EY655523

Overview
NameEY655523
Unique NameEY655523
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY655523 vs. ExPASy Swiss-Prot
Match: PSMD1_DROME (26S proteasome non-ATPase regulatory subunit 1 OS=Drosophila melanogaster GN=Rpn2 PE=1 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.997e-42
Identity = 90/201 (44.78%), Postives = 138/201 (68.66%), Query Frame = 1
Query:  157 VSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQLAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAESNDEAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLG*L*ESITRSDNVHGTLSYWITSLIPLLIER-YRPEVRRPL 756
            ++SA G++++L+E  P LK+ AL  L++ VD+FWPEIS S+  IE L+ED  F +++  LA ++ SKVFY+LG   D+L+YALGAG LFDV+  ++Y  T++AK ID Y + + +  E+  EA+ VD RLE IV RM+ +C+ D +++QA+GIA+E RR+    ++I +SD+V G L+Y     + L+  R +R EV R L
Sbjct:    3 LTSAAGIISLLDEPMPDLKVFALKKLDNIVDEFWPEISESIEKIEMLHEDRSFPENK--LAGMVASKVFYHLGSFEDALTYALGAGDLFDVNARNEYTETIIAKCIDFYIAQRVEFIENPKEASVVDERLEGIVNRMIQRCLDDNQFRQALGIALETRRMDTFKDAIMKSDDVRGMLAYAYNVTMSLIQNRGFRNEVLRCL 201          
BLAST of EY655523 vs. ExPASy Swiss-Prot
Match: PSMD1_CHICK (26S proteasome non-ATPase regulatory subunit 1 OS=Gallus gallus GN=PSMD1 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 7.588e-42
Identity = 97/206 (47.09%), Postives = 137/206 (66.50%), Query Frame = 1
Query:  154 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQLAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAE-SNDEAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLG*L*ESITRSDNVHGTLSYWITSLIPLL-IERYRPEVRRPLRKV 765
            M++SA G++++L+E  P LK  AL  LN+ V+ FW EIS SV  IE LYEDE F    RQ AAL+ SKVFY+LG   +SL+YALGAG LF+V+++S+YV T++AK ID Y     + AE    E   VD RLE IV +M  +C+ D KY+QA+GIA+E RRL    ++I  S++V G L+Y +   + L+  +++R +V R L K+
Sbjct:    1 MITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQFAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENAELPEGEKKPVDERLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDIFEKTILESNDVPGMLAYSLKLCMSLMQNKQFRNKVLRVLVKI 204          
BLAST of EY655523 vs. ExPASy Swiss-Prot
Match: PSMD1_RAT (26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus GN=Psmd1 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.208e-41
Identity = 95/206 (46.12%), Postives = 137/206 (66.50%), Query Frame = 1
Query:  154 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQLAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAE-SNDEAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLG*L*ESITRSDNVHGTLSYWITSLIPLL-IERYRPEVRRPLRKV 765
            M++SA G++++L+E  P LK  AL  LN+ V+ FW EIS SV  IE LYEDE F    RQ AAL+ SKVFY+LG   +SL+YALGAG LF+V+++S+YV T++AK ID Y     + A+    E   +D RLE IV +M  +C+ D KY+QA+GIA+E RRL    ++I  S++V G L+Y +   + L+  +++R +V R L K+
Sbjct:    1 MITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQFAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPEGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYSLKLCMSLMQNKQFRNKVLRVLVKI 204          
BLAST of EY655523 vs. ExPASy Swiss-Prot
Match: PSMD1_PONAB (26S proteasome non-ATPase regulatory subunit 1 OS=Pongo abelii GN=PSMD1 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.208e-41
Identity = 95/206 (46.12%), Postives = 137/206 (66.50%), Query Frame = 1
Query:  154 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQLAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAE-SNDEAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLG*L*ESITRSDNVHGTLSYWITSLIPLL-IERYRPEVRRPLRKV 765
            M++SA G++++L+E  P LK  AL  LN+ V+ FW EIS SV  IE LYEDE F    RQ AAL+ SKVFY+LG   +SL+YALGAG LF+V+++S+YV T++AK ID Y     + A+    E   +D RLE IV +M  +C+ D KY+QA+GIA+E RRL    ++I  S++V G L+Y +   + L+  +++R +V R L K+
Sbjct:    1 MITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQFAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPEGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYSLKLCMSLMQNKQFRNKVLRVLVKI 204          
