FC922182

Overview
NameFC922182
Unique NameFC922182
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length771
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC922182 vs. ExPASy Swiss-Prot
Match: M810_ARATH (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.449e-11
Identity = 43/110 (39.09%), Postives = 60/110 (54.55%), Query Frame = 1 
Query:  442 H*SHAYLSHKKYIRDLLTKVNMLDCKGVITPMSSGQDSKLQKTVKGEMGYYIEDATH*RSIVSGLQYLILTRLEIAYSIHKLSQYVSTPTLQHLMAYKRVLRYLKETQYY 771
            H S  +LS  KY   +L    MLDCK + TP+    +S +  T K        D +  RSIV  LQYL LTR +I+Y+++ + Q +  PTL      KRVLRY+K T ++
Sbjct:   50 HPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLNSSVS-TAK------YPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFH 152
The following BLAST results are available for this feature:
BLAST of FC922182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
M810_ARATH4.449e-1139.09Uncharacterized mitochondrial protein AtMg00810 OS... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAM1DH12RM1 SLH Citrus sinensis cDNA clone KN0AAM1DH12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC922182 ID=FC922182; Name=FC922182; organism=Citrus sinensis; type=EST; length=771bp
GTCATGGTTGTTGCAGAAGTGTATGGTTGAGTAATTACCACTATGATGAT
GACTGCAATTTTTGGAAAAATAAATGTGACAAATAAATAACAGAAAATAT
GATAAAATATTTTAGGTGGCTCGGCGTAAACCCTACGTCCACGGACCAAG
ATTGCAAAATAATTTTACTAACGAATGAAAATTTATAATATTGGTAAAAA
CTCTCAAAATGTAAAATCCCAAGACACCCAAATGGAACCTCACTAGAATA
CTCCAGTAAAAGCTCTCAAATCTCTCACATTGTTTCACTTGAAATTACTC
ACAATTCTCACGATTTTGGGACACCTTACTCGTTTGAGATGAATCTCAAT
TTATAGTGTATGTGTAGCCTTGAGTTTCAACAAGACAAGCCACTATCCTT
GAAATTTGCCATCAGCGTTGAGCTGGAACTTGCATTGCATACATTAAAGT
CATGCATACTTGTCTCACAAGAAGTATATTAGGGATTTGCTTACTAAAGT
GAATATGCTTGACTGTAAAGGAGTAATAACACCAATGAGCAGTGGCCAGG
ACTCAAAATTACAGAAGACAGTTAAAGGAGAGATGGGTTATTACATTGAA
GATGCCACTCACTGAAGAAGTATAGTAAGTGGTCTCCAATACTTAATTTT
GACAAGACTAGAAATTGCTTACTCTATTCATAAGCTGAGTCAATATGTTT
CTACGCCAACACTTCAACATCTTATGGCCTACAAGAGGGTTCTTAGATAT
CTAAAGGAGACACAATATTAT
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