EY680059

Overview
NameEY680059
Unique NameEY680059
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680059 vs. ExPASy Swiss-Prot
Match: GPAT6_ARATH (Glycerol-3-phosphate acyltransferase 6 OS=Arabidopsis thaliana GN=GPAT6 PE=1 SV=1)

HSP 1 Score: 341.273 bits (874), Expect = 4.339e-93
Identity = 167/202 (82.67%), Postives = 185/202 (91.58%), Query Frame = 2
Query:    2 IFHEGRLVQRPTPLVALLTFLWMPIGIILSILRVYTNIPLPERLAWYNYKLLGIKVIVKGTPPPAPKNGQSGVLFICNHRTVLDPVVTAVALGRKISCVTYSISKFTEIISPIKAVALSREREKDAAHIKQLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSVFHGTTVRGHKFGWIPYYVFMNPRAT 607
            IFHEGRLVQRPTPLVALLTFLW+P+G +LSI+RVYTNIPLPER+A YNYKL GIK++V G PPP PK GQ G L +CNHRTVLDPVVTAVALGRKISCVTYSISKF+E+ISPIKAVAL+R+REKDAA+IK+LLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQS+F+GTT RG+K    PY+ FMNPR T
Sbjct:  235 IFHEGRLVQRPTPLVALLTFLWLPVGFVLSIIRVYTNIPLPERIARYNYKLTGIKLVVNGHPPPPPKPGQPGHLLVCNHRTVLDPVVTAVALGRKISCVTYSISKFSELISPIKAVALTRQREKDAANIKRLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSMFNGTTTRGYKL-LDPYFAFMNPRPT 435          
BLAST of EY680059 vs. ExPASy Swiss-Prot
Match: GPAT4_ARATH (Glycerol-3-phosphate acyltransferase 4 OS=Arabidopsis thaliana GN=GPAT4 PE=1 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 3.702e-76
Identity = 131/200 (65.50%), Postives = 166/200 (83.00%), Query Frame = 2
Query:    2 IFHEGRLVQRPTPLVALLTFLWMPIGIILSILRVYTNIPLPERLAWYNYKLLGIKVIVKGTPPPAPKNGQSGVLFICNHRTVLDPVVTAVALGRKISCVTYSISKFTEIISPIKAVALSREREKDAAHIKQLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSVFHGTTVRGHKFGWIPYYVFMNPR 601
            IFH+GRLVQRPTPL AL+ +LW+P G +LS+ RVY N+PLPER   Y Y++LGI + ++G  PP P  G+ G L++ NHRT LDP++ A+ALGRKI+CVTYS+S+ + ++SPI AVAL+R+R  DAA ++QLLE+GDLVICPEGTTCREP+LLRFSALFAEL+DRIVPVA+N KQ +F+GTTVRG KF W PY+ FMNPR
Sbjct:  233 IFHDGRLVQRPTPLNALIIYLWLPFGFMLSVFRVYFNLPLPERFVRYTYEILGIHLTIRGHRPPPPSPGKPGNLYVLNHRTALDPIIIAIALGRKITCVTYSVSRLSLMLSPIPAVALTRDRVADAARMRQLLEKGDLVICPEGTTCREPYLLRFSALFAELSDRIVPVAMNCKQGMFNGTTVRGVKF-WDPYFFFMNPR 431          

HSP 2 Score: 25.7942 bits (55), Expect = 3.702e-76
Identity = 13/33 (39.39%), Postives = 18/33 (54.55%), Query Frame = 1
Query:  661 GGKSALEFANYISRGLGGYFRVLRGPHLTKKKK 759
            GGK+  E ANY+ + +GG         LT+K K
Sbjct:  451 GGKTPFEVANYVQKVIGGVLG-FECTELTRKDK 482          
BLAST of EY680059 vs. ExPASy Swiss-Prot
Match: GPAT8_ARATH (Probable glycerol-3-phosphate acyltransferase 8 OS=Arabidopsis thaliana GN=GPAT8 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.170e-74
Identity = 129/200 (64.50%), Postives = 165/200 (82.50%), Query Frame = 2