BLAST of EY655523 vs. ExPASy Swiss-Prot
Match: PSMD1_MOUSE (26S proteasome non-ATPase regulatory subunit 1 OS=Mus musculus GN=Psmd1 PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.208e-41
Identity = 95/206 (46.12%), Postives = 137/206 (66.50%), Query Frame = 1
Query:  154 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQLAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAE-SNDEAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLG*L*ESITRSDNVHGTLSYWITSLIPLL-IERYRPEVRRPLRKV 765
            M++SA G++++L+E  P LK  AL  LN+ V+ FW EIS SV  IE LYEDE F    RQ AAL+ SKVFY+LG   +SL+YALGAG LF+V+++S+YV T++AK ID Y     + A+    E   +D RLE IV +M  +C+ D KY+QA+GIA+E RRL    ++I  S++V G L+Y +   + L+  +++R +V R L K+
Sbjct:    1 MITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQFAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPEGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYSLKLCMSLMQNKQFRNKVLRVLVKI 204          
BLAST of EY655523 vs. ExPASy Swiss-Prot
Match: PSMD1_HUMAN (26S proteasome non-ATPase regulatory subunit 1 OS=Homo sapiens GN=PSMD1 PE=1 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 2.208e-41
Identity = 95/206 (46.12%), Postives = 137/206 (66.50%), Query Frame = 1
Query:  154 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQLAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAE-SNDEAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLG*L*ESITRSDNVHGTLSYWITSLIPLL-IERYRPEVRRPLRKV 765
            M++SA G++++L+E  P LK  AL  LN+ V+ FW EIS SV  IE LYEDE F    RQ AAL+ SKVFY+LG   +SL+YALGAG LF+V+++S+YV T++AK ID Y     + A+    E   +D RLE IV +M  +C+ D KY+QA+GIA+E RRL    ++I  S++V G L+Y +   + L+  +++R +V R L K+
Sbjct:    1 MITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQFAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPEGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYSLKLCMSLMQNKQFRNKVLRVLVKI 204          
BLAST of EY655523 vs. ExPASy Swiss-Prot
Match: PSMD1_DICDI (26S proteasome non-ATPase regulatory subunit 1 OS=Dictyostelium discoideum GN=psmD1 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.694e-33
Identity = 78/180 (43.33%), Postives = 123/180 (68.33%), Query Frame = 1
Query:  157 VSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEI-STSVPIIESLYEDEEFDQHQRQLAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAESNDEAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLG*L*ESITRSDNVHGTLSY 693
            ++S    L++L+E    LK ++L  L+S VD+FW EI S+S+  I+SL  +++F +H+  LA+L++SKV+Y L +  +S+ YAL AGSLF+V   S+Y+ TLL K IDEY  +++    S ++   ++P LE+IV  M D+C  +G Y+QA+GIAIE RRL  + ++I++S NV+  LSY
Sbjct:    4 INSVSNYLSLLDEDQLELKSYSLEKLDSCVDEFWSEIASSSIDKIKSLSVNKQFPKHE--LASLVLSKVYYNLSDFPNSMEYALSAGSLFNVLSKSEYIETLLYKFIDEYIKLRT----STNKDTVINPHLESIVMGMFDRCFKEGSYKQALGIAIEARRLDIIEKAISQSGNVNSMLSY 177          
BLAST of EY655523 vs. ExPASy Swiss-Prot
Match: RPN2_SCHPO (26S proteasome regulatory subunit rpn2 OS=Schizosaccharomyces pombe GN=rpn2 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 7.118e-32
Identity = 81/210 (38.57%), Postives = 126/210 (60.00%), Query Frame = 1
Query:  151 TMVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQLAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAESNDEAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLG*L*ESITRSDNVHGTLSYWITSLIPLLIERYRPEVRRPLRKVIKASF 780
            ++++SAGGL+A+L+E    L++HAL  +  F+DQ WPEIS  V  IE +YED  F   +R+LAAL+VSKV+YYLGE +++L +AL +G  F   ++SDY  TL+ K ID +   KS     N +A  +D RL  +VE +  KC    +++  +GIAIE  RL  + E I  +D       Y +   + ++++    E R  L +++ +SF
Sbjct:   10 SIITSAGGLMALLDEQERELQVHALLKIYEFIDQLWPEISDDVTKIEVMYEDHSFP--ERELAALVVSKVYYYLGEYDEALLFALSSGPKFLHDKNSDYKETLIFKCIDMFIH-KSAELYKNPKADPLDERLSGVVEGIFQKCYAKNEWRHVLGIAIEAHRLD-IIEYILNADKETDLKPYVLELAMTVVLD---IEFRNRLLRLLLSSF 212          
