EY674792

Overview
NameEY674792
Unique NameEY674792
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1035
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY674792 vs. ExPASy Swiss-Prot
Match: DDH_HAEIN (2-hydroxyacid dehydrogenase homolog OS=Haemophilus influenzae GN=ddh PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.233e-39
Identity = 66/134 (49.25%), Postives = 89/134 (66.42%), Query Frame = 1
Query:   46 QRLGLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVEALGARYVSLHELLGESQIIGLHCPLTADSINLDYAQSLA 447
            Q LG+ +VRVPAYSP AVAEH + L++ LNRR+HRAY RTR+ +FSL GL GF++           +IG    +I+ GFG  +LAYDP+ NP VE LG +YV L EL  +S +I LHCP T ++ +L   ++ A
Sbjct:   88 QELGIQVVRVPAYSPEAVAEHTIGLMMTLNRRIHRAYQRTREANFSLEGLIGFNMYGRTVGVIGTGKIGIAVMRILKGFGMNILAYDPFKNPVVEELGGQYVELDELYAKSHVITLHCPATPENYHLLNCEAFA 221          

HSP 2 Score: 45.4394 bits (106), Expect = 1.233e-39
Identity = 20/46 (43.48%), Postives = 32/46 (69.57%), Query Frame = 2
Query:  437 KAWPHMQPGAMLINTGRGGLVDTPALINPLKEGQLGYLGLGVNEKK 574
            +A+  M+ G M++NT RG L+DT A I+ LK+ ++G LG+ V E +
Sbjct:  218 EAFAKMKDGVMIVNTSRGSLIDTQAAIDALKQRKIGALGMDVYENE 263          
BLAST of EY674792 vs. ExPASy Swiss-Prot
Match: LDHD_ECOLI (D-lactate dehydrogenase OS=Escherichia coli (strain K12) GN=ldhA PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.949e-38
Identity = 65/127 (51.18%), Postives = 84/127 (66.14%), Query Frame = 1
Query:   46 QRLGLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVEALGARYVSLHELLGESQIIGLHCPLTADSINL 426
            + LGL +VRVPAY P AVAEHA+ +++ LNRR+HRAY RTRD +FSL GLTGF +           +IG    +I+ GFG +LLA+DPYP+     LG  YV L  L  ES +I LHCPLT ++ +L
Sbjct:   88 KELGLKVVRVPAYDPEAVAEHAIGMMMTLNRRIHRAYQRTRDANFSLEGLTGFTMYGKTAGVIGTGKIGVAMLRILKGFGMRLLAFDPYPSAAALELGVEYVDLPTLFSESDVISLHCPLTPENYHL 214          

HSP 2 Score: 42.3578 bits (98), Expect = 2.949e-38
Identity = 19/45 (42.22%), Postives = 29/45 (64.44%), Query Frame = 2
Query:  440 AWPHMQPGAMLINTGRGGLVDTPALINPLKEGQLGYLGLGVNEKK 574
            A+  M+ G M++NT RG L+D+ A I  LK  ++G LG+ V E +
Sbjct:  219 AFEQMKNGVMIVNTSRGALIDSQAAIEALKNQKIGSLGMDVYENE 263          
BLAST of EY674792 vs. ExPASy Swiss-Prot
Match: DDH1_SCHPO (2-hydroxyacid dehydrogenase homolog 1 OS=Schizosaccharomyces pombe GN=SPAC186.07c PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.337e-33
Identity = 58/125 (46.40%), Postives = 85/125 (68.00%), Query Frame = 1
Query:   55 GLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAK-IMAGFGCQLLAYDPYPNPQVEALGARYVSLHELLGESQIIGLHCPLTADSINL 426
            G+ +VRVPAYSP+AVAE+ + L+L+LNR++HRAY R R+ DF+L+GL G DL           +IG   AK +  GFGC++LA+D  PN ++E  G ++V   E+L ++  + LHCPLT D+ +L
Sbjct:   91 GITVVRVPAYSPYAVAEYTIGLLLSLNRKIHRAYVRVREDDFNLNGLLGHDLHGKTIGLLGTGRIGGLVAKCLKLGFGCEVLAHDIKPNKELEKFGIQFVEQQEVLAKADFLCLHCPLTPDTEHL 215          

HSP 2 Score: 41.9726 bits (97), Expect = 7.337e-33
Identity = 19/39 (48.72%), Postives = 26/39 (66.67%), Query Frame = 2
Query:  452 MQPGAMLINTGRGGLVDTPALINPLKEGQLGYLGLGVNE 568
            M+ G  +INT RGGLVDT AL+  ++ GQ+G   + V E
Sbjct:  224 MKKGVKIINTSRGGLVDTKALVKAIESGQVGGCAMDVYE 262          
BLAST of EY674792 vs. ExPASy Swiss-Prot
Match: DDH_ZYMMO (2-hydroxyacid dehydrogenase homolog OS=Zymomonas mobilis GN=ddh PE=3 SV=3)

