EY674916

Overview
NameEY674916
Unique NameEY674916
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1027
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY674916 vs. ExPASy Swiss-Prot
Match: GLUP_BACSU (Rhomboid protease gluP OS=Bacillus subtilis GN=gluP PE=1 SV=2)

HSP 1 Score: 39.6614 bits (91), Expect = 4.610e-11
Identity = 14/39 (35.90%), Postives = 28/39 (71.79%), Query Frame = 2 
Query:  380 GISGNLTSFLHTPEPTVGGTGPVFAIIGALAYLSVPEQR 496
            GI+G++ SF+ +P P+ G +G +F  +GAL Y+++  ++
Sbjct:  269 GITGSIASFVFSPYPSAGASGAIFGCLGALLYVALSNRK 307

HSP 2 Score: 38.891 bits (89), Expect = 4.610e-11
Identity = 21/45 (46.67%), Postives = 26/45 (57.78%), Query Frame = 3 
Query:  114 FLFEIASPIRNSEFGFFSLPLLYGAKINELILVGEWWRLVTPMFL 248
            FL EI     N+E       + +GAK N LI  GEWWRL+TP+ L
Sbjct:  192 FLLEINGGSTNTE-----TLVAFGAKENSLIAQGEWWRLLTPIVL 231

HSP 3 Score: 28.8758 bits (63), Expect = 4.610e-11
Identity = 14/34 (41.18%), Postives = 19/34 (55.88%), Query Frame = 1 
Query:  268 HSGLFHVALSCWALLTFGPQVCKSYGPFTFFLIY 369
            H G+ H+A +  AL + G  V + YG   F LIY
Sbjct:  232 HIGIAHLAFNTLALWSVGTAVERMYGSGRFLLIY 265
The following BLAST results are available for this feature:
BLAST of EY674916 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
GLUP_BACSU4.610e-1135.90Rhomboid protease gluP OS=Bacillus subtilis GN=glu... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-003-A11-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674916 ID=EY674916; Name=EY674916; organism=Citrus sinensis; type=EST; length=1027bp
CACGCGTCCGGGATGGTGTGAGGAGCCTAGAGAGGGATCTGGCTTTACAG
CGGACTGAAGAAACCTCCAATCTCTACTTAATAAGTATATTGGTTTCTAT
AGATGTTGCAGTTTTTTTGTTTGAGATTGCCAGCCCAATAAGGAACTCTG
AATTTGGGTTTTTTTCACTCCCATTGTTGTACGGTGCAAAGATAAACGAG
TTGATCCTCGTTGGCGAGTGGTGGAGGCTAGTGACACCAATGTTTCTGGT
ACAAGATTGACAATGGGCACTCGGGGCTTTTTCACGTAGCTCTTAGTTGC
TGGGCACTTCTTACTTTTGGGCCTCAAGTATGTAAGAGCTATGGACCATT
TACATTCTTCTTGATATACACACTTGNGAGGAATTTCTGGCAACTTGACA
AGCTTCCTTCATACACCAGAGCCAACTGTTGGTGGGACGGGACCTGTTTT
TGCCATAATTGGAGCTTTGGCTTATTTATCAGTTCCAGAACAAAGATTTT
GATTGCCAAGGATGTATCAAAGAGAATGTTCCAGAAGGCGATACTTTCTA
CGGCCCTGACCTTCCAAATAAGCCAATTTTGGGCCAGTTGATACGTGGGC
CCACCTCGAACCAGCTTTTAAGGGGAAAAATATACGGGTTTTTTGAAGTG
TCCCTCCAATAACAACCCGGGTGAATGGCTTCCTTCCAAAAAAAAAGTCT
GGGAAAAAAAGAGAAAAAAACCTGGATTTAAAACAAAATTGCCCAACTCC
TTGGAAAAACCCCCCCATTTGGGGTTCCCCCATCCTTTGGTTATCATTTT
TTAGGGCCCCTTTTTTTTTTTGTTTTTTTTAAAACCCCCCCCCCCCCACC
CCCCTAGGCCTTTTGAAATAGAAAACTCAAAAAACCTTTTTTATATATTT
ATAAAAAATAACCCCGGGGGGGGTGTACGACAAAAGGGGGGAAGGTTCCT
GTGTTTTTTATATAACATCTTTTTTTTATGAAAAAAAAAATAGGAGAAAA
GAGAGGGCGACCCCACAAATAAAAACA
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