EY678858

Overview
NameEY678858
Unique NameEY678858
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY678858 vs. ExPASy Swiss-Prot
Match: UBIQ_WHEAT (Ubiquitin OS=Triticum aestivum PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.178e-30
Identity = 68/76 (89.47%), Postives = 70/76 (92.11%), Query Frame = 3 
Query:  129 MQIFVKTLTGKTIPLEVESSDTIDNV*ANIQEKEGIPPDQQRLIFDGKQLEDRRTLADYNINKEATLHLVLRLRGG 356
            MQIFVKTLTGKTI LEVESSDTIDNV A IQ+KEGIPPDQQRLIF GKQLED RTLADYNI KE+TLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY678858 vs. ExPASy Swiss-Prot
Match: UBIQ_SOYBN (Ubiquitin OS=Glycine max GN=SUBI-1 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.178e-30
Identity = 68/76 (89.47%), Postives = 70/76 (92.11%), Query Frame = 3 
Query:  129 MQIFVKTLTGKTIPLEVESSDTIDNV*ANIQEKEGIPPDQQRLIFDGKQLEDRRTLADYNINKEATLHLVLRLRGG 356
            MQIFVKTLTGKTI LEVESSDTIDNV A IQ+KEGIPPDQQRLIF GKQLED RTLADYNI KE+TLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY678858 vs. ExPASy Swiss-Prot
Match: UBIQ_SOLTU (Ubiquitin OS=Solanum tuberosum GN=UBI3 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.178e-30
Identity = 68/76 (89.47%), Postives = 70/76 (92.11%), Query Frame = 3 
Query:  129 MQIFVKTLTGKTIPLEVESSDTIDNV*ANIQEKEGIPPDQQRLIFDGKQLEDRRTLADYNINKEATLHLVLRLRGG 356
            MQIFVKTLTGKTI LEVESSDTIDNV A IQ+KEGIPPDQQRLIF GKQLED RTLADYNI KE+TLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY678858 vs. ExPASy Swiss-Prot
Match: UBIQ_SOLLC (Ubiquitin OS=Solanum lycopersicum GN=UBI3 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.178e-30
Identity = 68/76 (89.47%), Postives = 70/76 (92.11%), Query Frame = 3 
Query:  129 MQIFVKTLTGKTIPLEVESSDTIDNV*ANIQEKEGIPPDQQRLIFDGKQLEDRRTLADYNINKEATLHLVLRLRGG 356
            MQIFVKTLTGKTI LEVESSDTIDNV A IQ+KEGIPPDQQRLIF GKQLED RTLADYNI KE+TLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY678858 vs. ExPASy Swiss-Prot
Match: UBIQ_PETCR (Ubiquitin OS=Petroselinum crispum GN=PCUBI4-1 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.178e-30
Identity = 68/76 (89.47%), Postives = 70/76 (92.11%), Query Frame = 3 
Query:  129 MQIFVKTLTGKTIPLEVESSDTIDNV*ANIQEKEGIPPDQQRLIFDGKQLEDRRTLADYNINKEATLHLVLRLRGG 356
            MQIFVKTLTGKTI LEVESSDTIDNV A IQ+KEGIPPDQQRLIF GKQLED RTLADYNI KE+TLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY678858 vs. ExPASy Swiss-Prot
Match: UBIQ_PEA (Ubiquitin OS=Pisum sativum GN=PU1 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.178e-30
Identity = 68/76 (89.47%), Postives = 70/76 (92.11%), Query Frame = 3 
Query:  129 MQIFVKTLTGKTIPLEVESSDTIDNV*ANIQEKEGIPPDQQRLIFDGKQLEDRRTLADYNINKEATLHLVLRLRGG 356
            MQIFVKTLTGKTI LEVESSDTIDNV A IQ+KEGIPPDQQRLIF GKQLED RTLADYNI KE+TLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY678858 vs. ExPASy Swiss-Prot
Match: UBIQ_ORYSJ (Ubiquitin OS=Oryza sativa subsp. japonica GN=UBQ1 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.178e-30
Identity = 68/76 (89.47%), Postives = 70/76 (92.11%), Query Frame = 3 
Query:  129 MQIFVKTLTGKTIPLEVESSDTIDNV*ANIQEKEGIPPDQQRLIFDGKQLEDRRTLADYNINKEATLHLVLRLRGG 356
            MQIFVKTLTGKTI LEVESSDTIDNV A IQ+KEGIPPDQQRLIF GKQLED RTLADYNI KE+TLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY678858 vs. ExPASy Swiss-Prot