HSP 1 Score: 116.316 bits (290), Expect = 2.749e-32
Identity = 58/136 (42.65%), Postives = 90/136 (66.18%), Query Frame = 1
Query:   46 QRLGLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAKIMA-GFGCQLLAYDPYPNPQV-EALGARYVSLHELLGESQIIGLHCPLTADSINLDYAQSLA 447
            ++L + +VRVPAYSP++VAE+AV ++L LNR++ R   R R+ +FSL GL G D+            IG+ FA IM  GFG  ++AY P+P+P++ + +G R+ SL E++  S II LHCPLT ++ ++   ++LA
Sbjct:   88 KKLNIKVVRVPAYSPYSVAEYAVGMLLTLNRQISRGLKRVRENNFSLEGLIGLDVHDKTVGIIGVGHIGSVFAHIMTHGFGANVIAYKPHPDPELAKKVGFRFTSLDEVIETSDIISLHCPLTPENHHMINEETLA 223          

HSP 2 Score: 44.669 bits (104), Expect = 2.749e-32
Identity = 26/64 (40.62%), Postives = 36/64 (56.25%), Query Frame = 2
Query:  461 GAMLINTGRGGLVDTPALINPLKEGQLGYLGLGVNEKKGHPCFSKTPRICQLQNDVLGGTVEFP 652
            G  L+NT RGGLVDT A+I  LK   LG     V E++G P F +      +++D+L   + FP
Sbjct:  228 GFYLVNTSRGGLVDTKAVIKSLKAKHLGGYAADVYEEEG-PLFFENHADDIIEDDILERLIAFP 290          
BLAST of EY674792 vs. ExPASy Swiss-Prot
Match: DDH2_SCHPO (2-hydroxyacid dehydrogenase homolog 2 OS=Schizosaccharomyces pombe GN=SPAC186.02c PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.282e-28
Identity = 54/131 (41.22%), Postives = 83/131 (63.36%), Query Frame = 1
Query:   58 LPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAK-IMAGFGCQLLAYDPYPNPQVEALGARYVSLHELLGESQIIGLHCPLTADSINLDYAQSLA 447
            + +V VP+YSP AV+E  V L+L+LNR++HRAY R R+ DF++ GL G D+           +IG+  AK    GFGC +LAYD  P+ ++E  G ++V  +E+L ++  + LHCPLT  + ++  + SLA
Sbjct:   92 ITVVHVPSYSPFAVSEFTVGLLLSLNRKIHRAYVRVREDDFNIVGLLGCDIHGKTVGVIGTGKIGSNVAKCFKMGFGCDVLAYDINPDKKLENYGVQFVEQNEVLKKADFLCLHCPLTPSTTHIVNSDSLA 222          

HSP 2 Score: 40.817 bits (94), Expect = 1.282e-28
Identity = 17/39 (43.59%), Postives = 26/39 (66.67%), Query Frame = 2
Query:  452 MQPGAMLINTGRGGLVDTPALINPLKEGQLGYLGLGVNE 568
            M+ G  ++NT RGGL+DT AL++ +  GQ+G   + V E
Sbjct:  224 MKKGVTIVNTSRGGLIDTKALVDAIDSGQVGGCAIDVYE 262          
BLAST of EY674792 vs. ExPASy Swiss-Prot
Match: LDHD_DICDI (Putative D-lactate dehydrogenase OS=Dictyostelium discoideum GN=ldhA PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.585e-25
Identity = 50/134 (37.31%), Postives = 87/134 (64.93%), Query Frame = 1
Query:   49 RLGLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAKIM-AGFGCQLLAYDPYPNPQVEALGARYV-SLHELLGESQIIGLHCPLTADSINLDYAQSL 444
            +LG+P++RVPAYSP+AV+E+A++LI+ALNR+ H+A++R RD +F ++G+ GF++            IG    +++  GFG +++AYD   N  V  +G  YV +L E+  +  +I LH PL + +  +  ++S+
Sbjct:   88 KLGIPVLRVPAYSPNAVSEYALSLIMALNRKTHKAHDRVRDANFEINGMEGFNMVSKVYGIVGTGNIGEQLCRVLKLGFGAKVIAYDIIENKAVTDIGIEYVKTLDEIWKQCDVISLHTPLNSQTKYMVNSESI 221          

