EY674829
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY674829 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.983e-46 Identity = 101/174 (58.05%), Postives = 120/174 (68.97%), Query Frame = 1 Query: 91 MATSAIQQSAFAGRTALRHSHEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPDTFAKNRELDVDHQQMGNACSSWLHLP*NPLQERSEVRQNRLVQGW---RINIL*RGNRLSMANPNFNQDQNILEIWARQV*AYGV 603 MATSAI+QSAFAG+TAL+ +E VRK+G +GGR TMRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP+TFA+NREL+V H + + P + ++ V+ V W I G + NPN Q+IL +WA QV G+ Sbjct: 1 MATSAIEQSAFAGQTALKSQNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFP--EILSKNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGL 170
BLAST of EY674829 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 3.383e-46 Identity = 102/169 (60.36%), Postives = 116/169 (68.64%), Query Frame = 1 Query: 91 MATSAIQQSAFAGRTALRHSHEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPDTFAKNRELDVDHQQMGNACSSWLHLP*NPLQERSEVRQNRLVQGW---RINIL*RGNRLSMANPNFNQDQNILEIWARQV 588 MATSAIQQSAFAG+TAL+ +E VRK+G GGR TMRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP+TFA+NREL+V H + + P + ++ V V W I G + NPN Q+IL IWA QV Sbjct: 1 MATSAIQQSAFAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFP--EILSKNGVTFGEAV--WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQV 165 HSP 2 Score: 79.337 bits (194), Expect = 3.414e-14 Identity = 48/101 (47.52%), Postives = 62/101 (61.39%), Query Frame = 2 Query: 386 LITSKWAMLVALGCIFPEILSKNGVKFGKTDWFKDGA*IFSEGGIDYLWQTPTSIKIKTFWKSGLARYELMGLDERIKKWWQPALGERTELISHLGVTYEP 688 +I +WAML ALGC+FPEILSKNGV FG+ WFK G+ IFSEGG+DYL P I ++ A+ LMG E + P LGE + I + G ++P Sbjct: 99 VIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYL-GNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGP-LGEGLDKI-YPGGAFDP 196
BLAST of EY674829 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 184.882 bits (468), Expect = 5.770e-46 Identity = 100/169 (59.17%), Postives = 117/169 (69.23%), Query Frame = 1 Query: 91 MATSAIQQSAFAGRTALRHSHEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPDTFAKNRELDVDHQQMGNACSSWLHLP*NPLQERSEVRQNRLVQGW---RINIL*RGNRLSMANPNFNQDQNILEIWARQV 588 MATSAIQQSAFAG+TAL+ S+E V K+G GGR++MRRTVKSAP SIWYGPDRPKYLGPFS+Q PSYLTGEFPGDYGWDTAGLSADP+TFAKNREL+V H + + P + ++ V+ V W I G + NPN Q+IL IWA QV Sbjct: 1 MATSAIQQSAFAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP--EILSKNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQV 165
BLAST of EY674829 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.285e-45 Identity = 100/169 (59.17%), Postives = 114/169 (67.46%), Query Frame = 1 Query: 91 MATSAIQQSAFAGRTALRHSHEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPDTFAKNRELDVDHQQMGNACSSWLHLP*NPLQERSEVRQNRLVQGW---RINIL*RGNRLSMANPNFNQDQNILEIWARQV 588 MATSAIQQSAF G+T LR +EF+RK G R TMRRTVKSAP+SIWYGPDRPKYLGPFSEQ PSYLTGEFPGDYGWDTAGLSADP+TFA+NREL+V H + + P L E++ V+ V W I G + NPN Q+IL IWA QV Sbjct: 1 MATSAIQQSAFTGKTGLRQGNEFIRKRGNFGQARFTMRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFP--ELLEKNGVKFGEAV--WFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQV 165
BLAST of EY674829 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2) HSP 1 Score: 183.341 bits (464), Expect = 1.679e-45 Identity = 101/169 (59.76%), Postives = 118/169 (69.82%), Query Frame = 1 Query: 91 MATSAIQQSAFAGRTALRHSHEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPDTFAKNRELDVDHQQMGNACSSWLHLP*NPLQERSEVRQNRLVQGW---RINIL*RGNRLSMANPNFNQDQNILEIWARQV 588 MATS IQQSAFAG+T L+ +E VRKVG +GGR++MRRT+KSAP+SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP+TFAKNREL+V H + + P L ++ V+ V W I G + NPN Q+IL IWA QV Sbjct: 1 MATSTIQQSAFAGQTLLKPQNELVRKVG-GNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFP--ELLAKNGVKFGEAV--WFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQV 164
