EY674885

Overview
NameEY674885
Unique NameEY674885
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length976
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674885 vs. ExPASy Swiss-Prot
Match: GOX2_ARATH (Probable peroxisomal (S)-2-hydroxy-acid oxidase 2 OS=Arabidopsis thaliana GN=At3g14420 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.767e-24
Identity = 49/86 (56.98%), Postives = 68/86 (79.07%), Query Frame = 1
Query:  118 EPVNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPE 375
            E  N+ E+  +A+  LPKM YD+YA GAED+ TL+EN  AF RI FR RIL+DVS+ID++TT+L +KIS PI++APTA+ K+A+P+
Sbjct:    2 EITNVTEYDAIAKQKLPKMVYDYYASGAEDQWTLQENRNAFARILFRPRILIDVSKIDMTTTVLGFKISMPIMVAPTAMQKMAHPD 87          

HSP 2 Score: 25.0238 bits (53), Expect = 6.767e-24
Identity = 16/44 (36.36%), Postives = 22/44 (50.00%), Query Frame = 2
Query:  377 GEVATARAAASCNTIMVFIPFTF*QLHR-GGCGPAPNGVRFLSI 505
            GE ATARAA++  TIM    +    +      GP   G+RF  +
Sbjct:   88 GEYATARAASAAGTIMTLSSWATSSVEEVASTGP---GIRFFQL 128          
BLAST of EY674885 vs. ExPASy Swiss-Prot
Match: GOX_SPIOL (Peroxisomal (S)-2-hydroxy-acid oxidase OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.937e-23
Identity = 52/86 (60.47%), Postives = 68/86 (79.07%), Query Frame = 1
Query:  118 EPVNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPE 375
            E  N+NE++ +A+  LPKM YD+YA GAED+ TL EN  AF RI FR RIL+DV+ ID++TTIL +KIS PI+IAPTA+ K+A+PE
Sbjct:    2 EITNVNEYEAIAKQKLPKMVYDYYASGAEDQWTLAENRNAFSRILFRPRILIDVTNIDMTTTILGFKISMPIMIAPTAMQKMAHPE 87          
BLAST of EY674885 vs. ExPASy Swiss-Prot
Match: GOX1_ARATH (Probable peroxisomal (S)-2-hydroxy-acid oxidase 1 OS=Arabidopsis thaliana GN=At3g14415 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.940e-23
Identity = 48/86 (55.81%), Postives = 67/86 (77.91%), Query Frame = 1
Query:  118 EPVNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPE 375
            E  N+ E+  +A+  LPKM YD+YA GAED+ TL+EN  AF RI FR RIL+DV++ID++TT+L +KIS PI++APTA  K+A+P+
Sbjct:    2 EITNVTEYDAIAKAKLPKMVYDYYASGAEDQWTLQENRNAFARILFRPRILIDVNKIDMATTVLGFKISMPIMVAPTAFQKMAHPD 87          

HSP 2 Score: 25.0238 bits (53), Expect = 1.940e-23
Identity = 16/44 (36.36%), Postives = 22/44 (50.00%), Query Frame = 2
Query:  377 GEVATARAAASCNTIMVFIPFTF*QLHR-GGCGPAPNGVRFLSI 505
            GE ATARAA++  TIM    +    +      GP   G+RF  +
Sbjct:   88 GEYATARAASAAGTIMTLSSWATSSVEEVASTGP---GIRFFQL 128          
BLAST of EY674885 vs. ExPASy Swiss-Prot
Match: CYB2_HANAN (Cytochrome b2, mitochondrial OS=Hansenula anomala GN=CYB2 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.643e-14
Identity = 39/87 (44.83%), Postives = 56/87 (64.37%), Query Frame = 1
Query:  115 AEPVNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPE 375
