EY674825
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY674825 vs. ExPASy Swiss-Prot
Match: CHLP_TOBAC (Geranylgeranyl diphosphate reductase, chloroplastic OS=Nicotiana tabacum GN=CHLP PE=2 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 1.386e-74 Identity = 134/148 (90.54%), Postives = 141/148 (95.27%), Query Frame = 3 Query: 3 RPRGLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 446 RPR L RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI+EGSE G RM+DE DLRKYLEKWDKTYWPTYKVLD+LQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYK+V PGNP+EDLKLAVNTIGSLVRANALRREMDKL++ Sbjct: 317 RPRRLQDRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEGSEMGKRMVDESDLRKYLEKWDKTYWPTYKVLDILQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKKVAPGNPIEDLKLAVNTIGSLVRANALRREMDKLSV 464
BLAST of EY674825 vs. ExPASy Swiss-Prot
Match: CHLP_ARATH (Geranylgeranyl diphosphate reductase, chloroplastic OS=Arabidopsis thaliana GN=CHLP PE=1 SV=1) HSP 1 Score: 272.707 bits (696), Expect = 2.213e-72 Identity = 132/148 (89.19%), Postives = 142/148 (95.95%), Query Frame = 3 Query: 3 RPRGLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 446 RPR LS RVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI+EGS+NG +MIDEGDLRKYLEKWDKTY PTY+VLDVLQKVFYRSNPAREAFVEMC DEYVQKMTFDSYLYKRV PG+PLED+KLAVNTIGSLVRANALRRE++KL++ Sbjct: 320 RPRRLSKRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEGSQNGKKMIDEGDLRKYLEKWDKTYLPTYRVLDVLQKVFYRSNPAREAFVEMCNDEYVQKMTFDSYLYKRVAPGSPLEDIKLAVNTIGSLVRANALRREIEKLSV 467
BLAST of EY674825 vs. ExPASy Swiss-Prot
Match: CHLP_ORYSJ (Geranylgeranyl diphosphate reductase, chloroplastic OS=Oryza sativa subsp. japonica GN=CHLP PE=2 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 3.306e-68 Identity = 122/148 (82.43%), Postives = 139/148 (93.92%), Query Frame = 3 Query: 3 RPRGLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANALRREMDKLTI 446 RP+ ++GRV LVGDAAGYVTKCSGEGIYFAAKSGRMCAEAI+ GS NGTRM++E DLR+YL ++D+ YWPTYKVLDVLQKVFYRSN AREAFVEMCAD+YVQ+MTFDSYLYKRVVPGNPL+D+KLAVNTIGSLVRA ALRREM+K+T+ Sbjct: 316 RPKRVAGRVTLVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVAGSANGTRMVEESDLRRYLAEFDRLYWPTYKVLDVLQKVFYRSNAAREAFVEMCADDYVQRMTFDSYLYKRVVPGNPLDDIKLAVNTIGSLVRATALRREMEKVTL 463
BLAST of EY674825 vs. ExPASy Swiss-Prot
Match: CHLP_SYNY3 (Geranylgeranyl diphosphate reductase OS=Synechocystis sp. (strain PCC 6803) GN=chlP PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.444e-47 Identity = 93/139 (66.91%), Postives = 110/139 (79.14%), Query Frame = 3 Query: 3 RPRGLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSLVRANAL 419 RPR + GRVALVGDAAG VTK SGEGIYFAAKS RMCAE I+ S NG R+ E DL++Y+++WDK Y TY VLD+LQ+VFYR++ REAFVEMC+D VQK+TFDSYLYK VVP NPL +K+ TIGSL+R NAL Sbjct: 267 RPRRVVGRVALVGDAAGTVTKSSGEGIYFAAKSARMCAETIVATSNNGQRVPTEADLKQYIKQWDKRYGATYLVLDILQRVFYRTDATREAFVEMCSDIDVQKLTFDSYLYKTVVPANPLVQMKITAKTIGSLLRGNAL 405
BLAST of EY674825 vs. ExPASy Swiss-Prot
Match: BCHP_RHOCA (Geranylgeranyl diphosphate reductase OS=Rhodobacter capsulatus GN=bchP PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.722e-16 Identity = 49/125 (39.20%), Postives = 71/125 (56.80%), Query Frame = 3 Query: 27 VALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIIEGSENGTRMIDEGDLRKYLEKWDKTYWPTYKVLDVLQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKRVVPGNPLEDLKLAVNTIGSL 401 V L GDAAG V SGEGIY+A GR AEA + ++G DL+ + K + +KVL ++Q +Y S+ RE FV +C D VQ+MTF+SY+ K++ PL++LK+ + L Sbjct: 262 VVLSGDAAGVVAPSSGEGIYYAHAGGRYAAEAAMAFLKSGK----PADLKLARAGFMKEHGTVFKVLRMMQDKYYHSDDRRERFVSLCHDVDVQRMTFESYMNKKMTKFQPLKNLKIGFKNLAHL 382 The following BLAST results are available for this feature:
BLAST of EY674825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY674825 ID=EY674825; Name=EY674825; organism=Citrus sinensis; type=EST; length=967bpback to top |