Match: UBIQ_NICSY (Ubiquitin OS=Nicotiana sylvestris GN=UBICEP52-7 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.178e-30
Identity = 68/76 (89.47%), Postives = 70/76 (92.11%), Query Frame = 3 
Query:  129 MQIFVKTLTGKTIPLEVESSDTIDNV*ANIQEKEGIPPDQQRLIFDGKQLEDRRTLADYNINKEATLHLVLRLRGG 356
            MQIFVKTLTGKTI LEVESSDTIDNV A IQ+KEGIPPDQQRLIF GKQLED RTLADYNI KE+TLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY678858 vs. ExPASy Swiss-Prot
Match: UBIQ_MAIZE (Ubiquitin OS=Zea mays GN=UBF9 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.178e-30
Identity = 68/76 (89.47%), Postives = 70/76 (92.11%), Query Frame = 3 
Query:  129 MQIFVKTLTGKTIPLEVESSDTIDNV*ANIQEKEGIPPDQQRLIFDGKQLEDRRTLADYNINKEATLHLVLRLRGG 356
            MQIFVKTLTGKTI LEVESSDTIDNV A IQ+KEGIPPDQQRLIF GKQLED RTLADYNI KE+TLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of EY678858 vs. ExPASy Swiss-Prot
Match: UBIQ_LUPPO (Ubiquitin OS=Lupinus polyphyllus PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.178e-30
Identity = 68/76 (89.47%), Postives = 70/76 (92.11%), Query Frame = 3 
Query:  129 MQIFVKTLTGKTIPLEVESSDTIDNV*ANIQEKEGIPPDQQRLIFDGKQLEDRRTLADYNINKEATLHLVLRLRGG 356
            MQIFVKTLTGKTI LEVESSDTIDNV A IQ+KEGIPPDQQRLIF GKQLED RTLADYNI KE+TLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76
The following BLAST results are available for this feature:
BLAST of EY678858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
UBIQ_WHEAT2.178e-3089.47Ubiquitin OS=Triticum aestivum PE=3 SV=1[more]
UBIQ_SOYBN2.178e-3089.47Ubiquitin OS=Glycine max GN=SUBI-1 PE=3 SV=1[more]
UBIQ_SOLTU2.178e-3089.47Ubiquitin OS=Solanum tuberosum GN=UBI3 PE=3 SV=1[more]
UBIQ_SOLLC2.178e-3089.47Ubiquitin OS=Solanum lycopersicum GN=UBI3 PE=3 SV=... [more]
UBIQ_PETCR2.178e-3089.47Ubiquitin OS=Petroselinum crispum GN=PCUBI4-1 PE=3... [more]
UBIQ_PEA2.178e-3089.47Ubiquitin OS=Pisum sativum GN=PU1 PE=3 SV=1[more]
UBIQ_ORYSJ2.178e-3089.47Ubiquitin OS=Oryza sativa subsp. japonica GN=UBQ1 ... [more]
UBIQ_NICSY2.178e-3089.47Ubiquitin OS=Nicotiana sylvestris GN=UBICEP52-7 PE... [more]
UBIQ_MAIZE2.178e-3089.47Ubiquitin OS=Zea mays GN=UBF9 PE=3 SV=1[more]
UBIQ_LUPPO2.178e-3089.47Ubiquitin OS=Lupinus polyphyllus PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-030-B12-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY678858 ID=EY678858; Name=EY678858; organism=Citrus sinensis; type=EST; length=832bp
CGGAGGTCCAGACCGGATTCCCGGGTCGACCCCCCTTTCCGGATTATATT
AAGCCAGTACCCCTTTTAAAGAAAGAACAAAAAACATACTTAGTTTAGAT
ACCCCTGATCCCCGTCTCAGCCTTCCACATGCAGATCTTTGTGAAAACTT
TGACCGGCAAGACCATCCCTCTCGAGGTGGAGAGCTCCGACACGATCGAC
AACGTCTAGGCTAATATCCAGGAAAAGGAAGGGATTCCACCGGACCAGCA
GCGGCTGATCTTCGACGGAAAGCAACTCGAGGACCGGCGCACCTTGGCAG
ATTACAACATCAATAAGGAAGCGACTCTCCACCTCGTCCTCCGTCTCCGC
GGCGGCATGTAGATTTTCGTCACGACTCTGACCGGGAAAACGATCACCCT
GGAGGTGGAGACCTCCCACACAAATCAACGACGTGAAAGCGAATATCTAG
GACAAGGAAAGGAATCCCCCCGAACCAGCTAAAGCGCATTCTTCGCCGGC
CAGTCTCTGGAGGAAGGCCGCACCCGGGTCGAATAGAGGGAGCACAGAGG
AACCATGCCTCCGTCTGTGTGTAGAAACAGGACAAGAAGAAAGGCAAGAA
AAACCTAAACGAAATTAACTCGAGAAAAAGAAAAATCCTGGAACGGGGGA
AGGATTCCACAGATAACACATAATGTGAAAATGGATGGATATCATAGAAA
CCGGGGGGTCTATGCGTAAACAGCAAGAAACACCCACTTCCGTACGATCA
GGCAAACCAAGGATAGTGAGTATTCATATCGAGAGATAACTAAGCGATAG
AGAGAACGGTTTGAGAAACATATGAACAGGAC
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