EY674896

Overview
NameEY674896
Unique NameEY674896
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1009
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674896 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.657e-15
Identity = 57/198 (28.79%), Postives = 97/198 (48.99%), Query Frame = 3
Query:   54 ATTLPFLILALASNSLLVLGTSSVPEPLLDVHGNKVESTIKYYIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLSPYNNST-IVRESTDLNLRFSVLLSGRD-YCNEQPLWKVDNYDPASGKWFITTRGT*WVNPEAENFAKLV*AWRKLEIFPGIYKILSLSIRFAKSWCQ---TLPQPLGRSFEE 632
            AT +  L+ A  S S      ++   P+LD  G+++++ ++YY++S+I                 CP  V+Q  SD+ NG  +  S  ++   +VR STD+N+ F  +   RD  C+   +W++DNYD ++GKW++TT G      + E     + +W K+E       +L    RF  S C    TL   +GR  ++
Sbjct:    4 ATAVVLLLFAFTSKSYFFGVANAANSPVLDTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPI---RDRLCSTSTVWRLDNYDNSAGKWWVTTDGV-----KGEPGPNTLCSWFKIE----KAGVLGYKFRFCPSVCDSCTTLCSDIGRHSDD 189          
BLAST of EY674896 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 3.591e-12
Identity = 55/182 (30.22%), Postives = 84/182 (46.15%), Query Frame = 3
Query:   30 KHKMKISLATTLPFLILALASNSLLVLGTSSVPEPLLDVHGNKVESTIKYYIVSAI--WXXXXXXXXXXXXXXXYCPLDVIQLPSDMQNGIELTLSPYN-NSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDPASGKWFITTRGT*WVNPEAENFAKLV*AWRKLEIF--PGIYKIL 560
            K    +SL+      +LA A+N LL     S P P+LD+ G K+ +   YYIV  +                   CP  V+Q   ++ +   L   P N    +VR STDLN+ FS  +  R       +W++D YD ++G++F+T  G    NP  E  +    +W K+E F   G YK++
Sbjct:    2 KELTMLSLSFFFVSALLAAAANPLLS-AADSAPNPVLDIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCR--WTSSTVWRLDKYDESTGQYFVTIGGV-KGNPGPETIS----SWFKIEEFCGSGFYKLV 175          
The following BLAST results are available for this feature:
BLAST of EY674896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ASP_THECC2.657e-1528.7921 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU3.591e-1230.22Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-G10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674896 ID=EY674896; Name=EY674896; organism=Citrus sinensis; type=EST; length=1009bp
CGGACGCGTGGGCGGACTCTTGGGTTTGAAAACACAAAATGAAGATTTCA
TTAGCAACAACACTCCCTTTCCTTATCCTTGCCTTGGCCTCAAACTCTTT
GTTGGTCTTGGGCACCTCATCAGTTCCTGAACCTCTCCTTGATGTCCACG
GCAACAAGGTCGAATCCACCATTAAGTACTACATAGTCTCAGCCATCTGG
GGAGCTGGCGGTGGTGGAGTTAGCCTACACGGTGGCAGAAACGGATATTG
TCCGCTGGACGTTATCCAGTTACCTTCTGATATGCAAAATGGAATCGAAT
TAACACTGTCACCGTATAACAATTCTACAATTGTCCGAGAATCCACTGAT
CTCAACTTGAGATTCTCAGTGTTGCTATCTGGACGTGACTATTGTAACGA
ACAACCGTTGTGGAAAGTTGATAATTATGACCCGGCATCAGGCAAATGGT
TTATAACAACCCGGGGGACTTGATGGGTCAACCCTGAAGCTGAAAACTTT
GCTAAATTGGTTTAAGCTTGGAGAAAATTGGAAATTTTTCCAGGGATATA
CAAAATCCTTTCATTGTCCATCCGGTTTGCAAAGTCTTGGTGTCAAACTC
TGCCACAACCTTTGGGCCGTTCCTTTGAAGAAGGGCGTTCGACCTCCGGG
TTCTGGGTTCCTGAATAATAAAACCGGCATTTTCCTGTTTTTGTTAAATT
CCCCGCTAAAAGAAAAAATCAACACTTTGTGTAATACATTGTACCCCCAA
CCTAGCCAAGGGGTATTATTTTATTTCACAAAAAAAAGGAAACCGGGGCA
TACCGCGCCCTTTTTAATCCTCAAAGAAAATAAAAAATTATAAAAAAAAA
ATACCCCCGTGGGTTTCCCTTTTCCGGGGGGAATAAAAAAAATTTCTCAC
GCAGGGTGGGGGTTTATACCCCCCAATAAGGAAAAACAAACCCAAAAAAA
AATAAGTTTGGGTTGTTTTTTTTGTTTTTTGTTTTTGAAAAAAAAAACAA
AAAAATAAA
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