EY674852

Overview
NameEY674852
Unique NameEY674852
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1053
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674852 vs. ExPASy Swiss-Prot
Match: RL10_VITRI (60S ribosomal protein L10 OS=Vitis riparia GN=RPL10 PE=2 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 1.381e-70
Identity = 127/134 (94.78%), Postives = 131/134 (97.76%), Query Frame = 1
Query:    7 VRKKGVDQFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKW 408
            ++KKGVD+FPFCVHLVSWEKENVSSEALEAARIACNKYM KYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV+IGQVLLSVRCKD NSHHAQEALRRAKFKFP RQKIIVSRKW
Sbjct:   38 MKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVSIGQVLLSVRCKDGNSHHAQEALRRAKFKFPARQKIIVSRKW 171          
BLAST of EY674852 vs. ExPASy Swiss-Prot
Match: RL10_EUPES (60S ribosomal protein L10 OS=Euphorbia esula GN=RPL10 PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 6.853e-70
Identity = 126/134 (94.03%), Postives = 132/134 (98.51%), Query Frame = 1
Query:    7 VRKKGVDQFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKW 408
            ++KKGVD+FPFCVHLVSWEKENVSSEALEAARIACNKYM K+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQG CARVAIGQVLLSVRCKD+NSH+AQEALRRAKFKFPGRQKIIVSRKW
Sbjct:   38 MKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVRCKDNNSHNAQEALRRAKFKFPGRQKIIVSRKW 171          
BLAST of EY674852 vs. ExPASy Swiss-Prot
Match: RL10_SOLME (60S ribosomal protein L10 OS=Solanum melongena GN=RPL10 PE=2 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 7.577e-69
Identity = 125/134 (93.28%), Postives = 130/134 (97.01%), Query Frame = 1
Query:    7 VRKKGVDQFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKW 408
            +++KGVD+FPFCVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQG CARVAIGQVLLSVRCKD NS+HAQEALRRAKFKFPGRQKIIVSRKW
Sbjct:   38 MKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGVCARVAIGQVLLSVRCKDGNSNHAQEALRRAKFKFPGRQKIIVSRKW 171          
BLAST of EY674852 vs. ExPASy Swiss-Prot
Match: RL101_ARATH (60S ribosomal protein L10-1 OS=Arabidopsis thaliana GN=RPL10A PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.866e-67
Identity = 122/134 (91.04%), Postives = 129/134 (96.27%), Query Frame = 1
Query:    7 VRKKGVDQFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKW 408
            +++KGVD+FPFCVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFGK  GTCARVAIGQVLLSVRCKD++ HHAQEALRRAKFKFPGRQKIIVSRKW
Sbjct:   38 MKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKW 171          
BLAST of EY674852 vs. ExPASy Swiss-Prot
Match: RL102_ARATH (60S ribosomal protein L10-2 OS=Arabidopsis thaliana GN=RPL10B PE=2 SV=2)

HSP 1 Score: 255.373 bits (651), Expect = 4.157e-67
Identity = 121/134 (90.30%), Postives = 129/134 (96.27%), Query Frame = 1
Query:    7 VRKKGVDQFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKW 408
            +++KGVD+FP+CVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFGK  GTCARVAIGQVLLSVRCKD++ HHAQEALRRAKFKFPGRQKIIVSRKW
Sbjct:   38 MKRKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKALGTCARVAIGQVLLSVRCKDAHGHHAQEALRRAKFKFPGRQKIIVSRKW 171          
BLAST of EY674852 vs. ExPASy Swiss-Prot
Match: RL101_ORYSJ (60S ribosomal protein L10-1 OS=Oryza sativa subsp. japonica GN=SC34 PE=2 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 5.430e-67
Identity = 122/134 (91.04%), Postives = 129/134 (96.27%), Query Frame = 1
Query:    7 VRKKGVDQFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKW 408
            ++KKGVD+FP+CVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCK+SN+ HA+EALRRAKFKFPGRQKII SRKW
Sbjct:   38 MKKKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMTKNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKW 171          
BLAST of EY674852 vs. ExPASy Swiss-Prot
Match: RL101_ORYSI (60S ribosomal protein L10-1 OS=Oryza sativa subsp. indica GN=SC34 PE=2 SV=2)

