EY680141

Overview
NameEY680141
Unique NameEY680141
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11074 contig Csv1_Contig11074:1233..1772. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY680141 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSJ (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. japonica GN=CSLH2 PE=2 SV=3)

HSP 1 Score: 123.635 bits (309), Expect = 5.782e-28
Identity = 64/169 (37.87%), Postives = 93/169 (55.03%), Query Frame = 2
Query:    2 YKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSSDVDE---------VMFDDSPFFVPGTTIILVHLAAWATGLLRLQSQCAHG----SGLGDYFCSVYVVLCFFPFLRGL-FMTGKKGIPWSTIGKSTALALLFVQWCK 466
            Y  Y  +EY+  GLS R+WW N+ M RI++ SAW    +   L+  G SE VFE+T K    SD D+           FD  P F+P T + ++++ A   G  R+    A G     G+G++ C  ++VLCFFPF+RG+ +  G  GIPWS   K++ L  +FV +CK
Sbjct:  592 YNTYNFMEYMACGLSARAWWNNHRMQRIISVSAWTLAFLTVLLKSLGLSETVFEVTGKDKSMSDDDDNTDGADPGRFTFDSLPVFIPVTALAMLNIVAVTVGACRVAFGTAEGVPCAPGIGEFMCCGWLVLCFFPFVRGIVWGKGSYGIPWSVKLKASLLVAMFVTFCK 760          
BLAST of EY680141 vs. ExPASy Swiss-Prot
Match: CSLH2_ORYSI (Cellulose synthase-like protein H2 OS=Oryza sativa subsp. indica GN=CSLH2 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 5.782e-28
Identity = 64/169 (37.87%), Postives = 93/169 (55.03%), Query Frame = 2
Query:    2 YKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSSDVDE---------VMFDDSPFFVPGTTIILVHLAAWATGLLRLQSQCAHG----SGLGDYFCSVYVVLCFFPFLRGL-FMTGKKGIPWSTIGKSTALALLFVQWCK 466
            Y  Y  +EY+  GLS R+WW N+ M RI++ SAW    +   L+  G SE VFE+T K    SD D+           FD  P F+P T + ++++ A   G  R+    A G     G+G++ C  ++VLCFFPF+RG+ +  G  GIPWS   K++ L  +FV +CK
Sbjct:  592 YNTYNFMEYMACGLSARAWWNNHRMQRIISVSAWTLAFLTVLLKSLGLSETVFEVTGKDKSMSDDDDNTDGADPGRFTFDSLPVFIPVTALAMLNIVAVTVGACRVAFGTAEGVPCAPGIGEFMCCGWLVLCFFPFVRGIVWGKGSYGIPWSVKLKASLLVAMFVTFCK 760          
BLAST of EY680141 vs. ExPASy Swiss-Prot
Match: CSLB4_ARATH (Cellulose synthase-like protein B4 OS=Arabidopsis thaliana GN=CSLB4 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.870e-27
Identity = 69/167 (41.32%), Postives = 97/167 (58.08%), Query Frame = 2
Query:    8 LYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSS------------------DVDEVMFDDSPFFVPGTTIILVHLAAWATGLLRLQSQCAHGSGLGDYFCSVYVVLCFFPFLRGLFMTGKKGIPWSTIGKSTALALLFV 454
            LYTL E++  G SI+SW+V     RI TT +WLF +++  L+  G S+ VF +T+K    +                  D  +  FD S +F+PGT I+LV+LAA A  L+ LQS+   GSGL +    + VV+ F PFL+G+F  GK GIP+ST+ K+  LA LFV
Sbjct:  583 LYTLWEFMNLGFSIQSWYVTQSFGRIKTTCSWLFSVLDVILKLLGISKTVFIVTKKTMPETKSGSGSKKSQREVDCPNQDSGKFEFDGSLYFLPGTFIVLVNLAALAGCLVGLQSRGGGGSGLAEACGCILVVILFLPFLKGMFEKGKYGIPFSTLSKAAFLAALFV 749          
BLAST of EY680141 vs. ExPASy Swiss-Prot
Match: CSLB3_ARATH (Cellulose synthase-like protein B3 OS=Arabidopsis thaliana GN=CSLB3 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.057e-25
Identity = 65/167 (38.92%), Postives = 94/167 (56.29%), Query Frame = 2
Query:    8 LYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSS------------------DVDEVMFDDSPFFVPGTTIILVHLAAWATGLLRLQSQCAHGSGLGDYFCSVYVVLCFFPFLRGLFMTGKKGIPWSTIGKSTALALLFV 454
            LY+L E++  G S++SW+ +    RI TT +WLF + +  L+  G S+ VF +T+K    +                  D  +  FD S +F+PGT I+LV+LAA A   + LQ     GSGL +    + VV+ F PFL+G+F  GK GIPWST+ K+  LA+LFV
