EY674890

Overview
NameEY674890
Unique NameEY674890
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1040
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674890 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 8.312e-20
Identity = 65/175 (37.14%), Postives = 93/175 (53.14%), Query Frame = 3
Query:   48 ATQPLLGISSNS-EPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLGT--NGQ--CPLDVIQLSSPSERGDNLRLLPYDNYK--IVKVSTDVNLRFPVKVSVKPCN--EEPLWKVDSYDDP----LIVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPKPC 533
            A  PLL  + ++  PVLDI G K+++   Y ++PVL   GG  T   T  NG   CP  V+Q     +    L   P +N K  +V+VSTD+N+ F    +  PC      +W++D YD+      +  GG +G+PG ET+ +WFKIE+   F   G Y +V CP+VC SC   C
Sbjct:   21 AANPLLSAADSAPNPVLDIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFP-ENPKEDVVRVSTDLNINFS---AFMPCRWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEE---FCGSGFYKLVFCPTVCGSCKVKC 188          
BLAST of EY674890 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.418e-19
Identity = 58/159 (36.48%), Postives = 88/159 (55.35%), Query Frame = 3
Query:   81 SEPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG--TNGQCPLDVIQLSSPSERGDNLRLLPYDNYK-IVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYDDPL----IVTGGSEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPKPCN 536
            + PVLD  G+++++ ++Y ++  + GAGG    LG  T   CP  V+Q  S  + G  +     D+   +V+VSTDVN+ F V +  + C+   +W++D+YD+      + T G +G PG  TL +WFKIEKAG       Y    CPSVC SC   C+
Sbjct:   28 NSPVLDTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEF-VPIRDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLG----YKFRFCPSVCDSCTTLCS 181          
BLAST of EY674890 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.192e-12
Identity = 53/160 (33.12%), Postives = 82/160 (51.25%), Query Frame = 3
Query:   84 EPVLDIIGNKVKSTLEYKLIPVLDGAGGFSTHL---GTNGQCPLDVIQLSSPSERGDNLRLLPYDNYK--IVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYDDPL---IVTGGSEGHPGAETLLNWFKIEKAG-NFSYGGVYNIVHCPSVCLSCPKPCN 536
            +P++DI G  V   ++Y ++  + GAGG    +   G   +CPL V+Q   P + G+ +      N K  IV  S D+N++F + ++   CNE   WKVD +   +   +  GG +G+ G E+  + FKI+KAG  FS    Y    CPS   +   PCN
Sbjct:    4 KPIVDIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQ--DPFDNGEPIIFSAIKNVKDNIVFESVDLNVKFNITIN---CNETTAWKVDRFPGVIGWTVTLGGEKGYHGFESTHSMFKIKKAGLPFS----YKFHFCPSYPRTRLIPCN 154          
The following BLAST results are available for this feature:
BLAST of EY674890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
MIRA_RICDU8.312e-2037.14Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
ASP_THECC1.418e-1936.4821 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
LSPI_CARPA2.192e-1233.13Latex serine proteinase inhibitor OS=Carica papaya... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-G04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674890 ID=EY674890; Name=EY674890; organism=Citrus sinensis; type=EST; length=1040bp
TGAAGACTTCATTGATAACTTTACTCTCCTTCCTTATCCTTACCTTGGCC
ACGCAGCCTCTATTGGGCATCTCATCAAACTCTGAACCTGTCTTAGATAT
CATTGGCAACAAGGTCAAATCCACCCTCGAGTATAAACTTATCCCAGTCC
TAGATGGCGCCGGTGGATTCAGCACACACCTAGGCACAAATGGACAGTGT
CCCTTGGACGTTATCCAATTAAGTTCTCCTAGCGAAAGGGGAGATAATTT
AAGATTACTTCCGTACGACAATTACAAAATTGTCAAGGTATCCACTGATG
TCAACCTGAGATTCCCCGTAAAAGTTTCTGTTAAGCCCTGTAATGAAGAA
CCATTGTGGAAAGTTGATAGCTATGACGATCCATTAATTGTAACCGGCGG
AAGTGAGGGCCACCCAGGAGCTGAAACGTTGCTAAATTGGTTTAAGATTG
AGAAAGCTGGAAATTTTTCATATGGTGGTGTATACAATATTGTCCATTGT
CCGAGTGTCTGTCTATCCTGTCCTAAACCCTGCAACCAAAATTGGCGTTT
CAACTAAGGATGGGCGTTCGACCTCTGGCTTCTAATTGGGGATCATGAAA
CCCGGGCTTTTAAAATGTTCTGTTTTTTCCCATCAGAAGAAAGCTCCAAG
GGCTACTTCAAGCTGCTAACCCAATAATTCAGGGTTTTTTTGAAAGCCTG
CTGAAAAACAATTTCAGTGGGACCGCCGAAAATGGAAATGAAAATTTTAG
CTGGGATCCTTTCCAAATATAAAAAACCCGGGCCAAGATACCTTTTTTTC
TTTTTTTTTAAAAAAAAAAAAAAAAAAAAACACCCCCCCGGGGGGTACCT
TTTTGTCGTGTGTTGGTATACCCCTTTTCCCCAGTGGGTTTTGTGTTTTT
GAGGATAAACAAGAGCAAATAAAATAAATACAAAATGAAGAAACATTTGA
TATTTTGAGTAGTTGGGAACTATAAGGGGTGAGTTACCACGACTGCTGTT
ACTAATATTTAAGATCTATTGTTGATCAATTTATAATTAA
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