EY674872

Overview
NameEY674872
Unique NameEY674872
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1024
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674872 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 3.075e-35
Identity = 67/151 (44.37%), Postives = 94/151 (62.25%), Query Frame = 2
Query:   11 GTTGTPPFKMKEICAFLAHVCCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALRADLLSHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFG 463
            GTTG+   + +E+ AFL     +T+ G+  A  GP AWG C+  E +PS +YC  S +Y  PC PG  YYGRG + + WNYNYG  GEALR +LL +P+ +  +  L+F+ A+W WMTP +  +PS HD   G W+P+  DT + R P +G
Sbjct:   45 GTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRY--PCAPGKSYYGRGPLQLSWNYNYGPCGEALRVNLLGNPDLVATDRVLSFKTALWFWMTP-QAPKPSCHDVLTGRWQPSAADTAAGRLPGYG 192          
BLAST of EY674872 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 4.440e-34
Identity = 66/154 (42.86%), Postives = 94/154 (61.04%), Query Frame = 2
Query:    5 ASGTTGTPPFKMKEICAFLAHVCCKTSCGYG-VATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALRADLLSHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFG 463
            A  TTG    + +EI AFLA    +T+ G G  A  GP AWG CYN E++P  SYC     Y  PC PG +Y+GRG + + WNYNYG  G A+  DLL++P+ +  + T++F++A W WMTP +  +PS H+  +G W P+ +D  + R P +G
Sbjct:  115 AFATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYCASDPNY--PCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTP-QSPKPSCHNVIIGAWSPSSSDRAAGRVPGYG 265          
BLAST of EY674872 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.292e-33
Identity = 64/151 (42.38%), Postives = 91/151 (60.26%), Query Frame = 2
Query:   11 GTTGTPPFKMKEICAFLAHVCCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALRADLLSHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFG 463
            GTTG    + KEI AF      +T+ G+  A  GP +WG C+  E +PS +YC  S ++  PC  G  YYGRG + + WNYNYG  G A+ +DLL++P+ +  +  +AF+AAIW WMTP +  +PS H   VG W+P+  D  + R P +G
Sbjct:  114 GTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAEW--PCASGKSYYGRGPMQLSWNYNYGQCGRAIGSDLLNNPDLVSNDPVIAFKAAIWFWMTP-QSPKPSCHAVIVGQWQPSDADRAAGRVPGYG 261          
BLAST of EY674872 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.687e-33
Identity = 67/153 (43.79%), Postives = 93/153 (60.78%), Query Frame = 2
Query:    5 ASGTTGTPPFKMKEICAFLAHVCCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALRADLLSHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFG 463
            A GTTG    + KEI AFLA    +T+ G+  A  GP +WG CYN E      YC  S ++  PC PG +Y+GRG I I +NYNYGA G A+  +LL++P+ +  +A ++F+ A+W WMT  ++ +PSAHD   G W P+  D+   R P FG
Sbjct:   46 AFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYCASSQQW--PCAPGKKYFGRGPIQISYNYNYGAAGSAIGVNLLNNPDLVANDAVVSFKTALWFWMT-AQQPKPSAHDVITGRWSPSVADSAPGRVPGFG 195          
BLAST of EY674872 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 1.687e-33
Identity = 65/154 (42.21%), Postives = 93/154 (60.39%), Query Frame = 2
Query:    5 ASGTTGTPPFKMKEICAFLAHVCCKTSCGYG-VATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALRADLLSHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFG 463
            A  TTG    + +EI AFLA    +T+ G G  A  GP AWG CYN E++P  SYC     Y  PC PG +Y+GRG + + WNYNYG  G A+  DLL++P+ +  + T++F++A W WMTP +  +PS H+  +G W P+ +D  + R   +G
Sbjct:   93 AFATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYCASDPNY--PCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTP-QSPKPSCHNVIIGAWSPSSSDRAAGRATGYG 243          
BLAST of EY674872 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 6.412e-33
Identity = 64/151 (42.38%), Postives = 93/151 (61.59%), Query Frame = 2
Query:   11 GTTGTPPFKMKEICAFLAHVCCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALRADLLSHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFG 463
            GTTG    K KE+ AFLA    +T+ G+  A  GP AWG C+  E +  + YC       +PC PG +YYGRG I +  NYNYG  G+A++ DL+++P+ +  N T++F+ AIW WMTP + ++PS+HD   G W P+  D+ + R P +G
Sbjct:  123 GTTGDDNTKKKELAAFLAQTSHETTGGWPTAPDGPYAWGYCFVSEQNTQEVYCSPK---DWPCAPGKKYYGRGPIQLTHNYNYGLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTP-QANKPSSHDVITGRWTPSAADSSAGRVPGYG 269          
BLAST of EY674872 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 6.412e-33
Identity = 62/153 (40.52%), Postives = 93/153 (60.78%), Query Frame = 2
Query:    5 ASGTTGTPPFKMKEICAFLAHVCCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALRADLLSHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFG 463
