; organism=Citrus sinensis; type=EST; length=1062bp
TTTCTTGTATTACGGCGCCGCGGTACGGTCGGGATTCCGGGTCGACTCGC
CGCCGCGCCGCCGACGTTGCCCGCGTCGTCCATGTTCAGCACGGCGACTG
CCGCGAGGATGGTGTCGGGGCTGTAGAGGAAGATCGCGGCGGAGACGGTG
GTCATCGCCGAGACGAACAGGTAGCGCACGATGTCCAGCAACGCCGGCAG
GCAGATCGGCACGGTGACCCGCAGGTAATGCCGGTACAGCGGCGCCTTGA
GGGACAATGCGGCGGCTTCGAACTCGGCGTCCAACTGACGCAGGGCCGTG
GTGGCGGTCATTTGTGCGGTGGTCAAATAGTGAGCAATGGTGCACACCAC
CAGCAGCGTCATGGTGCCGTAGAGCACATGCAGCGGGTTGCCGTTGAGGT
TGAAAAAGAACACGTAGCCCAGGCCCAGCACCAACCCTGGCACCGCCATC
GGCACGAAGCTGAGCATGCGCAGCGCTAGGTTCAGGCCCTTCTGGCCCTT
GGTCTTTTCCATCAGGTAGGCGCCGGTAAAGATCAGCACGCTGCCGATCA
ACGCGGTGCACAGGGCCATGGTGATGCTGTTGCGGTAGGCCAGCCAACCC
CCGCCGGCCGTGTCCTCGAACTGGTAGTGGGGCCAGGGACAGCGACAGGT
TTGTAGGGCCGAACTTCACCAGCGACCAGTAGAACCCGCCTTGCCGAAAC
CCCACAACAGGATCGCCCAAATCACCAGGGACAATGGGCCCAATTACCAC
CCTCCCCGCAGTTTTCAAGGGCCCCGGCTGGAAAACCTTGGGGGCGCGGG
CCCCTCCAAAAGGAACCAAGCCTTACATTAACCGGGCCTGGCAACGTTCA
TACCCTTTTTCTTAAGGGGCCCCCCAAAATTTCAATTTCCTGGGGCCCGC
CTTTTTTAAAAACCGCCGTGGGCGGGGGAAAAAACCCGGGGGGGTTTTCC
CCACAAATTTTATCCCCCCCTTTTGGGACCCACCCATCCCCCCCCCTTTT
TTCCCCCCCCCGGGGGGGGGGTGAAAAAAAAAGACAGAAAGAGAGGGCCC
CCCGCCCCCCCC
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