            ++ +NL++F+ +AR  LP     +Y   A+DE TL+EN  A+HRI F  +IL+DV  +D+ST     K SAP  I+ TAL KL +PE
Sbjct:  185 SQMINLHDFETIARQILPPPALAYYCSAADDEVTLRENHNAYHRIFFNPKILIDVKDVDISTEFFGEKTSAPFYISATALAKLGHPE 271          
BLAST of EY674885 vs. ExPASy Swiss-Prot
Match: HAOX2_BOVIN (Hydroxyacid oxidase 2 OS=Bos taurus GN=HAO2 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.244e-14
Identity = 43/84 (51.19%), Postives = 55/84 (65.48%), Query Frame = 1
Query:  124 VNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPE 375
            V L +F+E AR  L K  +DF  GGA+D  T  EN+ AF +I  R R L DVS++D+ TTI   +ISAPI IAPT  H+LA P+
Sbjct:    4 VCLTDFREHAREHLSKSTWDFIEGGADDCCTRDENMAAFKKIRLRPRYLKDVSKVDMRTTIQGAEISAPICIAPTGFHRLAWPD 87          
BLAST of EY674885 vs. ExPASy Swiss-Prot
Match: CYB2_YEAST (Cytochrome b2, mitochondrial OS=Saccharomyces cerevisiae GN=CYB2 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.391e-13
Identity = 37/83 (44.58%), Postives = 54/83 (65.06%), Query Frame = 1
Query:  124 VNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANP 372
            +NL +F+ LA   L K  + +Y+ GA DE T +EN  A+HRI F+ +ILVDV ++D+ST +L   +  P  ++ TAL KL NP
Sbjct:  203 INLYDFEYLASQTLTKQAWAYYSSGANDEVTHRENHNAYHRIFFKPKILVDVRKVDISTDMLGSHVDVPFYVSATALCKLGNP 285          
BLAST of EY674885 vs. ExPASy Swiss-Prot
Match: HAOX_DICDI (Hydroxyacid oxidase OS=Dictyostelium discoideum GN=haox PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.817e-13
Identity = 39/82 (47.56%), Postives = 54/82 (65.85%), Query Frame = 1
Query:  124 VNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLAN 369
            V+++E  E A+  LPKM YD+YA G+ D+ TL EN  AF RI    R LVDVS+++  T I    IS PI+IAP A+ ++A+
Sbjct:   32 VSVSELHEEAKRLLPKMAYDYYASGSNDQITLAENENAFSRIKLVPRSLVDVSKVNTKTRIFGRDISTPILIAPWAMQRMAS 113          
BLAST of EY674885 vs. ExPASy Swiss-Prot
Match: HAOX2_HUMAN (Hydroxyacid oxidase 2 OS=Homo sapiens GN=HAO2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.623e-12
Identity = 42/84 (50.00%), Postives = 49/84 (58.33%), Query Frame = 1
Query:  124 VNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPE 375
            V L +FQ  AR  L K   DF  GGA+D  T  +N+ AF RI  R R L DVS +D  TTI   +ISAPI IAPT  H L  P+
Sbjct:    4 VCLTDFQAHAREQLSKSTRDFIEGGADDSITRDDNIAAFKRIRLRPRYLRDVSEVDTRTTIQGEEISAPICIAPTGFHCLVWPD 87          
BLAST of EY674885 vs. ExPASy Swiss-Prot
Match: HAOX1_HUMAN (Hydroxyacid oxidase 1 OS=Homo sapiens GN=HAO1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.426e-12
Identity = 32/80 (40.00%), Postives = 53/80 (66.25%), Query Frame = 1
Query:  130 LNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLAN 369
            +N++++ A+  LPK  YD+Y  GA DE TL +N+ AF R     R+L +V+  DLST++L  ++S PI +  TA+ ++A+
Sbjct:    8 INDYEQHAKSVLPKSIYDYYRSGANDEETLADNIAAFSRWKLYPRMLRNVAETDLSTSVLGQRVSMPICVGATAMQRMAH 87          
