EY680624

Overview
NameEY680624
Unique NameEY680624
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length782
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680624 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1)

HSP 1 Score: 341.658 bits (875), Expect = 2.780e-93
Identity = 166/205 (80.98%), Postives = 182/205 (88.78%), Query Frame = 1
Query:   91 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTEPLYPVAAFIH-GFG*RTGSFADLKVKKSK 696
            F GKAV L+PS +E++  G+++MRKT SK+  VSSGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGEV +PLYP  +F   G      +FA+LKVK+ K
Sbjct:   13 FAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIK 217          
BLAST of EY680624 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1)

HSP 1 Score: 341.273 bits (874), Expect = 3.631e-93
Identity = 166/205 (80.98%), Postives = 182/205 (88.78%), Query Frame = 1
Query:   91 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTEPLYPVAAFIH-GFG*RTGSFADLKVKKSK 696
            F GKAV L+PS +E++  G+++MRKT SK+  VSSGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGEV +PLYP  +F   G      +FA+LKVK+ K
Sbjct:   12 FAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIK 216          
BLAST of EY680624 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1)

HSP 1 Score: 340.502 bits (872), Expect = 6.194e-93
Identity = 166/205 (80.98%), Postives = 181/205 (88.29%), Query Frame = 1
Query:   91 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTEPLYPVAAFIH-GFG*RTGSFADLKVKKSK 696
            F GKAV L+PS +E++  GR++MRKT +K+   SSGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV +PLYP  +F   G      +FA+LKVK+ K
Sbjct:   13 FAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIK 217          
BLAST of EY680624 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 1.380e-92
Identity = 165/203 (81.28%), Postives = 178/203 (87.68%), Query Frame = 1
Query:   91 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTEPLYPVAAFIH-GFG*RTGSFADLKVKKSK 696
            F G+AV L+PS +E+S  GRI+MRK  +KS  S SPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEV +PLYP  +F   G      +FA+LKVK+ K
Sbjct:   13 FAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIK 215          
BLAST of EY680624 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 1.380e-92
Identity = 163/203 (80.30%), Postives = 179/203 (88.18%), Query Frame = 1
Query:   91 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTEPLYPVAAFIH-GFG*RTGSFADLKVKKSK 696
            F G+AV L+PS  E++  GR+SMRKT +K V+S SPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR+AGGPLGEV +PLYP  +F   G      +FA+LKVK+ K
Sbjct:   13 FAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIK 215          
BLAST of EY680624 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1)

HSP 1 Score: 337.421 bits (864), Expect = 5.243e-92
Identity = 164/205 (80.00%), Postives = 181/205 (88.29%), Query Frame = 1
Query:   91 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTEPLYPVAAFIH-GFG*RTGSFADLKVKKSK 696
            F GKAV L+PS +E++  G+++MRKT +K+  +SSGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGEV +PLYP  +F   G      +FA+LKVK  K
Sbjct:   13 FAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKHIK 217          
BLAST of EY680624 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 337.421 bits (864), Expect = 5.243e-92
Identity = 163/201 (81.09%), Postives = 178/201 (88.56%), Query Frame = 1
Query:   97 GKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTEPLYPVAAFIH-GFG*RTGSFADLKVKKSK 696
            G+AV L+P+  E+    + +MRKT SKSVSSGSPWYG DRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYRIAGGPLGEVT+P+YP  +F   G      +FA+LKVK+ K
Sbjct:    5 GQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELK 205          
BLAST of EY680624 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1)

