EY680336

Overview
NameEY680336
Unique NameEY680336
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length841
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680336 vs. ExPASy Swiss-Prot
Match: PSAL_CUCSA (Photosystem I reaction center subunit XI, chloroplastic OS=Cucumis sativus GN=PSAL PE=2 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 4.242e-82
Identity = 151/218 (69.27%), Postives = 175/218 (80.28%), Query Frame = 1
Query:    4 MASVSSPMASQLKSSFTSPVSRSLLTPRGISGSPFRVVPSKRSPRFLVKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWGYFLPYVLNLPYSVK 657
            MA+ +SP ASQL SSF S  +R+L++P+G+S SP R +P+ R+  F ++AIQ++KPT+QVIQPINGDPFIGSLETP+TSSPLIAWYLSNLPAYRTAVSPLLRG+EVGLAHGF LVGPFVKAGPLRNT              +VILS+CLT+YG+ASF+EGEPSTAP LTLTGRKK PD LQTADGWAK         ISGVIW YFL YVL+LPY VK
Sbjct:    1 MATATSPTASQLSSSFASSNTRALISPKGLSASPLRRIPT-RTHSFTIRAIQADKPTFQVIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKAGPLRNTAYAGGAGSLAAGGLIVILSVCLTMYGVASFNEGEPSTAPSLTLTGRKKTPDPLQTADGWAKFSGGFFFGGISGVIWAYFLLYVLDLPYYVK 217          
BLAST of EY680336 vs. ExPASy Swiss-Prot
Match: PSAL_ARATH (Photosystem I reaction center subunit XI, chloroplastic OS=Arabidopsis thaliana GN=PSAL PE=1 SV=2)

HSP 1 Score: 302.368 bits (773), Expect = 2.105e-81
Identity = 153/219 (69.86%), Postives = 174/219 (79.45%), Query Frame = 1
Query:    4 MASVSSPMASQLKSSFTSP-VSRSLLTPRGISGSPFRVVPSKRSPRFLVKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWGYFLPYVLNLPYSVK 657
            MA+ +SPMASQL+SSF+S  +S+ L  P+GISG+PF V P+KR   F V+A++S+K T+QV+QPINGDPFIGSLETP+TSSPLIAWYLSNLP YRTAV+PLLRGVEVGLAHGF LVGPFVKAGPLRNT              VVILS+CLTIYGI+SF EGEPS AP LTLTGRKK+PDQLQTADGWAK         ISGV W YFL YVL+LPY VK
Sbjct:    1 MAASASPMASQLRSSFSSASLSQRLAVPKGISGAPFGVSPTKRVSSFTVRAVKSDKTTFQVVQPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFVKAGPLRNTAYAGSAGSLAAAGLVVILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQPDQLQTADGWAKFTGGFFFGGISGVTWAYFLLYVLDLPYFVK 219          
BLAST of EY680336 vs. ExPASy Swiss-Prot
Match: PSAL_SPIOL (Photosystem I reaction center subunit XI, chloroplastic OS=Spinacia oleracea GN=PSAL PE=1 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 5.733e-79
Identity = 151/219 (68.95%), Postives = 171/219 (78.08%), Query Frame = 1
Query:    4 MASVSSPMASQLKSSFTSPVSRSLLTPRGISGSPFRVVPS-KRSPRFLVKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWGYFLPYVLNLPYSVK 657
            MA+ +SPMASQLKS FT+   ++L+ P+GISG   R  PS +R   F V+AI++EKPTYQVIQP+NGDPFIG LETP+TSSPLIAWYLSNLPAYRTAV+PLLRGVEVGLAHGFLLVGPFVKAGPLRNTE             VVILS+CLT+YGIASF EGEPS AP LTLTGRKK+PDQLQ+ADGWAK         +SGV W  FL YVL+LPY  K
Sbjct:    1 MAATTSPMASQLKSGFTT---KALVVPKGISGPALRGFPSPRRHTSFTVRAIKTEKPTYQVIQPLNGDPFIGGLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEYAGAAGSLAAAGLVVILSMCLTMYGIASFKEGEPSIAPALTLTGRKKQPDQLQSADGWAKFTGGFFFGGVSGVTWACFLMYVLDLPYYFK 216          
BLAST of EY680336 vs. ExPASy Swiss-Prot
Match: PSAL_HORVU (Photosystem I reaction center subunit XI, chloroplastic OS=Hordeum vulgare GN=PSAL PE=1 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.672e-70
Identity = 133/212 (62.74%), Postives = 158/212 (74.53%), Query Frame = 1
Query:   22 PMASQLKSSFTSPVSRSLLTPRGISGSPFRVVPSKRSPRFLVKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWGYFLPYVLNLPYSVK 657
            PMASQ+  S       +   PRG+SG+        R PRF+VKA++S+KPTYQV+QPINGDPFIGSLETP+TSSPL+AWYLSNLPAYRTAVSPLLRG+EVGLAHG+LLVGPF   GPLRNT +            V ILS+CLT+YG+ASF+EGEPSTAP LTLTGRKKE D+LQTA+GW++         +SG +W YFL YVL+LPY  K
Sbjct:    8 PMASQVMKS-----GLACSKPRGMSGASLT-----RRPRFVVKAVKSDKPTYQVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPVHGQAGTLGAIGLVSILSVCLTMYGVASFNEGEPSTAPVLTLTGRKKEADKLQTAEGWSQFTGGFFFGGVSGAVWAYFLLYVLDLPYFFK 209          
BLAST of EY680336 vs. ExPASy Swiss-Prot
Match: PSAL_GUITH (Photosystem I reaction center subunit XI OS=Guillardia theta GN=psaL PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.026e-27
Identity = 61/149 (40.94%), Postives = 84/149 (56.38%), Query Frame = 1
Query:  178 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWGYFL 624
            Q ++P N DPF+G+L TPIT+S      LSNLPAYR  +SPLLRG+E+G+ HG+ LVGPF K GPLRN+E+            ++I++ CL IYG+ SF+  +                +QLQ+A GW +         I G  + Y L
Sbjct:    3 QFVKPYNDDPFVGNLATPITTSSFTRTLLSNLPAYRAGLSPLLRGLEIGMTHGYFLVGPFYKLGPLRNSEVALLAGVFSALGLIIIMAACLAIYGVVSFNTNDGG--------------EQLQSAKGWRQFTSGWLVGSIGGASFAYIL 137          
BLAST of EY680336 vs. ExPASy Swiss-Prot
Match: PSAL_CYACA (Photosystem I reaction center subunit XI OS=Cyanidium caldarium GN=psaL PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.899e-27
Identity = 58/147 (39.46%), Postives = 83/147 (56.46%), Query Frame = 1
Query:  184 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWGYFL 624
            I+P   +PF+G+L TP+ SS +  WYL NLP YR  +SPLLRG+E+G+AHG+ ++GPF K GPLRNT++            ++I SI + IYGI +F   E +              D+LQTA+GW +         + G  + Y L
Sbjct:    5 IKPYGSNPFVGNLSTPVNSSKVTIWYLKNLPIYRRGLSPLLRGLEIGMAHGYFIIGPFYKLGPLRNTDLSLLSGLIAAIGLIIISSIAMIIYGIVTFDNSENN--------------DKLQTANGWRQLASGFLLGAVGGAGFAYIL 137          
BLAST of EY680336 vs. ExPASy Swiss-Prot
Match: PSAL_THEEB (Photosystem I reaction center subunit XI OS=Thermosynechococcus elongatus (strain BP-1) GN=psaL PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.301e-26
Identity = 54/149 (36.24%), Postives = 88/149 (59.06%), Query Frame = 1
Query:  178 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWGYFL 624
            ++++P NGDPF+G L TPI+ S L+  ++ NLPAYR  +SP+LRG+EVG+AHG+ L+GP+VK GPLR++++            +++ + CL  YG+ SF +G  S+             D L+T++GW++         +      +FL
Sbjct:    4 ELVKPYNGDPFVGHLSTPISDSGLVKTFIGNLPAYRQGLSPILRGLEVGMAHGYFLIGPWVKLGPLRDSDVANLGGLISGIALILVATACLAAYGLVSFQKGGSSS-------------DPLKTSEGWSQFTAGFFVGAMGSAFVAFFL 139          
BLAST of EY680336 vs. ExPASy Swiss-Prot
Match: PSAL_PORPU (Photosystem I reaction center subunit XI OS=Porphyra purpurea GN=psaL PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.631e-26
Identity = 60/156 (38.46%), Postives = 87/156 (55.77%), Query Frame = 1
Query:  178 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWGYFLPYVLNLP 645
            + I+P N DPF+G+L TP+++S      L NLPAYR  +SPLLRG+E+G+AHG+ L+GPF K GPLR T++            ++IL+ CL++YG  SF+              R    D LQTA+GW +         + G  + Y L  + N+P
Sbjct:    3 EFIKPYNDDPFVGNLSTPVSTSSFSKGLLGNLPAYRRGLSPLLRGLEIGMAHGYFLIGPFDKLGPLRGTDVALLAGFLSSVGLIIILTTCLSMYGNVSFT--------------RSDSKDPLQTAEGWGQFTAGFLVGAVGGSGFAYLL--LANIP 142          
BLAST of EY680336 vs. ExPASy Swiss-Prot