BLAST of EY674885 vs. ExPASy Swiss-Prot
Match: HAOX2_RAT (Hydroxyacid oxidase 2 OS=Rattus norvegicus GN=Hao2 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 7.633e-12
Identity = 39/84 (46.43%), Postives = 52/84 (61.90%), Query Frame = 1
Query:  124 VNLNEFQELARLALPKMYYDFYAGGAEDEHTLKENVEAFHRITFRSRILVDVSRIDLSTTILDYKISAPIIIAPTALHKLANPE 375
            V L +F+  A+  L K  +DF  G A+D  T  EN+ AF RI  R R L D+S++D  TTI   +ISAPI I+PTA H +A P+
Sbjct:    4 VCLADFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQGQEISAPICISPTAFHSIAWPD 87          
The following BLAST results are available for this feature:
BLAST of EY674885 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
GOX2_ARATH6.767e-2456.98Probable peroxisomal (S)-2-hydroxy-acid oxidase 2 ... [more]
GOX_SPIOL1.937e-2360.47Peroxisomal (S)-2-hydroxy-acid oxidase OS=Spinacia... [more]
GOX1_ARATH1.940e-2355.81Probable peroxisomal (S)-2-hydroxy-acid oxidase 1 ... [more]
CYB2_HANAN1.643e-1444.83Cytochrome b2, mitochondrial OS=Hansenula anomala ... [more]
HAOX2_BOVIN6.244e-1451.19Hydroxyacid oxidase 2 OS=Bos taurus GN=HAO2 PE=2 S... [more]
CYB2_YEAST1.391e-1344.58Cytochrome b2, mitochondrial OS=Saccharomyces cere... [more]
HAOX_DICDI1.817e-1347.56Hydroxyacid oxidase OS=Dictyostelium discoideum GN... [more]
HAOX2_HUMAN2.623e-1250.00Hydroxyacid oxidase 2 OS=Homo sapiens GN=HAO2 PE=2... [more]
HAOX1_HUMAN3.426e-1240.00Hydroxyacid oxidase 1 OS=Homo sapiens GN=HAO1 PE=1... [more]
HAOX2_RAT7.633e-1246.43Hydroxyacid oxidase 2 OS=Rattus norvegicus GN=Hao2... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-F11-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674885 ID=EY674885; Name=EY674885; organism=Citrus sinensis; type=EST; length=976bp
CTAATCCTTTATATGCCTCTTGACTTTGACTCTGCCCCCGACTCACTGTT
GTAATCTGCCTCACGATCGACCTTCATCAGTTGAAATTTTTAGTCATTCG
GGTTCCAAATGGCAGCTGAACCTGTTAATTTGAATGAGTTCCAAGAATTG
GCAAGGCTGGCCCTTCCAAAAATGTATTATGATTTCTACGCTGGTGGAGC
AGAAGATGAACATACCCTAAAAGAGAATGTGGAAGCCTTTCATAGAATTA
CGTTTCGGTCAAGAATTCTTGTCGATGTCAGCAGAATTGATTTATCGACT
ACCATACTTGATTACAAAATCTCGGCTCCCATTATCATTGCTCCAACGGC
TTTGCATAAGCTTGCAAACCCTGAAAGGAGAGGTAGCCACAGCCAGAGCA
GCAGCTTCATGTAACACCATAATGGTTTTTATTCCTTTCACATTCTAGCA
GCTCCATAGAGGAGGTTGCGGCCCAGCTCCCAATGGCGTTCGCTTCCTAT
CAATTATATGTAAGTTGGCTTGTCTGGGGCTCCTTCATTTTTCCTTTTTC
CCTTTTTTAATTTTTTTAATTTTCCCCCCTCCCTATTCTAATTAGAAAAA
CGGCACATTTTTTTGAACCAACAACAATTTTCCCTTTTTTATAATAATGG
TAAATTAAAGGGGTTTGAAAACAAACTATGGGCTCCCTTTTTTTGTGAAA
AGGTTATTCACAAAAAAAGAAAAATAAAACAACCTACTCCTATGTGCAAA
AAAAATAAAGAGGGAAGGGGTTTTTAAAGGGGGCTATTTGGTCCACATCA
GGCTATATAAACACCAAGAAACTTGTGGTCGAAAAGGGGGGGGGCGAAAA
AATATACAAAATAAAGAGAGTGGAATGAATTCTATTTCCTATTTTTTTAT
ATTGCTTTGGGGTGTTTCTCTAGTAAAATACATTCCCCACACGAGAAATA
CCACAACAACGCCAATCAATATTAAG
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