EY674866
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY674866 vs. ExPASy Swiss-Prot
Match: RR13_ARATH (30S ribosomal protein S13, chloroplastic OS=Arabidopsis thaliana GN=RPS13 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 3.960e-39 Identity = 80/114 (70.18%), Postives = 93/114 (81.58%), Query Frame = 2 Query: 29 MVQTLAMPVAPALSVICNGHNNNLLTNASLSFPVSKQPQYPGLSIQCARVGGVEIPNNKRIEYSLQYIHGVGRTRARLILVDLKMENKITKDMSEEELITIRDEVSKYMIEGKI 370 M Q +AMPVA +LS+ICN +N L+ +L+ P S P LSI+CARVGGVEIP NKRIEYSLQYIHG+GRTRAR ILVDL+MENKITKDM+EEELI +RDEVSKYMIEG + Sbjct: 1 MAQMVAMPVAHSLSLICNWAKSNPLSRNTLALPASNTPNKQSLSIRCARVGGVEIPANKRIEYSLQYIHGIGRTRARQILVDLQMENKITKDMAEEELIILRDEVSKYMIEGDL 114 HSP 2 Score: 24.6386 bits (52), Expect = 3.960e-39 Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 3 Query: 405 KEIKCYRGNRQILG 446 KEI+CYRG R I G Sbjct: 126 KEIQCYRGVRHIQG 139
BLAST of EY674866 vs. ExPASy Swiss-Prot
Match: RT13_SOYBN (Small ribosomal subunit protein S13, mitochondrial OS=Glycine max GN=RSP13 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.692e-12 Identity = 37/92 (40.22%), Postives = 60/92 (65.22%), Query Frame = 2 Query: 152 GLSIQCARVGGV---EIPNNKRIEYSLQYIHGVGRTRARLILVDLKMENKITKDMSEEELITIRDEVSKYMI-----------EGKIEAVQC 385 G+ +Q +GG EIP+NKR+ Y+LQ +HG+GR++A+ I+ +L +ENK KD+S+ EL +IR+ +SKY+I G++ +QC Sbjct: 23 GVRVQNINIGGGVGGEIPDNKRLVYALQNLHGIGRSKAQHIVAELGVENKFVKDLSKRELYSIRELLSKYLIGNDLKKCVERDVGRLVGIQC 114
BLAST of EY674866 vs. ExPASy Swiss-Prot
Match: RS13_ACIF5 (30S ribosomal protein S13 OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=rpsM PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.692e-12 Identity = 36/69 (52.17%), Postives = 52/69 (75.36%), Query Frame = 2 Query: 170 ARVGGVEIPNNKRIEYSLQYIHGVGRTRARLIL--VDLKMENKITKDMSEEELITIRDEVSKYMIEGKI 370 AR+ GV IPNNK+IE +L YI+G+GRTRAR +L D+ + ++ KD+SE EL IR EV+K+++EG + Sbjct: 2 ARIAGVNIPNNKQIEIALTYIYGIGRTRARTVLSAADIACDMRV-KDISEPELERIRSEVAKFLVEGDL 69
BLAST of EY674866 vs. ExPASy Swiss-Prot
Match: RS13_ACIF2 (30S ribosomal protein S13 OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=rpsM PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.692e-12 Identity = 36/69 (52.17%), Postives = 52/69 (75.36%), Query Frame = 2 Query: 170 ARVGGVEIPNNKRIEYSLQYIHGVGRTRARLIL--VDLKMENKITKDMSEEELITIRDEVSKYMIEGKI 370 AR+ GV IPNNK+IE +L YI+G+GRTRAR +L D+ + ++ KD+SE EL IR EV+K+++EG + Sbjct: 2 ARIAGVNIPNNKQIEIALTYIYGIGRTRARTVLSAADIACDMRV-KDISEPELERIRSEVAKFLVEGDL 69
BLAST of EY674866 vs. ExPASy Swiss-Prot
Match: RS13_MYCGA (30S ribosomal protein S13 OS=Mycoplasma gallisepticum GN=rpsM PE=3 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 1.365e-11 Identity = 35/68 (51.47%), Postives = 50/68 (73.53%), Query Frame = 2 Query: 170 ARVGGVEIPNNKRIEYSLQYIHGVGRTRARLILVDLKME-NKITKDMSEEELITIRDEVSKYMIEGKI 370 AR+ G++IPNNKR+E SL YI+G+G+ RA+ IL K++ NK KD+S+EEL IR S Y++EG + Sbjct: 2 ARILGIDIPNNKRVEISLTYIYGIGKPRAQEILRKAKIDFNKRVKDLSDEELALIRSVASTYVLEGDL 69 The following BLAST results are available for this feature:
BLAST of EY674866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY674866 ID=EY674866; Name=EY674866; organism=Citrus sinensis; type=EST; length=1012bpback to top |