EY655523
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY655523 vs. ExPASy Swiss-Prot
Match: PSMD1_DROME (26S proteasome non-ATPase regulatory subunit 1 OS=Drosophila melanogaster GN=Rpn2 PE=1 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.997e-42 Identity = 90/201 (44.78%), Postives = 138/201 (68.66%), Query Frame = 1 Query: 157 VSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQLAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAESNDEAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLG*L*ESITRSDNVHGTLSYWITSLIPLLIER-YRPEVRRPL 756 ++SA G++++L+E P LK+ AL L++ VD+FWPEIS S+ IE L+ED F +++ LA ++ SKVFY+LG D+L+YALGAG LFDV+ ++Y T++AK ID Y + + + E+ EA+ VD RLE IV RM+ +C+ D +++QA+GIA+E RR+ ++I +SD+V G L+Y + L+ R +R EV R L Sbjct: 3 LTSAAGIISLLDEPMPDLKVFALKKLDNIVDEFWPEISESIEKIEMLHEDRSFPENK--LAGMVASKVFYHLGSFEDALTYALGAGDLFDVNARNEYTETIIAKCIDFYIAQRVEFIENPKEASVVDERLEGIVNRMIQRCLDDNQFRQALGIALETRRMDTFKDAIMKSDDVRGMLAYAYNVTMSLIQNRGFRNEVLRCL 201
BLAST of EY655523 vs. ExPASy Swiss-Prot
Match: PSMD1_CHICK (26S proteasome non-ATPase regulatory subunit 1 OS=Gallus gallus GN=PSMD1 PE=2 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 7.588e-42 Identity = 97/206 (47.09%), Postives = 137/206 (66.50%), Query Frame = 1 Query: 154 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQLAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAE-SNDEAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLG*L*ESITRSDNVHGTLSYWITSLIPLL-IERYRPEVRRPLRKV 765 M++SA G++++L+E P LK AL LN+ V+ FW EIS SV IE LYEDE F RQ AAL+ SKVFY+LG +SL+YALGAG LF+V+++S+YV T++AK ID Y + AE E VD RLE IV +M +C+ D KY+QA+GIA+E RRL ++I S++V G L+Y + + L+ +++R +V R L K+ Sbjct: 1 MITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQFAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENAELPEGEKKPVDERLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDIFEKTILESNDVPGMLAYSLKLCMSLMQNKQFRNKVLRVLVKI 204
BLAST of EY655523 vs. ExPASy Swiss-Prot
Match: PSMD1_RAT (26S proteasome non-ATPase regulatory subunit 1 OS=Rattus norvegicus GN=Psmd1 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.208e-41 Identity = 95/206 (46.12%), Postives = 137/206 (66.50%), Query Frame = 1 Query: 154 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQLAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAE-SNDEAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLG*L*ESITRSDNVHGTLSYWITSLIPLL-IERYRPEVRRPLRKV 765 M++SA G++++L+E P LK AL LN+ V+ FW EIS SV IE LYEDE F RQ AAL+ SKVFY+LG +SL+YALGAG LF+V+++S+YV T++AK ID Y + A+ E +D RLE IV +M +C+ D KY+QA+GIA+E RRL ++I S++V G L+Y + + L+ +++R +V R L K+ Sbjct: 1 MITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQFAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPEGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYSLKLCMSLMQNKQFRNKVLRVLVKI 204
BLAST of EY655523 vs. ExPASy Swiss-Prot
Match: PSMD1_PONAB (26S proteasome non-ATPase regulatory subunit 1 OS=Pongo abelii GN=PSMD1 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.208e-41 Identity = 95/206 (46.12%), Postives = 137/206 (66.50%), Query Frame = 1 Query: 154 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQLAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAE-SNDEAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLG*L*ESITRSDNVHGTLSYWITSLIPLL-IERYRPEVRRPLRKV 765 M++SA G++++L+E P LK AL LN+ V+ FW EIS SV IE LYEDE F RQ AAL+ SKVFY+LG +SL+YALGAG LF+V+++S+YV T++AK ID Y + A+ E +D RLE IV +M +C+ D KY+QA+GIA+E RRL ++I S++V G L+Y + + L+ +++R +V R L K+ Sbjct: 1 MITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQFAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPEGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYSLKLCMSLMQNKQFRNKVLRVLVKI 204
BLAST of EY655523 vs. ExPASy Swiss-Prot
Match: PSMD1_MOUSE (26S proteasome non-ATPase regulatory subunit 1 OS=Mus musculus GN=Psmd1 PE=1 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.208e-41 Identity = 95/206 (46.12%), Postives = 137/206 (66.50%), Query Frame = 1 Query: 154 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQLAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAE-SNDEAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLG*L*ESITRSDNVHGTLSYWITSLIPLL-IERYRPEVRRPLRKV 765 M++SA G++++L+E P LK AL LN+ V+ FW EIS SV IE LYEDE F RQ AAL+ SKVFY+LG +SL+YALGAG LF+V+++S+YV T++AK ID Y + A+ E +D RLE IV +M +C+ D KY+QA+GIA+E RRL ++I S++V G L+Y + + L+ +++R +V R L K+ Sbjct: 1 MITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQFAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPEGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYSLKLCMSLMQNKQFRNKVLRVLVKI 204