Sbjct:  583 LYSLWEFMSLGFSVQSWFASQSFWRIKTTCSWLFSIPDIILKLLGISKTVFIVTKKTMPKTMSGSGSEKSQREVDCPNQDSGKFEFDGSLYFLPGTFILLVNLAALAGCSVGLQRHRGGGSGLAEACGCILVVILFLPFLKGMFEKGKYGIPWSTLSKAAFLAVLFV 749          
BLAST of EY680141 vs. ExPASy Swiss-Prot
Match: CSLH3_ORYSJ (Putative cellulose synthase-like protein H3 OS=Oryza sativa subsp. japonica GN=CSLH3 PE=3 SV=3)

HSP 1 Score: 113.235 bits (282), Expect = 7.815e-25
Identity = 61/164 (37.20%), Postives = 89/164 (54.27%), Query Frame = 2
Query:    2 YKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSSD----VDEV-----MFDDSPFFVPGTTIILVHLAAWATGLLR----LQSQCAHGSGLGDYFCSVYVVLCFFPFLRGLFMTGKKGIPWSTIGKSTALALLFV 454
            Y  Y  +EY++ GLS+R+WW N+ M RI++ SAWL       L+  G SE VFE+T+K   +SD     DEV      FD SP F+P T + ++++ A   G  R           G G+ ++    +++LC  PF+RGL   G  GIPWS   K++ L  LF+
Sbjct:  623 YNTYNFVEYMECGLSVRAWWNNHRMQRIISASAWLLAFFTVLLKTIGLSETVFEVTRKEKSTSDGNGQNDEVDPERFTFDASPVFIPVTALTMLNIVAITIGTWRAVFGTTEDVPGGPGISEFMSCGWLLLCLLPFVRGLVGKGSYGIPWSVKLKASLLVALFL 786          
BLAST of EY680141 vs. ExPASy Swiss-Prot
Match: CSLB5_ARATH (Cellulose synthase-like protein B5 OS=Arabidopsis thaliana GN=CSLB5 PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 7.815e-25
Identity = 68/174 (39.08%), Postives = 101/174 (58.05%), Query Frame = 2
Query:    8 LYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQK-------IHRSS-----------DVDEVMFDDSPFFVPGTTIILVHLAAWATGLLRLQ-SQCAHG---SGLGDYFCSVYVVLCFFPFLRGLFMTGKKGIPWSTIGKSTALALLFVQWC 463
            LY+L +++  G S++SW+V   + RI+ TS+WLF + +  L+  G S+  F I +K       ++ S            ++ +  FD S  F+PGT I+LV+LAA A  L+RLQ S C+HG   SGL +    + VV+ F PFL+GLF  GK  IP ST+ K+  L +LFV +C
Sbjct:  581 LYSLWQFMSLGFSVQSWYVVQSLWRIIATSSWLFSIQDIILKLLGISQIGFVIAKKTIPETKSVYESKPSQGEDDVPKLNLGKFEFDSSGLFIPGTFIMLVNLAALAGYLVRLQRSSCSHGGGGSGLAEACGCILVVMLFLPFLKGLFEHGKYSIPLSTLSKAAFLTVLFVFFC 754          
BLAST of EY680141 vs. ExPASy Swiss-Prot
Match: CSLH1_ORYSJ (Cellulose synthase-like protein H1 OS=Oryza sativa subsp. japonica GN=CSLH1 PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 1.333e-24
Identity = 61/168 (36.31%), Postives = 90/168 (53.57%), Query Frame = 2
Query:    2 YKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSSDVD---------EVMFDDSPFFVPGTTIILVHLAAWATGLLRL----QSQCAHGSGLGDYFCSVYVVLCFFPFLRGLFMTGKKGIPWSTIGKSTALALLFVQWCK 466
            Y  Y  +E+I+ G S R+ W N+ M RI + SAWL   +   L+  GFSE VFE+T+K   +SD D            FD+S  F+P T + ++ + A A G  R+          G G+ ++    ++VLCF P LRGL  +G+ GIPWS   K+  L  +F+ +CK
Sbjct:  581 YNTYMFMEFIECGQSARACWNNHRMQRITSASAWLLAFLTVILKTLGFSETVFEVTRKDKSTSDGDSNTDEPEPGRFTFDESTVFIPVTALAMLSVIAIAVGAWRVVLVTTEGLPGGPGISEFISCGWLVLCFMPLLRGLVGSGRYGIPWSIKMKACLLVAIFLLFCK 748          
BLAST of EY680141 vs. ExPASy Swiss-Prot
Match: CSLB2_ARATH (Cellulose synthase-like protein B2 OS=Arabidopsis thaliana GN=CSLB2 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.274e-24
Identity = 71/170 (41.76%), Postives = 98/170 (57.65%), Query Frame = 2
Query:    8 LYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKI--------------HRSSD---VDEVMFDDSPFFVPGTTIILVHLAAWATGLLRLQ-SQCAHG---SGLGDYFCSVYVVLCFFPFLRGLFMTGKKGIPWSTIGKSTALALLFV 454
            LYTL E++  G SI+SW+V+    RIV TS+WLF + +  L+  G S+ VF +++K                R  D     +  FD S +F+PGT I+LV+LAA     + LQ S  +HG   SGLG+    + VV+ FFPFL+GLF  GK GIP ST+ K+  LA+ FV