Query:    2 IFHEGRLVQRPTPLVALLTFLWMPIGIILSILRVYTNIPLPERLAWYNYKLLGIKVIVKGTPPPAPKNGQSGVLFICNHRTVLDPVVTAVALGRKISCVTYSISKFTEIISPIKAVALSREREKDAAHIKQLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSVFHGTTVRGHKFGWIPYYVFMNPR 601
            +FH+GRL QRPTPL A++T+LW+P G ILSI+RVY N+PLPER   Y Y++LGI + ++G  PP P  G  G L++ NHRT LDP++ A+ALGRKI CVTYS+S+ + ++SPI AVAL+R+R  DAA++++LLE+GDLVICPEGTTCRE +LLRFSALFAEL+DRIVPVA+N KQ +F+GTTVRG KF W PY+ FMNPR
Sbjct:  232 VFHDGRLAQRPTPLNAIITYLWLPFGFILSIIRVYFNLPLPERFVRYTYEMLGIHLTIRGHRPPPPSPGTLGNLYVLNHRTALDPIIVAIALGRKICCVTYSVSRLSLMLSPIPAVALTRDRATDAANMRKLLEKGDLVICPEGTTCREEYLLRFSALFAELSDRIVPVAMNCKQGMFNGTTVRGVKF-WDPYFFFMNPR 430          

HSP 2 Score: 24.2534 bits (51), Expect = 1.170e-74
Identity = 12/33 (36.36%), Postives = 18/33 (54.55%), Query Frame = 1
Query:  661 GGKSALEFANYISRGLGGYFRVLRGPHLTKKKK 759
            GGK+ +E ANY+ + +G          LT+K K
Sbjct:  450 GGKTPIEVANYVQKVIGAVLG-FECTELTRKDK 481          
BLAST of EY680059 vs. ExPASy Swiss-Prot
Match: GPAT5_ARATH (Glycerol-3-phosphate acyltransferase 5 OS=Arabidopsis thaliana GN=GPAT5 PE=1 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 9.428e-64
Identity = 121/200 (60.50%), Postives = 148/200 (74.00%), Query Frame = 2
Query:    2 IFHEGRLVQRPTPLVALLTFLWMPIGIILSILRVYTNIPLPERLAWYNYKLLGIKVIVKGTPPPAPKNGQSGVLFICNHRTVLDPVVTAVALGRKISCVTYSISKFTEIISPIKAVALSREREKDAAHIKQLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSVFHGTTVRGHKFGWIPYYVFMNPR 601
            IFH+GRLV+RPTP  AL+  LW+P GIIL+++R++    LP     Y  ++ G  +IVKG PP  P  G+SGVLF+C HRT++DPVV +  LGR I  VTYSIS+ +EI+SPI  V L+R R+ DAA IKQ L +GDLV+CPEGTTCREPFLLRFSALFAELTDRIVPVA+N +   FH TT RG K G  P + FMNPR
Sbjct:  222 IFHDGRLVKRPTPATALIILLWIPFGIILAVIRIFLGAVLPLWATPYVSQIFGGHIIVKGKPPQPPAAGKSGVLFVCTHRTLMDPVVLSYVLGRSIPAVTYSISRLSEILSPIPTVRLTRIRDVDAAKIKQQLSKGDLVVCPEGTTCREPFLLRFSALFAELTDRIVPVAMNYRVGFFHATTARGWK-GLDPIFFFMNPR 420          
BLAST of EY680059 vs. ExPASy Swiss-Prot
Match: GPAT7_ARATH (Glycerol-3-phosphate acyltransferase 7 OS=Arabidopsis thaliana GN=GPAT7 PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.837e-57
Identity = 112/200 (56.00%), Postives = 138/200 (69.00%), Query Frame = 2
Query:    2 IFHEGRLVQRPTPLVALLTFLWMPIGIILSILRVYTNIPLPERLAWYNYKLLGIKVIVKGTPPPAPKNGQSGVLFICNHRTVLDPVVTAVALGRKISCVTYSISKFTEIISPIKAVALSREREKDAAHIKQLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSVFHGTTVRGHKFGWIPYYVFMNPR 601
            IFH+GRLV+ PTP  AL+  LW+P GIIL+++R++    LP     Y  ++   + IVKG PP     G  GVLF+C HRT++DPVV +  LGR I  VTYSIS+ +EI+SPI    L+R R+ DA  IK+ L  GDLV+ PEGTTCREPFLLRFSALFAELTD IVPVA+N +   FH TT RG K G  P + FMNPR