BLAST of EY655523 vs. ExPASy Swiss-Prot
Match: PSMD1_HUMAN (26S proteasome non-ATPase regulatory subunit 1 OS=Homo sapiens GN=PSMD1 PE=1 SV=2) HSP 1 Score: 169.474 bits (428), Expect = 2.208e-41 Identity = 95/206 (46.12%), Postives = 137/206 (66.50%), Query Frame = 1 Query: 154 MVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQLAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAE-SNDEAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLG*L*ESITRSDNVHGTLSYWITSLIPLL-IERYRPEVRRPLRKV 765 M++SA G++++L+E P LK AL LN+ V+ FW EIS SV IE LYEDE F RQ AAL+ SKVFY+LG +SL+YALGAG LF+V+++S+YV T++AK ID Y + A+ E +D RLE IV +M +C+ D KY+QA+GIA+E RRL ++I S++V G L+Y + + L+ +++R +V R L K+ Sbjct: 1 MITSAAGIISLLDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGF--RSRQFAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPEGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYSLKLCMSLMQNKQFRNKVLRVLVKI 204
BLAST of EY655523 vs. ExPASy Swiss-Prot
Match: PSMD1_DICDI (26S proteasome non-ATPase regulatory subunit 1 OS=Dictyostelium discoideum GN=psmD1 PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.694e-33 Identity = 78/180 (43.33%), Postives = 123/180 (68.33%), Query Frame = 1 Query: 157 VSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEI-STSVPIIESLYEDEEFDQHQRQLAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAESNDEAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLG*L*ESITRSDNVHGTLSY 693 ++S L++L+E LK ++L L+S VD+FW EI S+S+ I+SL +++F +H+ LA+L++SKV+Y L + +S+ YAL AGSLF+V S+Y+ TLL K IDEY +++ S ++ ++P LE+IV M D+C +G Y+QA+GIAIE RRL + ++I++S NV+ LSY Sbjct: 4 INSVSNYLSLLDEDQLELKSYSLEKLDSCVDEFWSEIASSSIDKIKSLSVNKQFPKHE--LASLVLSKVYYNLSDFPNSMEYALSAGSLFNVLSKSEYIETLLYKFIDEYIKLRT----STNKDTVINPHLESIVMGMFDRCFKEGSYKQALGIAIEARRLDIIEKAISQSGNVNSMLSY 177
BLAST of EY655523 vs. ExPASy Swiss-Prot
Match: RPN2_SCHPO (26S proteasome regulatory subunit rpn2 OS=Schizosaccharomyces pombe GN=rpn2 PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 7.118e-32 Identity = 81/210 (38.57%), Postives = 126/210 (60.00%), Query Frame = 1 Query: 151 TMVSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQLAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAESNDEAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRLG*L*ESITRSDNVHGTLSYWITSLIPLLIERYRPEVRRPLRKVIKASF 780 ++++SAGGL+A+L+E L++HAL + F+DQ WPEIS V IE +YED F +R+LAAL+VSKV+YYLGE +++L +AL +G F ++SDY TL+ K ID + KS N +A +D RL +VE + KC +++ +GIAIE RL + E I +D Y + + ++++ E R L +++ +SF Sbjct: 10 SIITSAGGLMALLDEQERELQVHALLKIYEFIDQLWPEISDDVTKIEVMYEDHSFP--ERELAALVVSKVYYYLGEYDEALLFALSSGPKFLHDKNSDYKETLIFKCIDMFIH-KSAELYKNPKADPLDERLSGVVEGIFQKCYAKNEWRHVLGIAIEAHRLD-IIEYILNADKETDLKPYVLELAMTVVLD---IEFRNRLLRLLLSSF 212
BLAST of EY655523 vs. ExPASy Swiss-Prot
Match: RPN2_CANGA (26S proteasome regulatory subunit RPN2 OS=Candida glabrata GN=RPN2 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.026e-31 Identity = 65/160 (40.62%), Postives = 103/160 (64.38%), Query Frame = 1 Query: 157 VSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQLAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAESNDEAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRL 636 +++A LLA+L E +K +AL ++N VDQFW E+S +P IE+LY+D F R++AAL+ SKV+Y LGE ++ YAL A FD+ E + YV T+++K+I+ Y + ++ + E N+DP+L + E+M+ KC +Y+ A+GIA+E RL Sbjct: 3 LTTAAPLLALLKEKDAEVKAYALQSINEGVDQFWSEVSNDLPEIEALYDDNGFQD--RKMAALIASKVYYNLGEYESAVKYALAAEEKFDIDEKTQYVETIVSKSIEMYIKLATEIYNKSGEQVNLDPKLTIVFEKMMTKCTQANEYKLALGIALEAFRL 160
BLAST of EY655523 vs. ExPASy Swiss-Prot
Match: RPN2_ASHGO (26S proteasome regulatory subunit RPN2 OS=Ashbya gossypii GN=RPN2 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.026e-31 Identity = 72/160 (45.00%), Postives = 107/160 (66.88%), Query Frame = 1 Query: 157 VSSAGGLLAMLNESHPSLKLHALSNLNSFVDQFWPEISTSVPIIESLYEDEEFDQHQRQLAALLVSKVFYYLGELNDSLSYALGAGSLFDVSEDSDYVHTLLAKAIDEYASIKSKAAESNDEAANVDPRLEAIVERMLDKCITDGKYQQAMGIAIECRRL 636 V +A LLA+L E ++K +AL ++N VDQ W E+S + IE+LYED +F+ R+LAAL+VSK++Y LGE ++ YAL A FD++E S YV T+++++I+ Y IK E + +D +L +I ERML+KCIT G+Y+ A+GIA+E RL Sbjct: 3 VITAAPLLALLREDDHTVKSYALHSINEVVDQLWSEVSNDITDIEALYEDSKFED--RKLAALVVSKIYYNLGEYESAVRYALAAEEYFDINEKSRYVETIVSQSIEMY--IKLATENYGKEKSEIDLQLVSIFERMLNKCITAGEYKLALGIALESYRL 158 The following BLAST results are available for this feature:
BLAST of EY655523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >EY655523 ID=EY655523; Name=EY655523; organism=Citrus sinensis; type=EST; length=859bpback to top |