EY680417

Overview
NameEY680417
Unique NameEY680417
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length858
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680417 vs. ExPASy Swiss-Prot
Match: P2C76_ARATH (Probable protein phosphatase 2C 76 OS=Arabidopsis thaliana GN=At5g53140 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.862e-32
Identity = 75/141 (53.19%), Postives = 97/141 (68.79%), Query Frame = 3
Query:  312 MLCNSYIRTVIVRV-VNIGSFTRTRLELSNINKSLHAGLR-----VGY--TWNREFRKSSKMMVDSAA--KRGPIVDVLPEKEDDGGYVSGGWKSEDGKLRCGYSSFRGKRATMEDFYDIKTSNGDGAAVWMFGVFDGHGG 704
            M+C+S+IR+ IV+    IG   + R +  +I K+L  G       +G+  T    FR S+KMMVD++A  KR  +VD+ PEK DDGGY+ GGWK++DG L CGY SFRGKR+TMEDFYDIK S  +G AV MFG+FDGHGG
Sbjct:    1 MVCSSFIRSFIVQAGCRIGVLAQGRHQFIHIKKTLSVGFGFRTSVIGFRTTSGIGFRTSAKMMVDTSAGEKRISLVDMPPEKVDDGGYIGGGWKNDDGSLSCGYCSFRGKRSTMEDFYDIKASTIEGQAVCMFGIFDGHGG 141          
BLAST of EY680417 vs. ExPASy Swiss-Prot
Match: P2C52_ORYSJ (Probable protein phosphatase 2C 52 OS=Oryza sativa subsp. japonica GN=Os05g0587100 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 9.426e-23
Identity = 43/61 (70.49%), Postives = 51/61 (83.61%), Query Frame = 3
Query:  522 EKEDDGGYVSGGWKSEDGKLRCGYSSFRGKRATMEDFYDIKTSNGDGAAVWMFGVFDGHGG 704
            E+ D+ GY+SGGWKSEDG L CGYSSFRGKRA+MEDFYDIK+S  D   + +FG+FDGHGG
Sbjct:  209 ERVDEVGYMSGGWKSEDGFLSCGYSSFRGKRASMEDFYDIKSSKIDDKQISLFGIFDGHGG 269          

HSP 2 Score: 30.4166 bits (67), Expect = 9.426e-23
Identity = 19/36 (52.78%), Postives = 22/36 (61.11%), Query Frame = 1
Query:  694 GMGGSRAAEYLKGHLL*KSPGASPIL*QNPKWAINE 801
            G GGSRAAEYLK HL  ++    P    N K AI+E
Sbjct:  266 GHGGSRAAEYLKEHLF-ENLMKHPEFMTNTKLAISE 300          
BLAST of EY680417 vs. ExPASy Swiss-Prot
Match: P2C13_ORYSJ (Probable protein phosphatase 2C 13 OS=Oryza sativa subsp. japonica GN=Os02g0255100 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.132e-21
Identity = 52/103 (50.49%), Postives = 66/103 (64.08%), Query Frame = 3
Query:  432 GYTWNREFRKSSKMMVDSAAKRGPIVDVLPEKEDDG------------GYVSGGWKSEDGKLRCGYSSFRGKRATMEDFYDIKTSNGDGAAVWMFGVFDGHGG 704
            G++  R  R +++MM+DS+        + P++   G            GY SGGW  EDGKL+CGYSSFRGKRATMEDFYD+K +  DG AV +FGVFDGHGG
Sbjct:   49 GHSGWRGLRVAARMMLDSSDSAAAAGQMQPQQRAAGAVACSAQDGGAAGYASGGWAREDGKLKCGYSSFRGKRATMEDFYDVKLTEIDGQAVSLFGVFDGHGG 151          
BLAST of EY680417 vs. ExPASy Swiss-Prot
Match: P2C07_ORYSJ (Probable protein phosphatase 2C 7 OS=Oryza sativa subsp. japonica GN=Os01g0618200 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 4.279e-19
Identity = 36/61 (59.02%), Postives = 49/61 (80.33%), Query Frame = 3
Query:  522 EKEDDGGYVSGGWKSEDGKLRCGYSSFRGKRATMEDFYDIKTSNGDGAAVWMFGVFDGHGG 704
            +++D+  Y+ GGW S+DG++ CGYSSFRG+RA MEDFYDIK+S  D   + +FG+FDGHGG
Sbjct:   95 DEDDEARYICGGWTSDDGRMSCGYSSFRGRRANMEDFYDIKSSKVDDNQINLFGIFDGHGG 155          

