EY674904

Overview
NameEY674904
Unique NameEY674904
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1022
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY674904 vs. ExPASy Swiss-Prot
Match: BH121_ARATH (Transcription factor bHLH121 OS=Arabidopsis thaliana GN=BHLH121 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 9.538e-29
Identity = 73/157 (46.50%), Postives = 92/157 (58.60%), Query Frame = 3 
Query:   12 NDLREEKLSLRSEIENLNIQYQQRVRAMVPW-AAMDHSVXXXXXXXXXXXXXXXXXXXXXXXXXXXX-YPMFGNQNPGVIPNPCSTFVPYMAPNTLVEXXXXXXXXXXXXXXGRSQGSAKQDSGNKSSGESKIEKNEDSNDVTTDLELKTPGSTTDQ 476
            NDLREEK SL+S+IENLN+QYQQR+R+M PW AAMDH+V                             Y  FGNQNP +IP PC T++PYM PNT+VE               ++ G+  ++   K S ES+ EK EDSN+V T LELKTPGST+D+
Sbjct:  134 NDLREEKTSLKSDIENLNLQYQQRLRSMSPWGAAMDHTVMMAPPPSFPYPMPIAMPPGSIPMHPSMPSYTYFGNQNPSMIPAPCPTYMPYMPPNTVVEQQSVHIP--------QNPGNRSREPRAKVSRESRSEKAEDSNEVATQLELKTPGSTSDK 282
The following BLAST results are available for this feature:
BLAST of EY674904 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
BH121_ARATH9.538e-2946.50Transcription factor bHLH121 OS=Arabidopsis thalia... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-H09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674904 ID=EY674904; Name=EY674904; organism=Citrus sinensis; type=EST; length=1022bp
CCACGCGTCCGAATGACCTCAGGGAGGAGAAGTTATCTCTTAGATCTGAG
ATTGAGAACCTAAATATTCAGTATCAGCAGAGAGTCAGGGCAATGGTTCC
TTGGGCTGCTATGGATCACTCAGTTATGATGGCACCACCTTCTTATCCAT
ATCCGGTGCCAATGCCGATGCCTCCTGGGGCGATACCCATGCATCCGCCC
ATGCAGCCATACCCCATGTTTGGAAATCAGAATCCTGGGGTCATTCCTAA
CCCCTGTTCAACTTTTGTCCCGTATATGGCTCCTAATACACTGGTGGAAC
AACAGTCCGCGCAATATGCATCTGCAGTTGCACAGCCAAGTGGTAGGTCC
CAAGGTTCAGCTAAACAAGATTCTGGAAACAAGTCATCAGGGGAGAGCAA
GATTGAGAAGAATGAGGACTCTAACGATGTCACAACTGACCTAGAATTGA
AAACTCCTGGATCGACAACAGATCAGGTCAGTTGGATCTTTCTAGCTTGA
TTTGATGAATGACATAAAGCCTCTGCACTGCTATGTCAATAATTATCTGA
TTGAGCCCTTTTTACTGAATTGAAATTGTTCCATAGGGATCTTCCTTCAG
GAACAAGAAAATCCCAAAAATTCCTTGAGGAAGGAAAATAATTTTCACCA
AGGGGAATTTCCCCAAGTAAGGGGTTCCCCCTTTCCCGTAATGGAAAAAA
AAATTTCACCAAAAAAACGAAACCTGGGGGGCAAAAAGGGGTGAACAAAT
TTAGGAAAAAAAATTTAAAAAAAAAAAGGCCCCCGGGGTTTTTTTTAAGC
TTTCCCCCCCATTTTACCCCACCCAATTTTTTTCCCCAATTCCAAATTTG
AATTTTTCCAAAAACCTTCCAAATTTTGTTTTTTCAAAATTTTTATTTTT
TTGTTTTTTTAAAAAAATTTAATTTTTTAATTTTTTTTTGGGAGAAAGAA
GAGGGGGGGAGAACAAAAAAAAAAAGGTGTCCTCCTTTCTTTGTTTTGTT
CCCACCCCACACAAAACAAAAA
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