HSP 2 Score: 34.6538 bits (78), Expect = 1.585e-25
Identity = 17/41 (41.46%), Postives = 24/41 (58.54%), Query Frame = 2
Query:  452 MQPGAMLINTGRGGLVDTPALINPLKEGQLGYLGLGVNEKK 574
            M+ G M+IN  RG LV+    I  LK G++  LG+ V E +
Sbjct:  224 MRDGVMIINVSRGALVNASDAIVGLKSGKISSLGMDVYENE 264          
BLAST of EY674792 vs. ExPASy Swiss-Prot
Match: VANH_ENTFA (D-specific alpha-keto acid dehydrogenase OS=Enterococcus faecalis GN=vanHB PE=2 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 5.854e-17
Identity = 44/127 (34.65%), Postives = 64/127 (50.39%), Query Frame = 1
Query:   46 QRLGLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVEALGARYVSLHELLGESQIIGLHCPLTADSINL 426
            +R+G+ +  V AYSP +VA++A+ L+L   R      +     +F L  + G +L            IG    K + GFGC++LAYD         + A YV L ELL  S I+ LH PL AD+ +L
Sbjct:   92 ERMGISVGTV-AYSPDSVADYALMLMLMAIRGAKSTIHAVAQQNFRLDCVRGKELRDMTVGVIGTGHIGQAVVKRLRGFGCRVLAYD-----NSRKIEADYVQLDELLKNSDIVTLHVPLCADTRHL 212          

HSP 2 Score: 42.743 bits (99), Expect = 5.854e-17
Identity = 22/39 (56.41%), Postives = 26/39 (66.67%), Query Frame = 2
Query:  452 MQPGAMLINTGRGGLVDTPALINPLKEGQLGYLGLGVNE 568
            M+ GA LINTGRG LVDT +L+  L  G+LG   L V E
Sbjct:  221 MKQGAFLINTGRGALVDTGSLVEALGSGKLGGAALDVLE 259          
BLAST of EY674792 vs. ExPASy Swiss-Prot
Match: DHD2_LACPA (D-2-hydroxyisocaproate dehydrogenase OS=Lactobacillus paracasei PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 7.605e-17
Identity = 42/124 (33.87%), Postives = 63/124 (50.81%), Query Frame = 1
Query:   46 QRLGLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHG-LTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYP----NPQVEALGARYVSLHELLGESQIIGLHCP 402
            ++ G+ +  VPAYSP A+AE A+   L L R + +   + + GD+   G   G +L            IG    K+  GFG +++AYDPYP    +P  +     YVSL +L  +S +I LH P
Sbjct:   88 KQYGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYEKAGTFIGKELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKGDHPDFD-----YVSLEDLFKQSDVIDLHVP 206          

HSP 2 Score: 41.2022 bits (95), Expect = 7.605e-17
Identity = 18/39 (46.15%), Postives = 28/39 (71.79%), Query Frame = 2
Query:  452 MQPGAMLINTGRGGLVDTPALINPLKEGQLGYLGLGVNE 568
            M+PGA++INT R  L+DT A+++ LK G+L  +G+   E
Sbjct:  223 MKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDTYE 261          
BLAST of EY674792 vs. ExPASy Swiss-Prot
Match: LDHD_PEDAC (D-lactate dehydrogenase OS=Pediococcus acidilactici GN=ldhD PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.670e-16
Identity = 39/123 (31.71%), Postives = 61/123 (49.59%), Query Frame = 1
Query:   58 LPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNPQVEALGARYVSLHELLGESQIIGLHCPLTADSINL 426
            + I  VPAYSP A+AE +V  +LAL R++     +   GD+      G +L           +IG     I   FG +++AYD + NP +E  G    +L EL  ++ +I LH P   D+ ++
Sbjct:   92 IKISNVPAYSPRAIAELSVTQLLALLRKIPEFEYKMAHGDYRWEPDIGLELNQMTVGVIGTGRIGRAAIDIFKPFGAKVIAYDVFRNPALEKEGMYVDTLEELYQQANVITLHVPALKDNYHM 214          

HSP 2 Score: 38.891 bits (89), Expect = 3.670e-16
Identity = 19/46 (41.30%), Postives = 26/46 (56.52%), Query Frame = 2
Query:  437 KAWPHMQPGAMLINTGRGGLVDTPALINPLKEGQLGYLGLGVNEKK 574
            KA+  MQ G  ++N  RG LVDTPAL+  L  G++    L   E +
Sbjct:  218 KAFGQMQDGTFILNFARGTLVDTPALLKALDSGKVAGAALDTYENE 263          
BLAST of EY674792 vs. ExPASy Swiss-Prot
Match: SERA_MYCTU (D-3-phosphoglycerate dehydrogenase OS=Mycobacterium tuberculosis GN=serA PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.712e-16
Identity = 47/150 (31.33%), Postives = 76/150 (50.67%), Query Frame = 1
Query:    1 RAGPGPGFTGRPARRQRLGLPIVRVPAYSPHAVAEHAVALILALNRRLHRAYNRTRDGDFSLHGLTGFDLXXXXXXXXXXXQIGATFAKIMAGFGCQLLAYDPYPNP-QVEALGARYVSLHELLGESQIIGLHCPLTADSINLDYAQSLA 447
            RAG G       A   R G+ +V  P  + H+ AEHA+AL+LA +R++  A    R+  +     +G ++           +IG   A+ +A FG  ++AYDPY +P +   LG   +SL +LL  +  I +H P T ++  L   ++LA
Sbjct:   71 RAGVGLDNVDVDAATAR-GVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLARADFISVHLPKTPETAGLIDKEALA 219          

