EY674871

Overview
NameEY674871
Unique NameEY674871
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1132
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY674871 vs. ExPASy Swiss-Prot
Match: FTRV_SPIOL (Ferredoxin-thioredoxin reductase, variable chain, chloroplastic OS=Spinacia oleracea GN=FTRV PE=1 SV=2)

HSP 1 Score: 49.2914 bits (116), Expect = 8.482e-11
Identity = 27/62 (43.55%), Postives = 36/62 (58.06%), Query Frame = 2 
Query:  176 ISCEVAVKSNNSTASVGLEXXXXXXXXXXDDGFDESKIGAKVKVKVPLKVYHVPRVPEHDLS 361
            I CEVA+KS++ST                    +  K+G KVKVK PLKVYHVP++PE +L+
Sbjct:   60 ICCEVALKSDSSTGFDSSSSSPPEEDEELKKNLE--KVGCKVKVKSPLKVYHVPKLPEVELT 119

HSP 2 Score: 39.2762 bits (90), Expect = 8.482e-11
Identity = 16/25 (64.00%), Postives = 19/25 (76.00%), Query Frame = 3 
Query:  372 GVLKQYVSVWKGKKISTNMPYKVAF 446
            GV+KQYV  WKGK IS N P+KV +
Sbjct:  124 GVIKQYVGFWKGKYISPNYPFKVEY 148
The following BLAST results are available for this feature:
BLAST of EY674871 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FTRV_SPIOL8.482e-1143.55Ferredoxin-thioredoxin reductase, variable chain, ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-E09-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674871 ID=EY674871; Name=EY674871; organism=Citrus sinensis; type=EST; length=1132bp
ATTAGCAGACGAGCCCTTTGTAAGATACACAGAAATCATGACTAGTACAA
GTTTTGCTTTGTTCTCGGCTACTTCTTCGTTGATAAATCGACGGCCACTT
ACGAATGCGTTTGTCTCAGTTTCTTCATTTTCAGCTGCCAATTGTAGTGA
CAATGTTAATGTTAACAAAAGAAGAATCTCCTGTGAAGTAGCTGTAAAAT
CCAACAATTCAACGGCATCCGTAGGACTAGAGAGCAGTCCATCTTCATCA
GCATCAGCGTCGGATGATGGCTTTGATGAGTCTAAGATTGGTGCGAAGGT
TAAGGTGAAGGTGCCGTTGAAGGTTTACCATGTTCCTAGGGTTCCGGAGC
ATGATCTGTCTGGCATTGGAAGGTGTGCTCAAGCAATACGTCAGCGTTTG
GAAAGGAAAGAAAATCTCAACCAATATGCCTTATAAGGTAGCGTTTGTTA
CTGAAAATTTAAGGCCGTCCTGTCAAGTTCTTTGCACATCTCAAGGGAAA
ACAAGTTTGATTACCTTGAATAAAAATTTTTAAATTTTTAATTAATTTTG
AAAAAGGTTAAATCCTTCCCCTTTTCCAATCACCCATCCACTAAAAAAAA
AATATTTTTTTAACCTTTGTATTGTAAACACCTTCACATGGAAAAATAAT
GCCTTCATTAAAGGTTTTATAGTGGGTTAAAACTTTTCCCCTTGCCAATA
AAAACCCAAACCCTTTTCCTATAATTTTCCTTTACCAAAAAAAAAAAAAA
AAGAAAAAGGGGCAGGGCCCCCCTACCTTAAAGGGAATTACAACACTTTA
TAAAATTAACGTGGTGGAAATTTGCAAAAACGGTATTAAAAACCTTTTTT
CTATTAAAAAATGTGATACAACAAAAAAATATCAAAATTTTACATCTGGT
AGCCCCGATCTGTTTTTTTTTAAACAAGACTTTAATATAGATAAAGGGAG
GAAAAAAAAAAACACCACCTTGTGTTGGTCATTTAAAACCCCCAAAAAAA
TACTATATAAAATAACACCACTCGACCTTTTAAGTGCAAAACAAAAACAA
TTAAGCAAACTACCCACCACCCCCCCCCTACCCTTTGTTTTTTCTTTTTT
TTTTCCTTATTCCCCACTTCCGACAACACGCC
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