BLAST of EY655523 vs. ExPASy Swiss-Prot
Match: RPN2_CANGA (26S proteasome regulatory subunit RPN2 OS=Candida glabrata GN=RPN2 PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.026e-31
Identity = 65/160 (40.62%), Postives = 103/160 (64.38%), Query Frame = 1
Query:  157 VSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQLAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAESNDEAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRL 636
            +++A  LLA+L E    +K +AL ++N  VDQFW E+S  +P IE+LY+D  F    R++AAL+ SKV+Y LGE   ++ YAL A   FD+ E + YV T+++K+I+ Y  + ++    + E  N+DP+L  + E+M+ KC    +Y+ A+GIA+E  RL
Sbjct:    3 LTTAAPLLALLKEKDAEVKAYALQSINEGVDQFWSEVSNDLPEIEALYDDNGFQD--RKMAALIASKVYYNLGEYESAVKYALAAEEKFDIDEKTQYVETIVSKSIEMYIKLATEIYNKSGEQVNLDPKLTIVFEKMMTKCTQANEYKLALGIALEAFRL 160          
BLAST of EY655523 vs. ExPASy Swiss-Prot
Match: RPN2_ASHGO (26S proteasome regulatory subunit RPN2 OS=Ashbya gossypii GN=RPN2 PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.026e-31
Identity = 72/160 (45.00%), Postives = 107/160 (66.88%), Query Frame = 1
Query:  157 VSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQLAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAESNDEAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRL 636
            V +A  LLA+L E   ++K +AL ++N  VDQ W E+S  +  IE+LYED +F+   R+LAAL+VSK++Y LGE   ++ YAL A   FD++E S YV T+++++I+ Y  IK        E + +D +L +I ERML+KCIT G+Y+ A+GIA+E  RL
Sbjct:    3 VITAAPLLALLREDDHTVKSYALHSINEVVDQLWSEVSNDITDIEALYEDSKFED--RKLAALVVSKIYYNLGEYESAVRYALAAEEYFDINEKSRYVETIVSQSIEMY--IKLATENYGKEKSEIDLQLVSIFERMLNKCITAGEYKLALGIALESYRL 158          
The following BLAST results are available for this feature:
BLAST of EY655523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
PSMD1_DROME1.997e-4244.7826S proteasome non-ATPase regulatory subunit 1 OS=... [more]
PSMD1_CHICK7.588e-4247.0926S proteasome non-ATPase regulatory subunit 1 OS=... [more]
PSMD1_RAT2.208e-4146.1226S proteasome non-ATPase regulatory subunit 1 OS=... [more]
PSMD1_PONAB2.208e-4146.1226S proteasome non-ATPase regulatory subunit 1 OS=... [more]
PSMD1_MOUSE2.208e-4146.1226S proteasome non-ATPase regulatory subunit 1 OS=... [more]
PSMD1_HUMAN2.208e-4146.1226S proteasome non-ATPase regulatory subunit 1 OS=... [more]
PSMD1_DICDI1.694e-3343.3326S proteasome non-ATPase regulatory subunit 1 OS=... [more]
RPN2_SCHPO7.118e-3238.5726S proteasome regulatory subunit rpn2 OS=Schizosa... [more]
RPN2_CANGA6.026e-3140.6326S proteasome regulatory subunit RPN2 OS=Candida ... [more]
RPN2_ASHGO6.026e-3145.0026S proteasome regulatory subunit RPN2 OS=Ashbya g... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-078-E02-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY655523 ID=EY655523; Name=EY655523; organism=Citrus sinensis; type=EST; length=859bp
CCACGCGTCCGCTCTTTCAGTGCTAGGGTTTGGAATTTCAATTCCGACGG
AACCCCAAGTTGAAATCTCCGATTTTTATTTCAATTGATTAGAACCGAAT
TGAAACCCCTAGGGTTTTCGCTTTAGATTACGGTTAAAAATATGGCGGCG
ACGATGGTGAGCTCGGCCGGTGGTTTACTGGCTATGTTGAACGAGAGTCA
TCCTTCGCTGAAACTGCACGCGCTTTCTAATCTCAATAGCTTTGTCGACC
AGTTCTGGCCGGAGATCTCGACTAGCGTCCCCATCATAGAAAGTTTGTAT
GAGGATGAAGAGTTTGATCAGCACCAGAGACAACTTGCTGCTCTTCTAGT
ATCAAAGGTCTTTTATTACTTGGGTGAACTTAATGATTCACTCTCATATG
CTCTTGGAGCTGGTTCCTTGTTTGATGTTTCAGAGGATTCTGATTATGTT
CATACACTGTTAGCTAAGGCTATCGATGAATATGCTAGTATTAAGTCGAA
GGCAGCTGAATCAAATGATGAAGCAGCAAATGTGGATCCTAGGTTGGAGG
CAATTGTGGAGAGAATGCTTGATAAGTGTATTACTGATGGAAAATACCAA
CAAGCAATGGGAATTGCGATTGAGTGCCGAAGATTGGGATAACTTTGAGA
AAGCATCACCAGGAGCGACAATGTGCATGGCACTTTGTCATATTGGATTA
CGTCTCTCATTCCTTTGTTAATCGAGAGATACCGGCCGGAGGTGCGTCGT
CCTCTTCGTAAAGTTATCAAAGCTTCCTTCTCAGATATTTGAACATTTGC
CAGGGCTCTGTTCTTGATGGACCAAGGGGTTGGAGCATCTAAAGAACTTC
TCCGTCGAA
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