EY674900

Overview
NameEY674900
Unique NameEY674900
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length999
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY674900_ssr218 microsatellite EY674900_ssr218:218..229. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY674900 vs. ExPASy Swiss-Prot
Match: XTH6_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2)

HSP 1 Score: 302.753 bits (774), Expect = 2.104e-81
Identity = 147/219 (67.12%), Postives = 173/219 (79.00%), Query Frame = 2
Query:  155 RPATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKTR--GRAPFPMNQPRGVDSTLWGTKEWATKGGQKKINWEQNLLFLPY*QKILKFKG----GPPF-PGNNKMW 790
            RPATF+EDFK  WS++H+RQ+E G+AIQLVLDQ++GCGFASKR+YLFGRVSMKIKL+PGDSAGTVTAFYMNS+T  VRDELDFEFLGNR+GQPY+VQTNI+A+GKGDREQRVNLWFDP+ DYH YTILW+H HIVFYVDDVPIR YK        +P +QP GV STLW   +WAT+GG +KI+W +   +  Y  K    +G    GP F P N   W
Sbjct:   31 RPATFVEDFKAAWSESHIRQMEDGKAIQLVLDQSTGCGFASKRKYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTATVRDELDFEFLGNRSGQPYSVQTNIFAHGKGDREQRVNLWFDPSMDYHTYTILWSHKHIVFYVDDVPIREYKNNEAKNIAYPTSQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYY--KDFDIEGCPVPGPTFCPSNPHNW 247          
BLAST of EY674900 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 297.36 bits (760), Expect = 8.841e-80
Identity = 143/219 (65.30%), Postives = 170/219 (77.63%), Query Frame = 2
Query:  155 RPATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKTR--GRAPFPMNQPRGVDSTLWGTKEWATKGGQKKINWEQNLLFLPY*QKILKFKGGP-----PFPGNNKMW 790
            RPA F +DF++ WSD H+ QI+GGRAIQL LD +SGCGFASK+QYLFGRVSMKIKL+PGDSAGTVTAFYMNS+T++VRDELDFEFLGNR+GQPYTVQTN++A+GKGDREQRVNLWFDP+ D+H Y I WNH  IVFYVD+VPIRVYK     + P+P  QP GV STLW   +WAT+GG +KINW +   +  Y  K    +G P       P N+K W
Sbjct:   30 RPAKFEDDFRIAWSDTHITQIDGGRAIQLKLDPSSGCGFASKKQYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTDSVRDELDFEFLGNRSGQPYTVQTNVFAHGKGDREQRVNLWFDPSRDFHEYAISWNHLRIVFYVDNVPIRVYKNNEARKVPYPRFQPMGVYSTLWEADDWATRGGIEKINWSRAPFYAYY--KDFDIEGCPVPGPADCPANSKNW 246          
BLAST of EY674900 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.767e-57
Identity = 102/183 (55.74%), Postives = 132/183 (72.13%), Query Frame = 2
Query:  167 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKTRG--RAPFPMNQPRGVDSTLWGTKEWATKGGQKKINWEQ 709
            F  ++  TW+  H++ + GG  + LVLD+ +G GF SK  YLFG  SM IK+V GDSAGTVTAFY++S      DE+DFEFLGNRTGQPY +QTN++  G G+REQR+NLWFDP+ DYH Y++LWN + IVF+VDDVPIRV+K        FP NQP  + S+LW   +WAT+GG +K NWE+
Sbjct:   32 FGRNYFPTWAFDHIKYLNGGSEVHLVLDKYTGTGFQSKGSYLFGHFSMHIKMVAGDSAGTVTAFYLSSQNSE-HDEIDFEFLGNRTGQPYILQTNVFTGGAGNREQRINLWFDPSKDYHSYSVLWNMYQIVFFVDDVPIRVFKNSKDVGVKFPFNQPMKIYSSLWNADDWATRGGLEKTNWEK 213          
BLAST of EY674900 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 1.052e-56
Identity = 103/183 (56.28%), Postives = 130/183 (71.04%), Query Frame = 2
Query:  167 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKTRG--RAPFPMNQPRGVDSTLWGTKEWATKGGQKKINWEQ 709
            F  ++  TW+  H++ + GG  IQL LD+ +G GF SK  YLFG  SM IKLVPGDSAGTVTAFY++S T    DE+DFEFLGNRTGQPY +QTN++  GKGDREQR+ LWFDP   YH Y++LWN + IVFYVDD PIRV+K        FP NQP  + ++LW   +WAT+GG +K +W +
Sbjct:   31 FGRNYVPTWAFDHIKYLNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMYIKLVPGDSAGTVTAFYLSS-TNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTTQYHRYSVLWNMYQIVFYVDDYPIRVFKNSNDLGVKFPFNQPMKIYNSLWNADDWATRGGLEKTDWSK 212          