Sbjct:  220 IFHDGRLVKLPTPATALIILLWIPFGIILAMIRIFVGFLLPLWAIPYVSRIFNTRFIVKGKPPAQATTGNPGVLFVCTHRTLMDPVVLSYVLGRSIPAVTYSISRLSEILSPIPTFRLTRIRDVDAEMIKKELSNGDLVVYPEGTTCREPFLLRFSALFAELTDNIVPVAMNYRVGFFHATTARGWK-GLDPIFFFMNPR 418          
BLAST of EY680059 vs. ExPASy Swiss-Prot
Match: GPAT1_ARATH (Glycerol-3-phosphate acyltransferase 1 OS=Arabidopsis thaliana GN=GPAT1 PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.996e-54
Identity = 101/202 (50.00%), Postives = 143/202 (70.79%), Query Frame = 2
Query:    2 IFHEGRLVQRPTPLVALLTFLWMPIGIILSILRVYTNIPLPERLAWYNYKLLGIKVIVK--GTPPPAPKNGQSGVLFICNHRTVLDPVVTAVALGRKISCVTYSISKFTEIISPIKAVALSREREKDAAHIKQLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSVFHGTTVRGHKFGWIPYYVFMNPR 601
            IFH+GRL   PTPL  L  F+W+PIG +L++ R+   + LP  +A +   + G+++  K        P+ G SGVL++CNHRT+LDPV    +LG+ ++ VTYS+SKF+E I+P+K V+L R+R+KD   +++LL +GDLV+CPEGTTCREP+LLRFS LFAELT+ IVPVA++ + S+F+GTT  G K    P +  MNPR
Sbjct:  323 IFHDGRLAFLPTPLATLAMFIWLPIGFLLAVFRISVGVFLPYHVANFLASMSGVRITFKTHNLNNGRPEKGNSGVLYVCNHRTLLDPVFLTTSLGKPLTAVTYSLSKFSEFIAPLKTVSLKRDRKKDGEAMQRLLSKGDLVVCPEGTTCREPYLLRFSPLFAELTEDIVPVAVDARVSMFYGTTASGLKC-LDPIFFLMNPR 523          

HSP 2 Score: 22.3274 bits (46), Expect = 4.996e-54
Identity = 15/41 (36.59%), Postives = 22/41 (53.66%), Query Frame = 1
Query:  643 RNLNMKGGKSALEFANYISRGLGGYFRVL--RGPHLTKKKK 759
            + +   GGKS+ E AN+I    G   RVL     +LT++ K
Sbjct:  536 KEMTCAGGKSSFEVANFIQ---GELARVLGFECTNLTRRDK 573          
BLAST of EY680059 vs. ExPASy Swiss-Prot
Match: GPAT2_ARATH (Probable glycerol-3-phosphate acyltransferase 2 OS=Arabidopsis thaliana GN=GPAT2 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.414e-43
Identity = 90/202 (44.55%), Postives = 134/202 (66.34%), Query Frame = 2
Query:    2 IFHEGRLVQRPTPLVALLTFLWMPIGIILSILRVYTNIPLPERLA--WYNYKLLGIKVIVKGTPPPAPKNGQSGVLFICNHRTVLDPVVTAVALGRK-ISCVTYSISKFTEIISPIKAVALSREREKDAAHIKQLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSVFHGTTVRGHKFGWIPYYVFMNP 598
            IFH+GRL  +PTPL  L+ F+W P   +L+  R+   + LP  LA  +  +  + + + V         + + G LF+CNHRT+LDP+  + AL +K +  VTYS+S+ +E+++PIK V L+R+R KD   +++LL +GDLV+CPEGTTCREP+LLRFS LF+E+ D IVPVAI++  + F+GTT  G K  + P +  +NP
Sbjct:  259 IFHDGRLAVKPTPLNTLVLFMWAPFAAVLAAARLVFGLNLPYSLANPFLAFSGIHLTLTVNNHNDLISADRKRGCLFVCNHRTLLDPLYISYALRKKNMKAVTYSLSRLSELLAPIKTVRLTRDRVKDGQAMEKLLSQGDLVVCPEGTTCREPYLLRFSPLFSEVCDVIVPVAIDSHVTFFYGTTASGLK-AFDPIFFLLNP 459          
BLAST of EY680059 vs. ExPASy Swiss-Prot
Match: GPAT3_ARATH (Probable glycerol-3-phosphate acyltransferase 3 OS=Arabidopsis thaliana GN=GPAT3 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 8.587e-41
Identity = 90/206 (43.69%), Postives = 129/206 (62.62%), Query Frame = 2
