EY680345

Overview
NameEY680345
Unique NameEY680345
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length802
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY680345 vs. ExPASy Swiss-Prot
Match: SYP61_ARATH (Syntaxin-61 OS=Arabidopsis thaliana GN=SYP61 PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.190e-63
Identity = 100/158 (63.29%), Postives = 121/158 (76.58%), Query Frame = 2 
Query:   56 MSSAQDPFYIVKEEIQDSINKLQSTFHQWENSASDPGEQVHLKKELLAGCESIEWQVDELDKAIGVASRDPSWYGIDDIELEKRRRWTSTARTQVSSMKKAVLSGGANGVGTMSAGGMRRELMRLPNSHQAKSNQYAAAQDNDDFIQSESDRTIASCK 529
            MSSAQDPFYIVKEEIQDSI+KLQSTFH+WE  + D G+Q H+ KEL+A C SIEWQVDEL+KAI VA++DPSWYGID+ ELEKRRRWTS ARTQV ++K  VL+G  +  G   A  +RRELMR+PNS +A        +D+D F+QSESDR +   K
Sbjct:    1 MSSAQDPFYIVKEEIQDSIDKLQSTFHKWERISPDMGDQAHVAKELVATCGSIEWQVDELEKAITVAAKDPSWYGIDEAELEKRRRWTSNARTQVRNVKSGVLAGKVSS-GAGHASEVRRELMRMPNSGEASRYDQYGGRDDDGFVQSESDRQMLLIK 157

HSP 2 Score: 65.0846 bits (157), Expect = 1.190e-63
Identity = 33/48 (68.75%), Postives = 37/48 (77.08%), Query Frame = 3 
Query:  513 QLLLVKQQDEELDELIASVHRIGGVGLTTHEELVTPGNIKNELGTERD 656
            Q+LL+KQQDEELDEL  SV RIGGVGLT H+ELV    I +EL TE D
Sbjct:  152 QMLLIKQQDEELDELSKSVQRIGGVGLTIHDELVAQERIIDELDTEMD 199
The following BLAST results are available for this feature:
BLAST of EY680345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SYP61_ARATH1.190e-6363.29Syntaxin-61 OS=Arabidopsis thaliana GN=SYP61 PE=1 ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-010-A12-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680345 ID=EY680345; Name=EY680345; organism=Citrus sinensis; type=EST; length=802bp
CTGAGACGAGCAATCTCGTCATCGCCACCTCCTTTTCCGGACACCGGATT
AAATTATGTCTTCTGCTCAAGATCCATTCTATATCGTTAAAGAAGAGATT
CAAGATTCTATTAATAAGTTGCAATCTACTTTCCATCAATGGGAAAATAG
TGCTTCTGATCCCGGGGAGCAAGTACATTTGAAGAAGGAACTACTCGCCG
GTTGTGAGAGCATTGAGTGGCAGGTAGATGAATTGGACAAAGCAATTGGT
GTGGCAAGCAGAGATCCTTCTTGGTATGGTATTGATGACATTGAACTTGA
AAAACGAAGGAGATGGACCAGCACTGCTCGTACTCAGGTCAGCAGCATGA
AGAAAGCTGTATTATCTGGGGGTGCGAATGGTGTTGGGACTATGAGTGCA
GGTGGAATGCGTCGGGAATTAATGAGGCTTCCAAATTCTCATCAGGCTAA
ATCAAACCAGTACGCTGCGGCCCAAGATAATGATGATTTTATCCAGTCAG
AATCTGATAGAACAATTGCTTCTTGTAAAGCAACAGGATGAGGAGTTGGA
TGAACTTATTGCAAGCGTGCACAGAATTGGAGGGGTTGGGCTTACCACAC
ATGAAGAACTCGTAACACCAGGAAACATTAAAAATGAACTTGGGACGGAA
AGGGACCGCCCATCCTAACCTCCTTGATTTTGTTTCAAAAAAAAGGGCTA
AGGGCCATGAAAAAAGGCACCCCCCAGGGGGCAAAATTAGAAGAATTATA
TTTTGGAATGGCCCCGGGTACACCATTAAATTTGGGCGGGGTCCCCCCCA
AA
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