HSP 1 Score: 254.988 bits (650), Expect = 5.430e-67
Identity = 122/134 (91.04%), Postives = 129/134 (96.27%), Query Frame = 1
Query:    7 VRKKGVDQFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKW 408
            ++KKGVD+FP+CVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCK+SN+ HA+EALRRAKFKFPGRQKII SRKW
Sbjct:   38 MKKKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMTKNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKW 171          
BLAST of EY674852 vs. ExPASy Swiss-Prot
Match: RL103_ARATH (60S ribosomal protein L10-3 OS=Arabidopsis thaliana GN=RPL10C PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 3.519e-66
Identity = 121/134 (90.30%), Postives = 128/134 (95.52%), Query Frame = 1
Query:    7 VRKKGVDQFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKW 408
            +++KGVD+FPFCVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKMLSCAGADRLQTGMRGAFGK  GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKW
Sbjct:   38 MKRKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMVKSAGKDAFHLRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKALGTCARVAIGQVLLSVRCKDNHGVHAQEALRRAKFKFPGRQKIIVSRKW 171          
BLAST of EY674852 vs. ExPASy Swiss-Prot
Match: RL10_MAIZE (60S ribosomal protein L10 OS=Zea mays GN=RPL10 PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 5.082e-65
Identity = 118/134 (88.06%), Postives = 126/134 (94.03%), Query Frame = 1
Query:    7 VRKKGVDQFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKW 408
            +++KGVD+FP+CVHLVSWE+ENVSSEALEAARI CNKYM K AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV IGQVLLSVRCKD+N+ HA EALRRAKFKFP RQKII SRKW
Sbjct:   38 MKRKGVDEFPYCVHLVSWERENVSSEALEAARIVCNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKDNNAAHASEALRRAKFKFPARQKIIESRKW 171          
BLAST of EY674852 vs. ExPASy Swiss-Prot
Match: RL10_PINTA (60S ribosomal protein L10 OS=Pinus taeda GN=RPL10 PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.931e-64
Identity = 117/133 (87.97%), Postives = 127/133 (95.49%), Query Frame = 1
Query:   10 RKKGVDQFPFCVHLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKW 408
            +K+ VD+FPFCVHLVSWEKENVSSEALEA RIACNKYM K+AGKD FHLRVRVHPFHVLR NKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVR +D++S+HAQEALRRAKFKFPGR+KIIV+RKW
Sbjct:   39 KKRLVDEFPFCVHLVSWEKENVSSEALEAGRIACNKYMVKFAGKDGFHLRVRVHPFHVLRSNKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRSRDNHSNHAQEALRRAKFKFPGREKIIVNRKW 171          
The following BLAST results are available for this feature:
BLAST of EY674852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
RL10_VITRI1.381e-7094.7860S ribosomal protein L10 OS=Vitis riparia GN=RPL1... [more]
RL10_EUPES6.853e-7094.0360S ribosomal protein L10 OS=Euphorbia esula GN=RP... [more]
RL10_SOLME7.577e-6993.2860S ribosomal protein L10 OS=Solanum melongena GN=... [more]
RL101_ARATH1.866e-6791.0460S ribosomal protein L10-1 OS=Arabidopsis thalian... [more]
RL102_ARATH4.157e-6790.3060S ribosomal protein L10-2 OS=Arabidopsis thalian... [more]
RL101_ORYSJ5.430e-6791.0460S ribosomal protein L10-1 OS=Oryza sativa subsp.... [more]
RL101_ORYSI5.430e-6791.0460S ribosomal protein L10-1 OS=Oryza sativa subsp.... [more]
RL103_ARATH3.519e-6690.3060S ribosomal protein L10-3 OS=Arabidopsis thalian... [more]
RL10_MAIZE5.082e-6588.0660S ribosomal protein L10 OS=Zea mays GN=RPL10 PE=... [more]
RL10_PINTA1.931e-6487.9760S ribosomal protein L10 OS=Pinus taeda GN=RPL10 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-D01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674852 ID=EY674852; Name=EY674852; organism=Citrus sinensis; type=EST; length=1053bp
CCACGCGTCCGGAAGAAAGGCGTCGACCAGTTCCCCTTCTGCGTTCACCT
CGTCAGTTGGGAGAAGGAGAACGTGTCGAGCGAGGCCTTGGAAGCTGCCC
GTATCGCTTGCAACAAGTACATGGCCAAGTACGCCGGCAAGGATGCTTTC
CATTTGCGAGTGAGGGTGCACCCCTTCCATGTTCTGCGTATTAACAAGAT
GCTTTCGTGTGCTGGGGCTGATAGGCTCCAGACTGGAATGAGGGGTGCTT
TTGGAAAGCCCCAAGGAACCTGTGCTCGTGTTGCTATCGGGCAGGTCTTG
CTTTCTGTCCGTTGCAAGGATAGTAACAGCCACCATGCTCAGGAGGCCCT
TCGCCGTGCTAAGTTCAAGTTTCCTGGTCGTCAAAAGATTATTGTCAGCA
GGAAATGGTATGCGTTTTTTTATGCATGACTGCATTCACGTTAAAGTTCT
CTCGTATTTTGCTTGTATTATATGGATTGGGGTGTCACATGGATTAGCAG
ATTAATGGGATTAAGTTGCCTGGGGCTGGTGTCTTCTAGGAGTGAGTAAA
AAAAAAATCTACCTTTTATTTTAATTTTTTTTTCCTTTTTAAAAAAAAAA
ACACCCATCATTTAAATGCCCTGTTGCCTGGTAAATCGCTAGGGTTGGGG
TTTAAAAAAATTTAACCTACGGGTAGGGAAAGGGAACCTTTTGCGGAACA
ACCAATGGGCCAAAAGAAAATTTCCGAATAGATTAACTGTATCGGTAAAA
CGGGGCATTTTTTTTTATTTTTTTTTAAAAACCCAAAAACATAAAAAAAT
TCACCCATTTTAAAAAAATTTTGCTGGGGGTTTTTCTTTTTCCTACAATT
AGAACTTATCTTATTGCGTTTGTCTTATTGAGGGGGTATCTACCCAATAT
TTCCTCTCCTTGCTCCTTTAAATTTCTGGGTGTGAGGGATGAATACCATG
AAGAAAAAAAAATTAATAGTTGTCACATTCAACCGAGTGTGGTGGCCTTT
TTCGTTGTCAGACACGGCTGGCCAGATGCACTTTTTTTGCCCACTTATTT
TAG
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