EY674850

Overview
NameEY674850
Unique NameEY674850
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length973
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY674850 vs. ExPASy Swiss-Prot
Match: 21KD_DAUCA (21 kDa protein OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.681e-23
Identity = 47/87 (54.02%), Postives = 66/87 (75.86%), Query Frame = 2 
Query:  110 AAGIADTRFIRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFRNLKHREYEAIADCLDEMGDT 370
            A+     +FI++SC  TTYPA+C QSLSAYA +IQ +P++LA TAL VSL+R Q A++F+ +L KF+ LK R+Y AI DCL+E+ D+
Sbjct:   20 ASAAPANQFIKTSCTLTTYPAVCEQSLSAYAKTIQNNPQELASTALQVSLTRTQQAQTFMKRLNKFKGLKARQYAAIHDCLEEVEDS 106

HSP 2 Score: 32.7278 bits (73), Expect = 1.681e-23
Identity = 18/56 (32.14%), Postives = 29/56 (51.79%), Query Frame = 3 
Query:  372 VDRLSKSVQELNHMGQAKGQDFLWHMDKR*NMG*CCF*LMKTLELDGVGGKALEGK 539
            +DR+S+S  E+ ++  AKG DF + M              +T  +DG  GK ++GK
Sbjct:  107 LDRVSRSCDEMKNLSHAKGNDFTFRMSNVETWVSAAL-TDETTCMDGFAGKGMDGK 161
The following BLAST results are available for this feature:
BLAST of EY674850 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
21KD_DAUCA1.681e-2354.0221 kDa protein OS=Daucus carota PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-002-C11-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674850 ID=EY674850; Name=EY674850; organism=Citrus sinensis; type=EST; length=973bp
CCCACGCGTCCGGCCCCCTTTTAGCTTTTAATTAGTTTCTGAAAACATGG
CAAAAACCGGCTGTCTTTTGCTATTGCTCTCTCTCCTCTACATTATAAGC
TTGGTCACAGCTGCCGGGATTGCTGACACAAGATTTATCAGAAGTTCTTG
CAAATCCACAACTTATCCAGCGCTGTGCGTGCAGTCTCTCTCAGCTTATG
CCCCATCAATTCAACAAAGCCCCCGGCAACTGGCTGTCACAGCCTTGTCC
GTGAGCCTCTCCAGGGCCCAATCCGCAAAGTCATTCGTGACCAAGCTGAG
GAAGTTCAGGAACCTGAAGCACAGAGAGTATGAGGCGATTGCCGACTGCT
TGGATGAGATGGGTGACACTTGTGGACCGGCTCAGCAAGTCGGTTCAGGA
GCTGAACCACATGGGTCAGGCCAAGGGTCAGGACTTTCTGTGGCACATGG
ACAAACGTTGAAACATGGGTTAGTGCTGCTTTTGACTGATGAAAACACTT
GAACTGGATGGGGTCGGGGGAAAGGCCTTGGAGGGTAAAGGTTAGTCCCT
CTGAAGGGCTCAGGGTGGTTATGGTTGCTCATGTCCCTAACCAAATGCCC
TTTTCATGGAATTCAAAAATTTTGCGGGGGAAAAACTTGAACCCTAAGTT
TAAAACATATGGCATGTGTGAAAGGTATTTAGCCAAAAAATTATGGGGGC
CCTTTTATTATCTTTGGGTTTCAATTTTATAAGTGGAAAAATATAACTCC
CCGCTGTTAAAAATGTGAGGGGTTTAATTTTTATAGGAAATCTCATATAA
AAAAAAGAGACCTTACTTGGAAAAAGTGAACAAAAAAAATTTCTTGGTCG
ATTTTAATGGGGGAAAAAAAGTGTTTTTTTATTGTGAGAGAAAATGTAGA
AAATAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATGAAAAAAATAAA
AAAAAAGGGGGGGGGGGGGCGGG
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