EY679508

Overview
NameEY679508
Unique NameEY679508
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY679508 vs. ExPASy Swiss-Prot
Match: ARR11_ARATH (Two-component response regulator ARR11 OS=Arabidopsis thaliana GN=ARR11 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.926e-19
Identity = 48/66 (72.73%), Postives = 53/66 (80.30%), Query Frame = 2 
Query:  191 FNPAGLRVLVVDDDLAWLKILEKKLKECSYEVPKGGLTKKAKSLLR*RKDGYDIVILDVNMPKMEG 388
            F+P GLRVLVVDDD  WLKILEK LK+CSYEV   GL ++A  LLR RKDGYDIVI DVNMP M+G
Sbjct:    6 FSPVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMPDMDG 71
[Close]
BLAST of EY679508 vs. ExPASy Swiss-Prot
Match: ARR1_ARATH (Two-component response regulator ARR1 OS=Arabidopsis thaliana GN=ARR1 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 5.079e-12
Identity = 38/64 (59.38%), Postives = 45/64 (70.31%), Query Frame = 2 
Query:  197 PAGLRVLVVDDDLAWLKILEKKLKECSYEVPKGGLTKKAKSLLR*RKDGYDIVILDVNMPKMEG 388
            P+GLRVLVVDDD   L ILE+ L+ C YEV K    + A SLLR  K G+DIVI DV+MP M+G
Sbjct:   34 PSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDMDG 97
[Close]
BLAST of EY679508 vs. ExPASy Swiss-Prot
Match: ARR2_ARATH (Two-component response regulator ARR2 OS=Arabidopsis thaliana GN=ARR2 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.300e-11
Identity = 37/64 (57.81%), Postives = 43/64 (67.19%), Query Frame = 2 
Query:  197 PAGLRVLVVDDDLAWLKILEKKLKECSYEVPKGGLTKKAKSLLR*RKDGYDIVILDVNMPKMEG 388
            PA LRVLVVDDD   L ILE+ L  C Y V K    + A SLLR  K+G+DIVI DV+MP M+G
Sbjct:   25 PANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKNKNGFDIVISDVHMPDMDG 88
The following BLAST results are available for this feature:
BLAST of EY679508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ARR11_ARATH1.926e-1972.73Two-component response regulator ARR11 OS=Arabidop... [more]
ARR1_ARATH5.079e-1259.38Two-component response regulator ARR1 OS=Arabidops... [more]
ARR2_ARATH4.300e-1157.81Two-component response regulator ARR2 OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-401-052-A01-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679508 ID=EY679508; Name=EY679508; organism=Citrus sinensis; type=EST; length=891bp
ATACAGATACAAATAAAAAAACCCCCTTTTAAAGTGCGGCTAAGANAACG
CTTCACTTCTCATTCTTTTTCAATATCCGACCAATTAACTGACTCTTCTT
TCTTCTGTAATTTTGGTTGAACTAGAGCTAGCTAGCTCTTTTGCAATTTG
CGTGATGGAGAAAGGTATCTCCTCTCCAAGAAACGACACCTTTAATCCTG
CCGGACTCCGCGTTCTTGTTGTTGATGATGATCTAGCGTGGCTCAAAATT
CTAGAAAAGAAGCTCAAAGAGTGTTCCTATGAAGTACCCAAAGGTGGTTT
AACTAAAAAAGCAAAGAGCTTGCTTCGCTAGAGAAAAGATGGATATGACA
TTGTAATCTTGGATGTAAACATGCCAAAAATGGAAGGAAATTAAACTCCT
TGATCATGTTGGAGAAGGAGATGAATAAACAAATACAACTGATGGCACGT
GGAAGGAAAAAAAGACAGGTAAAGGAAATGCGATAAACATGAAGCCAAGA
AAGTACCTTATTAAACAAAAAGAAAGAGAAAACTCCGCAATAATTGTAAG
CAGGGTCTTCATAAAAAAAATACAAAAAGGAAAAAAAAATATAAAACATT
AAAGGGGATTAAATAAAATAACACTAATATAATAATAGTATAAAATAATA
CAGTTGAAGAAACCATGTCTAATCGAATAAATATACGACTCCGAGGTAGA
AAAAGAAAAATATAGTCACATACAGGATAGGAGAAAAGAGAAGGGAGGCA
AACAACATTCAAAAAAAAGAGGTAAAGAGTGATTAAAATGATAGAACAAC
AATGTAAATAAAGATGAAAATCAAATGATAATATAAAAAAAAAATAATAT
AAACAAGTGTAAAAATAAAGGTTCCAAATGAGACACACGGA
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