HSP 2 Score: 25.409 bits (54), Expect = 4.279e-19
Identity = 11/15 (73.33%), Postives = 12/15 (80.00%), Query Frame = 1
Query:  694 GMGGSRAAEYLKGHL 738
            G GGS AAE+LK HL
Sbjct:  152 GHGGSHAAEHLKKHL 166          
BLAST of EY680417 vs. ExPASy Swiss-Prot
Match: P2C45_ORYSJ (Probable protein phosphatase 2C 45 OS=Oryza sativa subsp. japonica GN=Os04g0659500 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.062e-11
Identity = 35/69 (50.72%), Postives = 46/69 (66.67%), Query Frame = 3
Query:  498 GPIVDVLPEKEDDGGYVSGGWKSEDGKLRCGYSSFRGKRATMEDFYDIKTSNGDGAAVWMFGVFDGHGG 704
            G +  V+P    DG  VSGG  S++GK   GY+S  GKRA+MEDFY+ +  + DG  + +FGVFDGHGG
Sbjct:    2 GYLSSVIPT---DGSPVSGGGLSQNGKFSYGYASSPGKRASMEDFYETRIDSVDGQIIGLFGVFDGHGG 67          
BLAST of EY680417 vs. ExPASy Swiss-Prot
Match: P2C10_ORYSJ (Probable protein phosphatase 2C 10 OS=Oryza sativa subsp. japonica GN=Os02g0149800 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.273e-11
Identity = 34/67 (50.75%), Postives = 44/67 (65.67%), Query Frame = 3
Query:  522 EKEDDGGY------VSGGWKSEDGKLRCGYSSFRGKRATMEDFYDIKTSNGDGAAVWMFGVFDGHGG 704
            E E++ G+      VSGG  SE+GK   GY+S  GKRA+MEDFY+ +    DG  + +FGVFDGHGG
Sbjct:   56 ELEEEMGFAGDCSPVSGGGLSENGKFSYGYASAPGKRASMEDFYETRIDGVDGETIGLFGVFDGHGG 122          
The following BLAST results are available for this feature:
BLAST of EY680417 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
P2C76_ARATH1.862e-3253.19Probable protein phosphatase 2C 76 OS=Arabidopsis ... [more]
P2C52_ORYSJ9.426e-2370.49Probable protein phosphatase 2C 52 OS=Oryza sativa... [more]
P2C13_ORYSJ1.132e-2150.49Probable protein phosphatase 2C 13 OS=Oryza sativa... [more]
P2C07_ORYSJ4.279e-1959.02Probable protein phosphatase 2C 7 OS=Oryza sativa ... [more]
P2C45_ORYSJ1.062e-1150.72Probable protein phosphatase 2C 45 OS=Oryza sativa... [more]
P2C10_ORYSJ5.273e-1150.75Probable protein phosphatase 2C 10 OS=Oryza sativa... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-010-H03-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680417 ID=EY680417; Name=EY680417; organism=Citrus sinensis; type=EST; length=858bp
CCACGCGTCCGGATTCTTTCTCTATCGCTCCAGAGAGAGAAAGAAATTGC
AACACCAACATCTACTCACCTGCTTCCACGTGTCCCATCATCCGACCCGA
AACCGATCACCACCCCGCTCCCCCTCCGATCCGATCCGCCTTCCAAACTA
GATCTGTAATTTGCTTTGAATATTCTGGTCCCCATTTCAAAAAAAAAAGA
AGCAATCTTTATTTCAAAAAGCTTCATTTTATGACTCCAATAGTTTAAAA
AAATTGTTGTGTTATTGTGGGGTTGGTGATCTGGCATTGAAGGCCGGAGT
GAATAATTTAGATGTTATGCAACAGTTATATAAGGACTGTGATTGTGCGA
GTTGTGAATATTGGATCGTTTACGAGAACGAGGCTGGAATTAAGCAACAT
AAACAAGAGTTTGCATGCGGGTCTTCGTGTAGGCTATACTTGGAATCGAG
AATTTAGAAAGAGCTCCAAGATGATGGTTGATTCGGCAGCGAAGCGGGGA
CCCATTGTCGATGTATTACCCGAGAAAGAGGATGACGGTGGTTATGTCAG
CGGAGGGTGGAAAAGTGAAGATGGAAAACTGAGATGTGGATACTCAAGTT
TTAGGGGAAAGAGGGCAACTATGGAGGATTTCTATGACATTAAAACTTCC
AATGGTGATGGGGCAGCTGTCTGGATGTTTGGAGTCTTTGATGGGCATGG
GGGGTTCCCGTGCCGCTGAATATTTGAAGGGACACCTCCTTTGAAAATCC
CCTGGAGCCTCCCCCATTTTATGACAAAACCCCAAATGGGCTATAAATGA
AAAAAATCCAACAAACGGAGGGCCACTTTTTTGGGAATCTGAAAAAAAAA
ACTTCAGG
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