HSP 1 Score: 337.035 bits (863), Expect = 6.848e-92
Identity = 164/205 (80.00%), Postives = 181/205 (88.29%), Query Frame = 1
Query:   91 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTEPLYPVAAFIH-GFG*RTGSFADLKVKKSK 696
            F GKAV L+PS +E++  G+++MRKT +K+  VSSGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AG PLGEV +PLYP  +F   G      +FA+LKVK+ K
Sbjct:   12 FAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIK 216          
BLAST of EY680624 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 1.168e-91
Identity = 164/205 (80.00%), Postives = 180/205 (87.80%), Query Frame = 1
Query:   91 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTEPLYPVAAFIH-GFG*RTGSFADLKVKKSK 696
            F G AV L+PS +E++  G+  MRKT +K+  VSSGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGA+EGYR+AGGPLGEVT+PLYP  +F   G      +FA+LKVK+ K
Sbjct:   13 FAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIK 217          
BLAST of EY680624 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 9.889e-91
Identity = 163/205 (79.51%), Postives = 179/205 (87.32%), Query Frame = 1
Query:   91 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGLDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTEPLYPVAAFIH-GFG*RTGSFADLKVKKSK 696
            F GKAV  +PS +E++  G+ +MRKT +K+  VSSGSPWYG DRVKYLGPFSGE PSYLTGEFPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMGAVEGYR+AGGPLGEV +PLYP  +F   G      +FA+LKVK+ K
Sbjct:   13 FAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIK 217          
The following BLAST results are available for this feature:
BLAST of EY680624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
CB24_TOBAC2.780e-9380.98Chlorophyll a-b binding protein 40, chloroplastic ... [more]
CB21_TOBAC3.631e-9380.98Chlorophyll a-b binding protein 16, chloroplastic ... [more]
CB2G_SOLLC6.194e-9380.98Chlorophyll a-b binding protein 3C, chloroplastic ... [more]
CB2B_SOLLC1.380e-9281.28Chlorophyll a-b binding protein 1B, chloroplastic ... [more]
CB22_TOBAC1.380e-9280.30Chlorophyll a-b binding protein 21, chloroplastic ... [more]
CB25_TOBAC5.243e-9280.00Chlorophyll a-b binding protein 50, chloroplastic ... [more]
CB21_CUCSA5.243e-9281.09Chlorophyll a-b binding protein of LHCII type I, c... [more]
CB25_NICPL6.848e-9280.00Chlorophyll a-b binding protein E, chloroplastic O... [more]
CB27_TOBAC1.168e-9180.00Chlorophyll a-b binding protein 7, chloroplastic O... [more]
CB25_PETSP9.889e-9179.51Chlorophyll a-b binding protein 91R, chloroplastic... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-013-B02-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680624 ID=EY680624; Name=EY680624; organism=Citrus sinensis; type=EST; length=782bp
CTTGCTTACACAGCTTCTCTTGCTTACCCAGCTTCTGCTTCTCAATTAAA
TTCCTCAATGGCAACCTCAACAATGGCTCTCTCCTCATCATTCGTCGGCA
AGGCCGTGAACCTCGCCCCTTCAGGCAATGAGCTAAGCAATGGTGGCCGC
ATCTCCATGCGTAAAACCGGGAGCAAGTCTGTTTCTTCAGGTAGCCCGTG
GTACGGCCTAGACAGAGTCAAGTACTTGGGCCCATTCTCTGGCGAGCCCC
CAAGCTACTTGACCGGTGAGTTCCCTGGCGACTACGGTTGGGACACAGCC
GGGCTTTCAGCTGACCCAGAAACCTTTGCCAAGAACCGTGAACTCGAAGT
CATCCACTGCAGATGGGCCATGTTGGGAGCTCTTGGATGCGTCTTCCCGG
AGCTCTTGGCCCGCAACGGAGTCAAGTTCGGTGAGGCCGTATGGTTCAAG
GCGGGGGCCCAGATCTTCAGCGAGGGCGGGCTTGACTACTTGGGGAACCC
AAGCCTGATCCACGCCCAGAGCATCTTGGCCATCTGGGCTTGCCAGGTGG
TCTTGATGGGAGCCGTTGAGGGTTACAGAATTGCTGGAGGGCCGCTCGGT
GAAGTGACTGAACCCTTGTACCCAGTGGCAGCTTTTATCCATGGGTTTGG
GTGAAGAACCGGAAGTTTTGCTGACCTCAAGGTAAAGAAATCAAAAATGG
AAGTTGGGTATGGTCTCCATGTTTGGTTTTTTCCTTCAGGGCATTGTCCC
CGGGAAGGGAACCTTAAAAAAATTGGGCCAAC
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