Match: PSAL_GRATL (Photosystem I reaction center subunit XI OS=Gracilaria tenuistipitata var. liui GN=psaL PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.631e-26
Identity = 60/154 (38.96%), Postives = 87/154 (56.49%), Query Frame = 1
Query:  184 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWGYFLPYVLNLP 645
            IQ  N DPF+G+L TP+++S      L+NLPAYR  +SPLLRG+E+G+AHG+ LVGPF K GPLRNT++            ++IL++CL++YG  SF + +                D LQT +GW +         + G  + Y L  + N+P
Sbjct:    5 IQSYNNDPFLGNLSTPVSTSTFTKGLLNNLPAYRRGLSPLLRGLEIGMAHGYFLVGPFDKLGPLRNTDVALLSGFLSAVGLIIILTVCLSMYGNVSFDKDDAK--------------DLLQTTEGWGQFTAGFLVGAVGGSGFAYLL--LANIP 142          
BLAST of EY680336 vs. ExPASy Swiss-Prot
Match: PSAL_ODOSI (Photosystem I reaction center subunit XI OS=Odontella sinensis GN=psaL PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.254e-25
Identity = 58/126 (46.03%), Postives = 80/126 (63.49%), Query Frame = 1
Query:  184 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFSEGEPSTAPGLTLTGRKKEPDQLQTADGW 561
            I+P N DPF+G L TPITSS +    L NLPAYR  ++PLLRG+E+GLAHG+ L+GPFVK GPLRN++I            ++IL++ LTIYG+A+F +G+ +           +  + LQT   W
Sbjct:    5 IKPYNDDPFVGHLATPITSSSITRAILKNLPAYRFGLTPLLRGLEIGLAHGYFLMGPFVKLGPLRNSDIALFSGFLSTIGLILILTLGLTIYGVAAFGQGQTT-----------ENSNDLQTKKAW 119          
The following BLAST results are available for this feature:
BLAST of EY680336 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
PSAL_CUCSA4.242e-8269.27Photosystem I reaction center subunit XI, chloropl... [more]
PSAL_ARATH2.105e-8169.86Photosystem I reaction center subunit XI, chloropl... [more]
PSAL_SPIOL5.733e-7968.95Photosystem I reaction center subunit XI, chloropl... [more]
PSAL_HORVU1.672e-7062.74Photosystem I reaction center subunit XI, chloropl... [more]
PSAL_GUITH1.026e-2740.94Photosystem I reaction center subunit XI OS=Guilla... [more]
PSAL_CYACA3.899e-2739.46Photosystem I reaction center subunit XI OS=Cyanid... [more]
PSAL_THEEB3.301e-2636.24Photosystem I reaction center subunit XI OS=Thermo... [more]
PSAL_PORPU5.631e-2638.46Photosystem I reaction center subunit XI OS=Porphy... [more]
PSAL_GRATL5.631e-2638.96Photosystem I reaction center subunit XI OS=Gracil... [more]
PSAL_ODOSI1.254e-2546.03Photosystem I reaction center subunit XI OS=Odonte... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-650-010-A03-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680336 ID=EY680336; Name=EY680336; organism=Citrus sinensis; type=EST; length=841bp
CAAATGGCTTCTGTTTCTTCTCCAATGGCCAGCCAGCTCAAGAGTAGCTT
TACTTCACCAGTTTCCAGGAGCCTGCTTACTCCAAGGGGTATCTCTGGAT
CTCCATTCAGGGTTGTTCCCTCCAAGAGAAGCCCTCGTTTCCTTGTCAAA
GCTATCCAATCTGAAAAGCCAACTTACCAAGTTATTCAGCCAATCAATGG
TGATCCATTCATTGGAAGCTTGGAGACTCCAATTACATCAAGTCCATTGA
TTGCATGGTACCTCTCAAATCTACCAGCTTATCGGACGGCAGTCAGCCCA
CTACTGAGAGGAGTAGAGGTGGGGTTGGCCCATGGATTCCTCCTTGTGGG
TCCATTTGTTAAGGCAGGGCCATTGAGAAACACAGAAATAGCAGGACCAG
CAGGGTCATTGGCAGCTGGTGGCCTTGTTGTGATCCTCAGCATTTGCTTG
ACAATCTATGGAATTGCTTCATTCAGTGAAGGAGAGCCATCCACTGCTCC
AGGCTTAACATTGACCGGAAGGAAGAAGGAGCCTGATCAGTTGCAAACAG
CTGATGGGTGGGCTAAGTTCACTGGAGGATTCTTCTTTGGTGGAATTTCT
GGTGTCATTTGGGGCTATTTCCTGCCTTACGTTCTAAACCTTCCCTACTC
CGTTAAATAAAATATGTAACATCAACTCTTTGGTTTTAAAATCCCATGTA
TCTCATTTTGCTACTCCTGAAAATCCAACCGGTTGGGAATGTTTATTGGA
AATGAAACTTGGCTTCCGTTTCCGGAACCCTAAAAAAAAAAAAAAAAGGG
GGGCCCCCTCTAAAAGGAACCAAGGTTTAATTAACCCTTGG
back to top