EY674854

Overview
NameEY674854
Unique NameEY674854
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1072
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY674854_ssr1008 microsatellite EY674854_ssr1008:1008..1017. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
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BLAST of EY674854 vs. ExPASy Swiss-Prot
Match: COGT2_ARATH (Cytokinin-O-glucosyltransferase 2 OS=Arabidopsis thaliana GN=UGT85A1 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 6.872e-33
Identity = 70/145 (48.28%), Postives = 104/145 (71.72%), Query Frame = 1 
Query:   31 LFEEKGLFPVKDNRCLTKEYL-NSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEATENASKASAIIIHTFDALEQQVLNALSFMFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYHLLKEETECLQWLDCKEPKSVIYVNF 462
            LF EKGL P+KD   LTKEYL +++ID+IP MK+++++D+PSFI++T+P D+M +  +  TE A +ASAII++TFD LE  V++A+  + P  ++++GPL LL N+  E+   +  +  +L KEE ECL WLD K   SVIY+NF
Sbjct:  162 LFIEKGLCPLKDESYLTKEYLEDTVIDFIPTMKNVKLKDIPSFIRTTNPDDVMISFALRETERAKRASAIILNTFDDLEHDVVHAMQSILP-PVYSVGPLHLLANREIEEGSEIGMMSSNLWKEEMECLDWLDTKTQNSVIYINF 305
[Close]
BLAST of EY674854 vs. ExPASy Swiss-Prot
Match: HMNGT_SORBI (Cyanohydrin beta-glucosyltransferase OS=Sorghum bicolor GN=UGT85B1 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 4.465e-24
Identity = 53/142 (37.32%), Postives = 94/142 (66.20%), Query Frame = 1 
Query:   40 EKGLFPVKDNRCLTKE-YLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEATENASKASAIIIHTFDALEQQVLNALSFMFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYHLLKEETECLQWLDCKEPKSVIYVNF 462
            E+GL P +D   L  + YL++ ++W+PGM  +R+RD+P+F ++TDP D+M +  ++  E+A+ + A+I++T   LE+ V++AL+  FP  ++T+GPL  ++  ++     L ++   + +E+T CL WLD K   SV+YVNF
Sbjct:  169 ERGLVPFRDASLLADDDYLDTPLEWVPGMSHMRLRDMPTFCRTTDPDDVMVSATLQQMESAAGSKALILNTLYELEKDVVDALAAFFP-PIYTVGPLAEVIASSDSASAGLAAMDISIWQEDTRCLSWLDGKPAGSVVYVNF 309
The following BLAST results are available for this feature:
BLAST of EY674854 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
COGT2_ARATH6.872e-3348.28Cytokinin-O-glucosyltransferase 2 OS=Arabidopsis t... [more]
HMNGT_SORBI4.465e-2437.32Cyanohydrin beta-glucosyltransferase OS=Sorghum bi... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-D03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674854 ID=EY674854; Name=EY674854; organism=Citrus sinensis; type=EST; length=1072bp
CCACGCGTCCGGGGATTTAAACAATCCCCTTTATTCGAAGAAAAGGGTCT
TTTCCCAGTCAAAGACAACCGCTGTCTTACGAAAGAGTACTTGAACAGTC
TTATAGACTGGATTCCAGGGATGAAGGATATCCGAATTAGAGATCTTCCA
AGTTTTATTCAATCGACAGATCCGAAAGATATGATGTTCAACTTGTGCGT
GGAAGCAACCGAAAATGCATCCAAAGCTTCAGCAATTATTATTCATACGT
TCGATGCGTTGGAACAACAAGTTTTGAATGCTCTCTCATTTATGTTTCCT
CATCATTTATTCACCATCGGCCCACTTCAGCTTCTTCTCAATCAAACAGA
AGAACAAGATGGTATGCTAAACTCTATTGGTTACCATCTATTGAAAGAAG
AAACAGAGTGTTTGCAATGGCTCGATTGCAAGGAACCCAAATCTGTGATT
TATGTAAATTTTCGGAAGTTTTATATTTATGAATAAACAGCAACTTATTG
AGGTTGCCATGGGGACTTCGTAAATTAGCAATCACCCATTTTTTTTGGAT
AAATCAGGCCTGAATCTTGTTACTGGGGGAAACAGCCAGATTTGGCCGGC
TGAATTTTGAAGGTAAAGGCTAAGGGAAAAAGGTTTTGGTAACTAGTTGG
GGGCCCCCAAGAGGGAATTTACTTAAGCCACCCACTCAATTGGGAGGGAT
TCCTTTATTCCCTGGGGGGATGGGAAATTCCAAAATATTTAAAAAGATTT
ATGGTAAGGGGAATTACCCTAATGATTTGTGTTGGGCCCTTTTTCCCGGG
GAAAAATAACCCACAAAAATGGAGATAAAAACCGCTTTTGGTACAACAAT
GGGGAGGGGAGTTTGGGAATAGGGAGAAAATAAAGGGTGGTGATAAATAT
AAAAAGGAGTGGGTGGGTATAACAAAAAAAATAGTAATGTGGGAAAAAAA
ATATTTTGGGTGTGGATATGAATAGAGAAATTGGAGAGGAGGAGGGGGGT
GGATAAAAGAGAGAGAGGGAGTAAAAACCCACAATTATTTATATGATACT
AACAAAACAAAAGACGCGGGCG
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