EY680337

Overview
NameEY680337
Unique NameEY680337
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680337 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.489e-23
Identity = 65/146 (44.52%), Postives = 81/146 (55.48%), Query Frame = 2
Query:  266 GCFPCFGSSNNKETXXXXXXXXXXXXKELNRKDSAKDGSIAQSHHV--NRVSS-----DKSKSRNGSDPKKEPAIPKEPTAHIAAQTFTFRELAAATKNFRPECLLGEGGFGRVYKARLESTGQVVAVQQLGREWPSRNREFRGEI 682
            GCF CF SS++++               LN  D +  G   QS     N +S      +K  S+     K+E  +P++    IAA TF FRELAAAT NF P+  LGEGGFGRVYK RL+STGQVVAV+QL R     NREF  E+
Sbjct:    2 GCFSCFDSSDDEK---------------LNPVDESNHGQKKQSQPTVSNNISGLPSGGEKLSSKTNGGSKRELLLPRDGLGQIAAHTFAFRELAAATMNFHPDTFLGEGGFGRVYKGRLDSTGQVVAVKQLDRNGLQGNREFLVEV 132          
BLAST of EY680337 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.485e-14
Identity = 58/161 (36.02%), Postives = 76/161 (47.20%), Query Frame = 2
Query:  266 GCFPCFGSSN-----NKETXXXXXXXXXXXXKELNRKDSAKDGSIAQSHHVN---RVSSDKSKSRNGSDPKKEPAIPKEPTAHI--------------AAQTFTFRELAAATKNFRPECLLGEGGFGRVYKARLESTGQVVAVQQLGREWPSRNREFRGEI 682
            GCF C   S+     NK+T              +NRK      S+A+S   +   + SSD +K     D   E  + KE    +               AQTFTF+ELA AT NFR +C LGEGGFG+V+K  +E   QVVA++QL R      REF  E+
Sbjct:    2 GCFGCSKKSSKRSETNKDTV-------------INRKIVGGTTSVAKSDKRDDQTQPSSDSTKVSPYRDVNNEGGVGKEDQLSLDVKGLNLNDQVTGKKAQTFTFQELAEATGNFRSDCFLGEGGFGKVFKGTIEKLDQVVAIKQLDRNGVQGIREFVVEV 149          
The following BLAST results are available for this feature:
BLAST of EY680337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PBS1_ARATH4.489e-2344.52Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
RLCK7_ARATH8.485e-1436.02Probable serine/threonine-protein kinase RLCKVII O... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-010-A04-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680337 ID=EY680337; Name=EY680337; organism=Citrus sinensis; type=EST; length=845bp
CACCACACCCCGAACCAAAACACAGTTTTTTTCGATTTGTTGATCTGCTT
CTTTCTTGGTCTCGATCTTTGTCTTGAATGGACACTCAAGATCGTAGAAG
GATAAGATTTTGGGGGCAAAGGTTGATCTGATGAGCAGTTTGTGAGATGG
GGTTTTCAGTATTTTTGAAGTAAAAAAATGGTGATGAGTTGAGTTGAGTG
AGAAGGATTTTGTTTTATATTAAAGTTTGAATTTTTATTGAAGATTTAAT
TGATTTGATATGGGCGGGTGTTTTCCTTGTTTTGGATCATCCAATAACAA
GGAGACTGGTGGCGGCGGCGGCGGTGGCGCCGTTGGTGCTGTTAAGGAAC
TGAACAGGAAGGATTCAGCTAAAGACGGCTCAATTGCTCAGTCTCACCAT
GTCAATAGAGTTAGTTCAGATAAATCTAAATCTCGGAATGGTTCTGACCC
AAAGAAGGAACCAGCTATTCCAAAAGAACCAACTGCACATATTGCCGCCC
AAACGTTTACATTTCGGGAGCTTGCTGCTGCCACCAAGAACTTTAGACCA
GAATGTCTTTTGGGTGAAGGAGGTTTCGGACGTGTTTACAAGGCCCGCTT
GGAGAGCACAGGACAAGTAGTAGCTGTCCAACAGCTTGGACGGGAATGGC
CTTCCAGGAACCGGGAGTTTCGGGGTGAAATTTCTCTTGCTTAATCCTCT
TACCCCACTTCAAACCTGGGTCATTTTGATTGGGTTATTGGGGCAAAAGG
GGAACCCACCCCCTCCCTTGGTTTAGAATTTTTTGGCCCGTTGGGATTCT
TTGGAAAAAACTTTTTAACTGGATTTTCCCCCCCCCAAAAAAGGA
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