BLAST of EY674829 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.856e-44 Identity = 101/174 (58.05%), Postives = 117/174 (67.24%), Query Frame = 1 Query: 91 MATSAIQQSAFAGRTALRHSHEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPDTFAKNRELDVDHQQMGNACSSWLHLP*NPLQERSEVRQNRLVQGW---RINIL*RGNRLSMANPNFNQDQNILEIWARQV*AYGV 603 MA SAIQ SAFAG+TAL+ E VRKVGV+DG R +MRRTVK+ PQSIWYG DRPK+LGPFSEQTPSYLTGEFPGDYGWDTAGLSADP+TFAKNREL+V H + + P L ++ V+ V W I G + NPN Q+IL IWA QV G+ Sbjct: 1 MAASAIQSSAFAGQTALKQRDELVRKVGVSDG-RFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFP--ELLSKNGVQFGEAV--WFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGL 169
BLAST of EY674829 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.571e-43 Identity = 98/169 (57.99%), Postives = 113/169 (66.86%), Query Frame = 1 Query: 91 MATSAIQQSAFAGRTALRHSHEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPDTFAKNRELDVDHQQMGNACSSWLHLP*NPLQERSEVRQNRLVQGW---RINIL*RGNRLSMANPNFNQDQNILEIWARQV 588 MAT AIQQSAF G+ + +EF+RKVG GRITMRRTVKSAPQSIWYG DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP+TFA+NREL+V H + + P + ++ V+ V W I G + NPN Q+IL IWA QV Sbjct: 1 MATCAIQQSAFVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFP--EILSKNGVKFGEAV--WFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQV 165
BLAST of EY674829 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 8.070e-40 Identity = 96/169 (56.80%), Postives = 111/169 (65.68%), Query Frame = 1 Query: 91 MATSAIQQSAFAGRTALRHSHEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPDTFAKNRELDVDHQQMGNACSSWLHLP*NPLQERSEVRQNRLVQGW---RINIL*RGNRLSMANPNFNQDQNILEIWARQV 588 MA SA+ Q+ TA R E VR+VG + GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP+TFA+NREL+V H + + P + ++ V+ V W I G + NPN Q+IL IWA QV Sbjct: 1 MAASALHQTTSFLGTAPRRD-ELVRRVGDS-GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFP--EILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQV 163
BLAST of EY674829 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 8.070e-40 Identity = 96/169 (56.80%), Postives = 111/169 (65.68%), Query Frame = 1 Query: 91 MATSAIQQSAFAGRTALRHSHEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPDTFAKNRELDVDHQQMGNACSSWLHLP*NPLQERSEVRQNRLVQGW---RINIL*RGNRLSMANPNFNQDQNILEIWARQV 588 MA SA+ Q+ TA R E VR+VG + GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADP+TFA+NREL+V H + + P + ++ V+ V W I G + NPN Q+IL IWA QV Sbjct: 1 MAASALHQTTSFLGTAPRRD-ELVRRVGDS-GGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFP--EILSKNGVKFGEAV--WFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQV 163
BLAST of EY674829 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 8.923e-39 Identity = 97/176 (55.11%), Postives = 114/176 (64.77%), Query Frame = 1 Query: 91 MAT-SAIQQSAFAGRTALR-HSHEFVRKVGVADGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPDTFAKNRELDVDHQQMGNACSSWLHLP*NPLQERSEVRQNRLVQGW---RINIL*RGNRLSMANPNFNQDQNILEIWARQV*AYGV 603 MAT SAIQ S+ AG+T LR +E V+KVG A RITMRRTV+SAP+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWDTA +SADP+TFAKNREL+V H + + P L ++ ++ V W I G NPN Q+IL IWA QV G+ Sbjct: 1 MATASAIQSSSLAGQTLLRPQQNELVKKVGTAQA-RITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFP--ELLAKNGLKFGEAV--WFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGL 171 HSP 2 Score: 76.2554 bits (186), Expect = 2.890e-13 Identity = 39/75 (52.00%), Postives = 50/75 (66.67%), Query Frame = 2 Query: 386 LITSKWAMLVALGCIFPEILSKNGVKFGKTDWFKDGA*IFSEGGIDYLWQTPTSIKIKTFWKSGLARYELMGLDE 610 +I +WAML ALGC+FPE+L+KNG+KFG+ WFK GA IFSEGG+DY P I ++ + LMGL E Sbjct: 100 VIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAGAQIFSEGGLDYA-GNPNLIHAQSILAIWACQVVLMGLIE 173 The following BLAST results are available for this feature:
BLAST of EY674829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >EY674829 ID=EY674829; Name=EY674829; organism=Citrus sinensis; type=EST; length=934bpback to top |