Query:    2 IFHEGRLVQRPTPLVALLTFLWMPIGIILSILRVYTNIPLPERLAWYNYKLLGIKVIVKGTPPPAPKNGQS---GVLFICNHRTVLDPVVTAVALGRK-ISCVTYSISKFTEIISPIKAVALSREREKDAAHIKQLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSVFHGTTVRGHKFGWIPYYVFMNPRAT 607
            IFH+GRL  +PT +  L+ F+W P     +  R++ ++ +P  L+       G ++ V      + K   S   G LF+CNHRT+LDP+  A AL +K I  VTYS+S+ +EI++PIK V L+R+R  D   +++LL EGDLV+CPEGTTCREP+LLRFS LF E++D IVPVA+    + F+GTT  G K    P +  ++P  T
Sbjct:  253 IFHDGRLAIKPTLMNTLVLFMWGPFAAAAAAARLFVSLCIPYSLSIPILAFSGCRLTVTNDYVSSQKQKPSQRKGCLFVCNHRTLLDPLYVAFALRKKNIKTVTYSLSRVSEILAPIKTVRLTRDRVSDGQAMEKLLTEGDLVVCPEGTTCREPYLLRFSPLFTEVSDVIVPVAVTVHVTFFYGTTASGLK-ALDPLFFLLDPYPT 457          
The following BLAST results are available for this feature:
BLAST of EY680059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
GPAT6_ARATH4.339e-9382.67Glycerol-3-phosphate acyltransferase 6 OS=Arabidop... [more]
GPAT4_ARATH3.702e-7665.50Glycerol-3-phosphate acyltransferase 4 OS=Arabidop... [more]
GPAT8_ARATH1.170e-7464.50Probable glycerol-3-phosphate acyltransferase 8 OS... [more]
GPAT5_ARATH9.428e-6460.50Glycerol-3-phosphate acyltransferase 5 OS=Arabidop... [more]
GPAT7_ARATH3.837e-5756.00Glycerol-3-phosphate acyltransferase 7 OS=Arabidop... [more]
GPAT1_ARATH4.996e-5450.00Glycerol-3-phosphate acyltransferase 1 OS=Arabidop... [more]
GPAT2_ARATH2.414e-4344.55Probable glycerol-3-phosphate acyltransferase 2 OS... [more]
GPAT3_ARATH8.587e-4143.69Probable glycerol-3-phosphate acyltransferase 3 OS... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-650-007-A02-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680059 ID=EY680059; Name=EY680059; organism=Citrus sinensis; type=EST; length=872bp
GATATTTCACGAGGGTCGTTTAGTTCAAAGACCAACTCCACTTGTTGCTC
TTCTGACCTTCCTTTGGATGCCAATTGGTATCATATTATCAATTCTCAGA
GTCTATACAAATATCCCTTTGCCGGAACGATTGGCTTGGTACAATTACAA
GCTTTTGGGCATCAAGGTTATCGTTAAGGGTACCCCACCACCAGCACCCA
AAAATGGCCAAAGTGGTGTCCTTTTTATATGCAACCATCGCACTGTTTTA
GACCCTGTGGTCACAGCCGTTGCCCTAGGACGAAAAATTAGTTGTGTCAC
ATATAGTATTAGCAAGTTCACTGAAATAATTTCACCCATTAAAGCTGTTG
CCTTGTCAAGGGAAAGAGAGAAAGATGCAGCTCACATCAAGCAATTGCTT
GAAGAAGGTGACTTGGTGATCTGCCCCGAGGGAACAACCTGCAGGGAGCC
TTTTCTTTTACGATTCAGTGCACTGTTTGCTGAGCTTACCGATAGAATTG
TGCCGGTTGCTATCAACACTAAGCAAAGTGTGTTTCATGGAACCACAGTA
CGTGGGCACAAATTTGGTTGGATCCCTTACTATGTGTTCATGAATCCCAG
GGCAACTTTATGAAGATTCCATTCTTGAATCAGCCTGGCCGCCGGAACCT
GAACATGAAAGGGGGCAAATCAGCCCTCGAATTTGCTAATTACATTTCAA
GGGGGCTTGGCGGGTACTTTAGGGTTTTGAGGGGCCCACATTTGACGAAG
AAAAAAAAAATACCCCCTTTCCCTCCAGGGCAAGGAAGGGCCCCCCTCCC
ACTCCAAAAAAAGGAAAAAGGGCAAAAGGGAAAAAGGCTTTAAAATCCCC
CAAAAAGCGGGAAATTTGGACA
back to top