EY674897

Overview
NameEY674897
Unique NameEY674897
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length960
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8511 contig Csv1_Contig8511:1..960. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY674897 vs. ExPASy Swiss-Prot
Match: PH1_ARATH (Pleckstrin homology domain-containing protein 1 OS=Arabidopsis thaliana GN=PH1 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 9.996e-17
Identity = 40/52 (76.92%), Postives = 49/52 (94.23%), Query Frame = 3 
Query:   24 YAFELSTRTETMYFIADSEKEKEDWINSIGRSIVQHSRSVTDSEIVDYDSKR 179
            +AFELS+ + TM+FIAD+EKEKE+WINSIGRSIVQHSRSVTDSE++DYD +R
Sbjct:   94 FAFELSSGSYTMFFIADNEKEKEEWINSIGRSIVQHSRSVTDSEVLDYDHRR 145
The following BLAST results are available for this feature:
BLAST of EY674897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PH1_ARATH9.996e-1776.92Pleckstrin homology domain-containing protein 1 OS... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-G12-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674897 ID=EY674897; Name=EY674897; organism=Citrus sinensis; type=EST; length=960bp
CGAAGATGTGTTGAATACCCTTGTACGCTTTTGAGCTGAGTACGAGGACT
GAGACGATGTACTTCATCGCTGATTCCGAGAAGGAGAAAGAGGACTGGAT
CAACTCCATCGGACGCTCCATAGTGCAGCACTCCAGGTCGGTTACTGATT
CCGAGATCGTTGATTACGATAGCAAGCGGTGATGACGATTGATGATAAAC
TACAGGTTTGAATCATTTGTGCCACGTGGCAACGTGTGGTGAATAATTCC
TTGTTTGCTTTGTATATTGTGATGCTTAAATTAGTGTGTATTAGTTTGTT
AGGGCTTCCGCGGTGTATGTTCTGATGCTTACTTTGCCACATGAAAATGC
TTATAAATTGAAATCAATTTTTGGTTTTTGTTATGGAATTCGTGAGAAAC
TGATGTTGATTGATGTAATTGTTGGTAACGTAATCGTCTCGTGAATTTGT
ATTGATTGCTTCTTGTTTGAACGTGGACTTGATTTCTGCTGAAATTGTCT
TGAATTAGTGAGCTGGGTGAATTGAATTAAAAGATTGGAATTTTTGTCTT
TCCTCTTGGAAATTTCGAGCACGGGTAAATAAGCCTGCGGACGGCAAAAG
TAATCCTTGGTTTTTTTTGATTTGGAAAAAACAATGGATTGGGTTTGGAA
AAAGGGGAAGAAGGGTTTAATAAAAACCTGGAAAAAAGGGCCCCCAATTT
TCCAACTCCCCCCATTTCTGGGGGGGGTTTATTTAGGGGGGCTAATTTTG
GGTTAATTGGAAACCCCCCAAAAAAAAATAAAAGCCCCTTTGGTTGGGGG
GAAAAGTGGCGTACAAAAGAGGTGAGGCCCTTTTATTCCACGTTTCTTTT
TCTCCCGGGGTCTCTTTTCCCCTTTTTCCCTTTCTTTTTGGAAAAAGAGG
GAAAAAGGTCCAACTTTTTCCAACTCCTCCCCTTTGTGTATAAACCCCCG
CTTGGTGGAG
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