HSP 2 Score: 33.8834 bits (76), Expect = 4.712e-16
Identity = 15/36 (41.67%), Postives = 22/36 (61.11%), Query Frame = 2
Query:  455 QPGAMLINTGRGGLVDTPALINPLKEGQLGYLGLGV 562
            +PG +++N  RGGLVD  AL + +  G +   GL V
Sbjct:  222 KPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDV 257          
The following BLAST results are available for this feature:
BLAST of EY674792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
DDH_HAEIN1.233e-3949.252-hydroxyacid dehydrogenase homolog OS=Haemophilus... [more]
LDHD_ECOLI2.949e-3851.18D-lactate dehydrogenase OS=Escherichia coli (strai... [more]
DDH1_SCHPO7.337e-3346.402-hydroxyacid dehydrogenase homolog 1 OS=Schizosac... [more]
DDH_ZYMMO2.749e-3242.652-hydroxyacid dehydrogenase homolog OS=Zymomonas m... [more]
DDH2_SCHPO1.282e-2841.222-hydroxyacid dehydrogenase homolog 2 OS=Schizosac... [more]
LDHD_DICDI1.585e-2537.31Putative D-lactate dehydrogenase OS=Dictyostelium ... [more]
VANH_ENTFA5.854e-1734.65D-specific alpha-keto acid dehydrogenase OS=Entero... [more]
DHD2_LACPA7.605e-1733.87D-2-hydroxyisocaproate dehydrogenase OS=Lactobacil... [more]
LDHD_PEDAC3.670e-1631.71D-lactate dehydrogenase OS=Pediococcus acidilactic... [more]
SERA_MYCTU4.712e-1631.33D-3-phosphoglycerate dehydrogenase OS=Mycobacteriu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-001-E03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY674792 ID=EY674792; Name=EY674792; organism=Citrus sinensis; type=EST; length=1035bp
CGTGCGGGTCCGGGTCCGGGATTCACGGGTCGACCTGCCCGCCGCCAACG
CCTGGGCCTCCCTATAGTGCGGGTGCCGGCCTATTCGCCCCATGCGGTGG
CCGAACATGCGGTCGCACTGATCCTGGCCCTCAATCGCCGCCTGCACCGC
GCCTACAACCGTACCCGCGACGGTGACTTCAGCCTGCATGGCCTGACCGG
TTTCGACCTGGTGGGCAAGACCGTCGGCGTGGTCGGCACCGGGCAGATCG
GCGCCACATTCGCCAAGATCATGGCCGGGTTCGGCTGCCAGTTGCTGGCG
TACGATCCTTACCCCAACCCGCAGGTCGAGGCCCTCGGTGCGCGCTATGT
GAGCCTGCATGAGTTGCTGGGCGAGTCGCAGATCATCGGCCTGCATTGCC
CGCTGACGGCGGACAGCATAAACCTGGATTACGCCCAAAGCCTGGCCCCA
TATGCAGCCCGGCGCGATGCTGATAAATACCGGGCGCGGGGGCCTGGTGG
ACACCCCGGCGCTGATTAACCCACTCAAGGAAGGCCAACTCGGCTATCTG
GGGCTGGGAGTGAATGAAAAAAAAGGCCACCCTTGTTTTTCAAAAACACC
TCGGATTTGCCAACTGCAAAACGACGTATTGGGGGGCACTGTTGAATTTC
CCCTAACTTATCTTCATCCTCCCACCAGGCCTTTTTTGATCTCCTAGGCC
TTGGGGGGGGAATTGAATGCAAAAAACCTTTTCCAAATTCACCGGCGAGG
TGCTGGGGGGGAAGGGGCAAAACCTCTCTCTAAAGAATTATTAAGCGGTC
AATATTACCCTCCTATAATACAGGGTGAGGTGCCCGTTAAAATGAAACCA
ACCCCCTATTTTATGAGAAAAAAGTGGACAAAAACCAAATTTTTTCTCTT
TTTAAATTTTGGTAGAAATACCCCACAATAACATACTATGAAAATTATAA
ATAGGACGAATTACCCTGATAGATGACGGGAGGTAATATATTTAATAATT
GTTATTTACCGATGGATAAGACGGGTGAGGGAGTA
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