EY674806

Overview
NameEY674806
Unique NameEY674806
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674806 vs. ExPASy Swiss-Prot
Match: FADE_ECOLI (Acyl-coenzyme A dehydrogenase OS=Escherichia coli (strain K12) GN=fadE PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13
Identity = 37/73 (50.68%), Postives = 48/73 (65.75%), Query Frame = -2
Query:    4 SLIGLAFKSPRPGPLVGRQR*PRHQAFAVIPIDTPGVEIGRRHLPLGAAFMNGPNSGKDVFIPLEFLIGGQEM 222
            +++GLAFK   P  L+G          A+IP  TPGVEIGRRH PL   F NGP  GKDVF+P++++IGG +M
Sbjct:  287 TVLGLAFKLSDPEKLLGGAE-DLGITCALIPTTTPGVEIGRRHFPLNVPFQNGPTRGKDVFVPIDYIIGGPKM 358          
BLAST of EY674806 vs. ExPASy Swiss-Prot
Match: FADE_ECO57 (Acyl-coenzyme A dehydrogenase OS=Escherichia coli O157:H7 GN=fadE PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13
Identity = 37/73 (50.68%), Postives = 48/73 (65.75%), Query Frame = -2
Query:    4 SLIGLAFKSPRPGPLVGRQR*PRHQAFAVIPIDTPGVEIGRRHLPLGAAFMNGPNSGKDVFIPLEFLIGGQEM 222
            +++GLAFK   P  L+G          A+IP  TPGVEIGRRH PL   F NGP  GKDVF+P++++IGG +M
Sbjct:  287 TVLGLAFKLSDPEKLLGGAE-DLGITCALIPTTTPGVEIGRRHFPLNVPFQNGPTLGKDVFVPIDYIIGGPKM 358          
BLAST of EY674806 vs. ExPASy Swiss-Prot
Match: FADE_SALTY (Acyl-coenzyme A dehydrogenase OS=Salmonella typhimurium GN=fadE PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.379e-13
Identity = 35/73 (47.95%), Postives = 48/73 (65.75%), Query Frame = -2
Query:    4 SLIGLAFKSPRPGPLVGRQR*PRHQAFAVIPIDTPGVEIGRRHLPLGAAFMNGPNSGKDVFIPLEFLIGGQEM 222
            +++GLAFK   P  L+G +        A+IP  TPGVEIGRRH PL   F NGP  G D+F+P++++IGG +M
Sbjct:  287 TVLGLAFKLSDPDRLLGGEE-ELGITCALIPTSTPGVEIGRRHFPLNVPFQNGPTRGNDIFVPIDYIIGGPKM 358          
BLAST of EY674806 vs. ExPASy Swiss-Prot
Match: FADE_SALTI (Acyl-coenzyme A dehydrogenase OS=Salmonella typhi GN=fadE PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.379e-13
Identity = 35/73 (47.95%), Postives = 48/73 (65.75%), Query Frame = -2
Query:    4 SLIGLAFKSPRPGPLVGRQR*PRHQAFAVIPIDTPGVEIGRRHLPLGAAFMNGPNSGKDVFIPLEFLIGGQEM 222
            +++GLAFK   P  L+G +        A+IP  TPGVEIGRRH PL   F NGP  G D+F+P++++IGG +M
Sbjct:  287 TVLGLAFKLSDPDRLLGGEE-ELGITCALIPTSTPGVEIGRRHFPLNVPFQNGPTRGNDIFVPIDYIIGGPKM 358          
BLAST of EY674806 vs. ExPASy Swiss-Prot
Match: FADE_YERPE (Acyl-coenzyme A dehydrogenase OS=Yersinia pestis GN=fadE PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.325e-11
Identity = 34/73 (46.58%), Postives = 46/73 (63.01%), Query Frame = -2
Query:    4 SLIGLAFKSPRPGPLVGRQR*PRHQAFAVIPIDTPGVEIGRRHLPLGAAFMNGPNSGKDVFIPLEFLIGGQEM 222
            +++GLAFK   P  L+G          A+IP  TPGVEIG RH PL   F NGP  G D+F+P++++IGG +M
Sbjct:  287 TVLGLAFKLSDPEHLLG-DTVDLGITCALIPTHTPGVEIGHRHFPLNIPFQNGPTRGNDIFVPIDYIIGGPQM 358          
BLAST of EY674806 vs. ExPASy Swiss-Prot
Match: HEMX_PROMI (Putative uroporphyrinogen-III C-methyltransferase (Fragment) OS=Proteus mirabilis GN=hemX PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.951e-11
Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = -2
Query:    4 AVIPIDTPGVEIGRRHLPLGAAFMNGPNSGKDVFIPLEFLIGGQEM 141
            A+IP D  GVEIG RH PL   FMNGP  GKDVF+P++F+IGG +M
Sbjct:   84 ALIPTDVKGVEIGHRHFPLNVPFMNGPTRGKDVFVPIDFIIGGPKM 129          
The following BLAST results are available for this feature:
BLAST of EY674806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
FADE_ECOLI3.153e-1350.68Acyl-coenzyme A dehydrogenase OS=Escherichia coli ... [more]
FADE_ECO574.118e-1350.68Acyl-coenzyme A dehydrogenase OS=Escherichia coli ... [more]
FADE_SALTY5.379e-1347.95Acyl-coenzyme A dehydrogenase OS=Salmonella typhim... [more]
FADE_SALTI5.379e-1347.95Acyl-coenzyme A dehydrogenase OS=Salmonella typhi ... [more]
FADE_YERPE1.325e-1146.58Acyl-coenzyme A dehydrogenase OS=Yersinia pestis G... [more]
HEMX_PROMI2.951e-1163.04Putative uroporphyrinogen-III C-methyltransferase ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-001-G01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674806 ID=EY674806; Name=EY674806; organism=Citrus sinensis; type=EST; length=706bp
GAGCATTTCCTGGCCACCGATCAGGAACTCCAGGGGAATGAACACGTCCT
TGCCGGAATTGGGGCCGTTCATGAACGCGGCACCCAATGGCAGGTGACGG
CGGCCGATTTCAACGCCCGGAGTGTCAATGGGGATCACCGCGAAGGCTTG
ATGCCTAGGTCATCTTTGACGCCCAACAAGTGGTCCGGGACGTGGGGACT
TGAAGGCCAAGCCAATCAGGGAACCCCACAGAACCGAGGGTGATGTCACT
ATTATTTCCAATTCAGGCGCAAGGCGAGGGGTTCCTTTGCTTTCCATTCT
TCCTTGCAAATCAACCCGTGTTCTGCCAGGAACCAGCATAACGAAACACA
CAATAGAACTAGTAAGGGGCAAACAAGATAATATAATTAACACGGAAAAA
GATAGGAAAGTAAAGGTAGTATATATAAAAAAAAAGCATAAAAAAATAGA
AATTAGGACAGAGCCACGGAGAAGGGATAAAATTAGCCATGAAAGGAAAG
GGAACCTTAGGGGGTACAACAGTTTATACATTCACTGAAAATGGTAATAT
AAGAGAAAATACAATGACATGAAAATATCTTTGGAAAATAATAGTGGATA
AATACATAAATATATAATTATGACACGGAAAAGGCAGTGAAATAAAATGA
AAATAAGAATATAACTAAATAGAAAAAAATGTGAAAAATATAAAAGAAAA
ATAACA
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