BLAST of EY674900 vs. ExPASy Swiss-Prot
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.794e-56
Identity = 99/181 (54.70%), Postives = 130/181 (71.82%), Query Frame = 2
Query:  167 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKTRG--RAPFPMNQPRGVDSTLWGTKEWATKGGQKKINW 703
            F ++++ +W+  H++ + GG  + LVLD++SG GF SK+ YLFG  SMK+KLV GDSAG VTAFY++SN     DE+DFEFLGNRTGQPY +QTN++  GKGDREQR+ LWFDP   YH Y++LWN   IV +VDDVPIR +K        FP NQP  + S+LW   +WAT+GG +K +W
Sbjct:   32 FWKNYEPSWASHHIKYLSGGSTVDLVLDRSSGAGFQSKKSYLFGHFSMKLKLVGGDSAGVVTAFYLSSNNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKGYHSYSVLWNTFQIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTDW 211          
BLAST of EY674900 vs. ExPASy Swiss-Prot
Match: XTH1_SOLLC (Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 3.383e-55
Identity = 97/181 (53.59%), Postives = 130/181 (71.82%), Query Frame = 2
Query:  167 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKTRG--RAPFPMNQPRGVDSTLWGTKEWATKGGQKKINW 703
            F ++++ +W+  H++ + GG    L+LD++SG GF SK+ YLFG  SMK++LV GDSAG VTAFY++SN     DE+DFEFLGNRTGQPY +QTN++  GKG+REQR+ LWFDP   YH Y++LWN + IV +VDDVPIR +K        FP NQP  + S+LW   +WAT+GG +K NW
Sbjct:   33 FWKNYEPSWASHHIKFLNGGTTTDLILDRSSGAGFQSKKSYLFGHFSMKMRLVGGDSAGVVTAFYLSSNNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGNREQRIYLWFDPTKGYHSYSVLWNTYLIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTNW 212          
BLAST of EY674900 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 5.770e-55
Identity = 97/183 (53.01%), Postives = 131/183 (71.58%), Query Frame = 2
Query:  167 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKTRG--RAPFPMNQPRGVDSTLWGTKEWATKGGQKKINWEQ 709
            F +++  TW+  H+  + GGR +QL LD+ +G GF ++  YLFG  SM IKLV GDSAGTVTAFY++S      DE+DFEFLGNRTGQPY +QTN+++ GKGDREQR+ LWFDP  DYH Y++LWN + I F+VDD PIRV+K        +P +QP  + S+LW   +WAT+GG++K +W +
Sbjct:   32 FDKNYVPTWAQDHIHYVNGGREVQLSLDKTTGTGFQTRGSYLFGHFSMHIKLVGGDSAGTVTAFYLSSQNSE-HDEIDFEFLGNRTGQPYILQTNVFSGGKGDREQRIYLWFDPTKDYHSYSVLWNLYMIAFFVDDTPIRVFKNSKDLGVRYPFDQPMKLYSSLWNADDWATRGGREKTDWSK 213          
BLAST of EY674900 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 7.536e-55
Identity = 100/183 (54.64%), Postives = 130/183 (71.04%), Query Frame = 2
Query:  167 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKTRG--RAPFPMNQPRGVDSTLWGTKEWATKGGQKKINWEQ 709
            F  ++  TW+  H++   GG  IQL LD+ +G GF SK  YLFG  SM IK+VPGDSAGTVTAFY++S      DE+DFEFLGNRTGQPY +QTN++  GKGDREQR+ LWFDP  +YH Y+ILWN + IVF+VD+VPIRV+K        FP +QP  + ++LW   +WAT+GG +K +W +
Sbjct:   33 FGRNYVPTWAFDHIKYFNGGSDIQLHLDKYTGTGFQSKGSYLFGHFSMYIKMVPGDSAGTVTAFYLSSQNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEYHRYSILWNLYQIVFFVDEVPIRVFKNSKDLGVKFPFDQPMKIYNSLWNADDWATRGGLEKTDWSK 214          
BLAST of EY674900 vs. ExPASy Swiss-Prot
Match: XTH8_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 4.885e-54
Identity = 98/188 (52.13%), Postives = 129/188 (68.62%), Query Frame = 2
Query:  164 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTEN--VRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKTRGRAP----FPMNQPRGVDSTLWGTKEWATKGGQKKINWEQ 709
