EY674903

Overview
NameEY674903
Unique NameEY674903
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length967
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY674903 vs. ExPASy Swiss-Prot
Match: Y4115_ARATH (Uncharacterized protein At4g01150, chloroplastic OS=Arabidopsis thaliana GN=At4g01150 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.900e-39
Identity = 94/167 (56.29%), Postives = 115/167 (68.86%), Query Frame = 1 
Query:   52 MAATAYAAVLTPRVPSTTTVKVKSSHCFALPCLXXXXXXXXXXXX-IKQVSES--RRFPLLQVRASSSEETSTVDADELFSDLKEKWDAIENKSTVLLYGGGAIVAVWLSSTIVGAINSVXXXXXXXXXXXXXYTGWFVYRYLLFKSSRKELATDIEALKKKIAGTE 543
            +AA++  AV+ PRVP+ +T       C A+P L             +K VS +  ++  LL+ RASS EETS++D +EL +DLKEKWD +ENKSTVL+YGGGAIVAVWLSS +VGAINSV             YTGWFVYRYLLFKSSRKELA DIE+LKKKIAG+E
Sbjct:    5 VAASSSMAVMVPRVPAVST------RCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELLKTRASS-EETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE 164
The following BLAST results are available for this feature:
BLAST of EY674903 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4115_ARATH1.900e-3956.29Uncharacterized protein At4g01150, chloroplastic O... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-H07-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674903 ID=EY674903; Name=EY674903; organism=Citrus sinensis; type=EST; length=967bp
CCACGCGTCCGCGAAAAGAAAAAGAAAGAACACCACAAATCAAAAGTATC
AATGGCAGCGACGGCGTACGCGGCGGTGTTAACTCCACGTGTCCCCTCAA
CCACCACCGTCAAAGTCAAATCTTCTCACTGCTTTGCTCTTCCCTGCCTC
CCTCCTCGTTCGTCAACGCCACCATTCTCTTCTTCCATTAAACAAGTTTC
AGAGTCGAGAAGGTTTCCTTTGCTTCAGGTTAGAGCCTCTTCCTCAGAAG
AGACATCCACAGTTGATGCAGATGAACTTTTTTCAGACTTGAAGGAAAAG
TGGGATGCCATTGAAAACAAGTCCACGGTACTTCTCTATGGAGGTGGGGC
AATAGTGGCTGTTTGGTTATCCTCAACTATTGTTGGTGCCATCAATTCAG
TGCCTTTGCTTCCCAAACTCTTGGAGTTGATTGGACTTGGTTATACTGGA
TGGTTTGTCTACAGATACCTTCTCTTCAAGTCAAGCAGAAAAGAACTAGC
CACGGATATTGAAGCACTGAAGAAGAAGATTGCTGGAACTGAATAAATTG
TACATTCTGGAGGCAATTCATGTTTGTCCCTGATAGTCATTTATTTTGGT
CCTCTATCATTGCATATGAAGCACTTGTATCCTGTAAAGTAAGCTGCGTA
CGGATCCGTTTTATCCCTGTATTTTCCAGAATATCCCGGGAAAAAAAAAT
TTGAAAAATTTAGTGGTNGAAAAAAAAAAAAAAAGAAAAAAAAAAAACAA
AAATAGGATAAAACTAGAACCGAAAAAAAAAAAAAAAAAAAAAGAAAATG
AGCTCGGGAATATAAAAAAGATGGGGGGGGGGCGCGCCCTAAAAAAAAAA
AAAAAAAAAAAAACACCGGGGGGGGGGAAACACAAAAAAAACCTTTTTTA
TAAAGGGGCCCCCAAAAAAAATTAATATATACGGGGGGGGGCGCGTGTTT
TTTAAAAAACGCCGGGG
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