            A G TG    + +E+ AFL     +T+ G+  A  GP +WG C+  E +P   YC  S ++  PC PG +YYGRG I + +N+NYG  G A+  DLLS+P+ +  +AT++F+ A+W WMTP + ++PS+HD   G W P+  D  + R P +G
Sbjct:  130 AFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYCQPSPEW--PCAPGRKYYGRGPIQLSFNFNYGPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTP-QGNKPSSHDVITGRWAPSPADAAAGRAPGYG 279          
BLAST of EY674872 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 8.374e-33
Identity = 65/149 (43.62%), Postives = 91/149 (61.07%), Query Frame = 2
Query:   17 TGTPPFKMKEICAFLAHVCCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALRADLLSHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFG 463
            TG    + +E+ AFLA +  +T+ G+  A  GP AWGLCY  E++P  SYCD + K  +PC PG  Y+GRG I I WN+NYG  G+AL  D L +PE +   + +AF+ A+W WMTP + ++PS H   VG ++P   D  + R   FG
Sbjct:   94 TGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDKQ-WPCYPGKSYHGRGPIQISWNFNYGPAGQALGFDGLRNPEIVANCSDIAFQTALWFWMTP-RDTKPSCHQVMVGEYRPGPADVAANRTAGFG 240          
BLAST of EY674872 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.094e-32
Identity = 65/154 (42.21%), Postives = 94/154 (61.04%), Query Frame = 2
Query:    5 ASGTTGTPPFKMKEICAFLAHVCCKTSCGYG-VATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALRADLLSHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFG 463
            A  TTG    + +E+ AFLA    +T+ G G  A  GP  WG CYN E++P+  YC   +   YPC PG +Y+GRG + + WNYNYG  G A+  DLL++P+ +  + T++F++A W WMTP +  +PS HD  +G W P+ +D  + R P FG
Sbjct:  113 AFATTGDDATRKREVAAFLAQTSHETTGGAGWAAPDGPYTWGYCYNRELNPAD-YCQ--WDPNYPCAPGKQYFGRGPMQLTWNYNYGQCGRAIGVDLLNNPDLLATDPTISFKSAFWFWMTP-QSPKPSCHDVIIGAWSPSGSDQAAGRVPGFG 262          
BLAST of EY674872 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3)

HSP 1 Score: 140.584 bits (353), Expect = 1.428e-32
Identity = 62/151 (41.06%), Postives = 89/151 (58.94%), Query Frame = 2
Query:   11 GTTGTPPFKMKEICAFLAHVCCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALRADLLSHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSKRGPNFG 463
            GTTG    + KE+ AF      +T+ G+  A  GP +WG C+  E +P+  YC+ S   T+PC  G  YYGRG + + WNYNYG  G A+  DLL++P+ +  +A +AF+AAIW WMT  +  +PS H    G W+P+  D  + R P +G
Sbjct:  129 GTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSA--TWPCASGKRYYGRGPMQLSWNYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMT-AQPPKPSCHAVIAGQWQPSDADRAAGRLPGYG 276          
The following BLAST results are available for this feature:
BLAST of EY674872 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
CHIT_CARPA3.075e-3544.37Endochitinase OS=Carica papaya PE=1 SV=1[more]
CHI1_GOSHI4.440e-3442.86Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1[more]
CHI2_BRANA1.292e-3342.38Endochitinase CH25 OS=Brassica napus PE=2 SV=1[more]
CHID_SOLLC1.687e-3343.79Basic endochitinase (Fragment) OS=Solanum lycopers... [more]
CHI2_GOSHI1.687e-3342.21Endochitinase 2 (Fragment) OS=Gossypium hirsutum P... [more]
CHIX_PEA6.412e-3342.38Endochitinase OS=Pisum sativum PE=2 SV=1[more]
CHI2_ORYSJ6.412e-3340.52Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI10_ORYSJ8.374e-3343.62Chitinase 10 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHI1_THECC1.094e-3242.21Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 S... [more]
CHIB_ARATH1.428e-3241.06Basic endochitinase B OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-E10-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674872 ID=EY674872; Name=EY674872; organism=Citrus sinensis; type=EST; length=1024bp
CCTCGCGTCCGGTACCACCGGTACTCCCCCTTTTAAGATGAAGGAGATTT
GCGCTTTTCTTGCCCACGTCTGCTGCAAGACCTCTTGTGGATATGGGGTG
GCCACTGGAGGACCATTGGCCTGGGGACTTTGCTACAACCATGAAATGAG
CCCCAGTCAGTCATATTGTGATGATTCCTACAAATACACATATCCCTGCA
CCCCTGGAGCTGAGTACTACGGCCGAGGTGCTATACCTATATACTGGAAC
TATAACTATGGAGCTACTGGGGAAGCATTGAGGGCGGATCTGTTGAGTCA
TCCTGAATACATTGAGCAGAATGCTACCCTTGCCTTTGAGGCTGCAATTT
GGAAGTGGATGACCCCGGTCAAGAAATCCCAGCCTTCAGCCCATGATGCC
TTTGTTGGCAACTGGAAGCCCACCAAGAATGATACTTTGTCCAAACGGGG
ACCTAACTTTGGGTACCACCAATGAATATTCTCTATGGTGAGAACGTATG
CGGTCAGGGTGATATTTGATGCTATGAACAACATTGTCTCTCATTAATTG
TATTACCTTGATATGTTGGGGGGTGGGTCAATAACAGGCAGGAACCTTAA
TGGAAAAAACTCTTCTTTGTTGCTGAAAAAAAAAACCTTCAACCCCAAAC
ACCCCCGCCTTCTACCTTGCTTCCTTCTGGAGGACTTTTTTTTGTAACCA
AAACTTATTTTTGTGGGAATGGACCCCCCCCCCAAGGGGGGAACCATTTA
ACAAAAAAAAACCGGGGGTAAAAATAAAACATTTGTTTGAAAATTTTTTT
TTTTTTTTTTCTAACTTTATTAAATATTGACCCAAGGGAAACATTAATGT
GTGGGAAATTTGACATCCCCCCCTCTCTTTTTCTCCTTGTTAAAAAATTT
AAAAAATTTTATTTTGTTTATTTAGTAAAAAACATTCTTTTTTTTTTTGC
TGTGTGTGTTAATTTTAATTTTTAGTTGTTTATAGCGTTAGAAATATTCG
TCGTATATTTACAACCCACTTTCC
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