            +F ++F + WS+ H    + G    L LD ++GCGF +K  Y FG  SMK+KLV GDSAG VTA+YM S       RDE+DFEFLGNRTGQPY +QTN+Y NG G+RE R +LWFDP  DYH Y+ILWN+H +VF+VD VPIRVYK   + P    FP  +P  + S++W   +WAT+GG +K +W++
Sbjct:   24 SFEDNFNIMWSENHFTTSDDGEIWNLSLDNDTGCGFQTKHMYRFGWFSMKLKLVGGDSAGVVTAYYMCSENGAGPERDEIDFEFLGNRTGQPYIIQTNVYKNGTGNREMRHSLWFDPTKDYHTYSILWNNHQLVFFVDRVPIRVYKNSDKVPNNDFFPNQKPMYLFSSIWNADDWATRGGLEKTDWKK 211          
BLAST of EY674900 vs. ExPASy Swiss-Prot
Match: XTH_BRAOB (Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 8.332e-54
Identity = 98/181 (54.14%), Postives = 129/181 (71.27%), Query Frame = 2
Query:  167 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKTRG--RAPFPMNQPRGVDSTLWGTKEWATKGGQKKINW 703
            F  ++  TW+  H +Q+ GG  +QL+LD+ +G GF SK  YLFG  SM IKL  GD+AG VTAFY++S T N  DE+DFEFLGNRTGQP  +QTN++  GKG+REQR+ LWFDP+  YH Y++LWN + IVF+VD++PIRV+K        FP NQP  + S+LW   +WAT+GG +K NW
Sbjct:   34 FGRNYVPTWAFDHQKQLNGGSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSS-TNNEHDEIDFEFLGNRTGQPVILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSVLWNLYQIVFFVDNIPIRVFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNW 213          
The following BLAST results are available for this feature:
BLAST of EY674900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
XTH6_ARATH2.104e-8167.12Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH7_ARATH8.841e-8065.30Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH5_ARATH2.767e-5755.74Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHA_PHAAN1.052e-5656.28Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH_TOBAC1.794e-5654.70Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH1_SOLLC3.383e-5553.59Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_WHEAT5.770e-5553.01Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_SOYBN7.536e-5554.64Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH8_ARATH4.885e-5452.13Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_BRAOB8.332e-5454.14Xyloglucan endotransglucosylase/hydrolase OS=Brass... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-H04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674900 ID=EY674900; Name=EY674900; organism=Citrus sinensis; type=EST; length=999bp
CATAACCACAACATATAATTAAAGATCTCTTTCTAATTAGTAACAGATAA
TATTTTATTGTACGGCTTGTTTTACAGCTATGGCTATCCTAAGAAATGCA
ATAGCATTATTTGTGTTGCTTTACTGTCTTGTATCCTGCTCTTGCGTTTT
AGGGCGACCGGCTACTTTTCTTGAGGATTTTAAAGTCACATGGTCCGATG
CCCATCTCAGGCAAATCGAGGGAGGGAGGGCCATCCAGCTAGTTCTAGAC
CAAAATTCAGGATGTGGGTTTGCCTCCAAAAGGCAGTACTTGTTCGGGCG
TGTAAGCATGAAGATCAAGCTCGTTCCTGGAGACTCTGCTGGAACTGTCA
CTGCATTTTATATGAATTCCAACACCGAAAATGTGAGAGACGAGCTTGAT
TTTGAGTTCCTGGGAAACCGAACGGGTCAGCCTTACACGGTCCAGACCAA
TATCTATGCAAATGGAAAAGGCGATAGAGAACAGAGAGTGAACCTCTGGT
TTGACCCTGCTGCAGATTATCACCTTTACACTATTCTCTGGAACCATCAC
CATATTGTCTTCTATGTGGATGATGTGCCCATCAGGGTTTACAAAACCCG
TGGAAGGGCTCCATTTCCCATGAACCAACCCAGGGGGGTGGATTCAACCC
TGTGGGGAACCAAAGAATGGGCAACAAAAGGGGGGCAAAAAAAAATAAAT
TGGGAACAAAACCTCCTTTTTTTGCCTTATTAACAAAAAATTTTGAAATT
TAAGGGGGGCCCCCCTTTTCCCGGGAACAACAAAATGTGGGCCCTCAAAA
CCCCGGGTAAACGGGGTGGGGGGGGGAAAAAAAATTTTTTTCCCCCCCCC
CCCCCCCCCCCGGGGAAAAAAAAAAAAAAAAAAAAAAAAAGGGGGGTTTC
CCCCCCCCCCCCCCCATTTAATATTTTTTTAAATATATTTTGGGCCACAG
AAAAAAAAAAAATAAAAAAAAAAAAACCACCCCCCACACCACCCACCCC
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