Sbjct:  582 LYTLWEFMCLGHSIQSWYVSQSFWRIVATSSWLFSIFDIILKLLGLSKNVFLVSKKTMPVETMSGSGIGPSQREDDGPNSGKTEFDGSLYFLPGTFIVLVNLAALVGVFVGLQRSSYSHGGGGSGLGEACACILVVMLFFPFLKGLFAKGKYGIPLSTLSKAGFLAVSFV 751          
BLAST of EY680141 vs. ExPASy Swiss-Prot
Match: CSLB1_ARATH (Cellulose synthase-like protein B1 OS=Arabidopsis thaliana GN=CSLB1 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 1.474e-23
Identity = 70/171 (40.94%), Postives = 97/171 (56.73%), Query Frame = 2
Query:    8 LYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQK------------------IHRSSDVDEVMFDDSPFFVPGTTIILVHLAAWATGLLRLQ-SQCAH---GSGLGDYFCSVYVVLCFFPFLRGLFMTGKKGIPWSTIGKSTALALLFV 454
            LYTL E++  G S++SW V+  + RIV TS+WLF + +  L+  G SE VF IT+K                  +  +SD+ +  FD S  F+PGT I+LV++AA A   + LQ S  +H   GSGL +    V V++ F PFL GLF  GK G P ST+  +  LA+LFV
Sbjct:  583 LYTLWEFMSLGYSVQSWLVSQSVWRIVATSSWLFSIFDITLKLLGISETVFIITKKTVAGTKSALGSGPSQGEDVGPNSDLFKFEFDGSLCFLPGTFIVLVNIAALAVFSVGLQRSSYSHEGGGSGLAEACGCVLVMMLFLPFLMGLFKKGKYGTPLSTLSIAGFLAVLFV 753          
BLAST of EY680141 vs. ExPASy Swiss-Prot
Match: CSLB6_ARATH (Cellulose synthase-like protein B6 OS=Arabidopsis thaliana GN=CSLB6 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 1.248e-22
Identity = 64/176 (36.36%), Postives = 96/176 (54.55%), Query Frame = 2
Query:    8 LYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSS--------------------DVDEVMFDDSPFFVPGTTIILVHLAAWATGLLRLQ-SQCAHGSGLGDYFCS----VYVVLCFFPFLRGLFMTGKKGIPWSTIGKSTALALLFVQW 460
            LYTL +++  G S++SW+V+  + RI+ TS+WLF + +  L+  G S+  F + +K    +                    ++ +  FD S  F+PGT I+LV+LAA A  L+RLQ S  +HG G G           +V+ FFPFL+GLF  GK GIP ST+ K+  L +LF  +
Sbjct:  580 LYTLWQFMILGFSVKSWYVSQSLWRIIATSSWLFSIQDIILKLLGISKIGFIVAKKNMPETRSGYESKSKPSQGEDDGLKLELGKFEFDSSCHFIPGTFIMLVNLAALAGFLVRLQRSSYSHGGGGGSALAETCGCAMIVMLFFPFLKGLFEHGKYGIPLSTLSKAAFLTVLFASY 755          
The following BLAST results are available for this feature:
BLAST of EY680141 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
CSLH2_ORYSJ5.782e-2837.87Cellulose synthase-like protein H2 OS=Oryza sativa... [more]
CSLH2_ORYSI5.782e-2837.87Cellulose synthase-like protein H2 OS=Oryza sativa... [more]
CSLB4_ARATH2.870e-2741.32Cellulose synthase-like protein B4 OS=Arabidopsis ... [more]
CSLB3_ARATH2.057e-2538.92Cellulose synthase-like protein B3 OS=Arabidopsis ... [more]
CSLH3_ORYSJ7.815e-2537.20Putative cellulose synthase-like protein H3 OS=Ory... [more]
CSLB5_ARATH7.815e-2539.08Cellulose synthase-like protein B5 OS=Arabidopsis ... [more]
CSLH1_ORYSJ1.333e-2436.31Cellulose synthase-like protein H1 OS=Oryza sativa... [more]
CSLB2_ARATH2.274e-2441.76Cellulose synthase-like protein B2 OS=Arabidopsis ... [more]
CSLB1_ARATH1.474e-2340.94Cellulose synthase-like protein B1 OS=Arabidopsis ... [more]
CSLB6_ARATH1.248e-2236.36Cellulose synthase-like protein B6 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-007-H03-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680141 ID=EY680141; Name=EY680141; organism=Citrus sinensis; type=EST; length=540bp
CTACAAATTATATACTCTATTAGAGTACATTCAAGCTGGTTTATCAATCC
GTTCATGGTGGGTTAACAATTGTATGGCCCGAATTGTCACAACAAGTGCA
TGGTTATTTGGTCTTGTAAACGCCGCGCTCGAGCAGTTTGGATTCTCCGA
GGCAGTTTTTGAAATTACGCAAAAAATTCATCGATCTAGCGATGTCGATG
AAGTGATGTTCGACGACTCTCCTTTCTTTGTTCCCGGCACCACAATTATT
CTGGTGCACCTCGCTGCATGGGCTACCGGCTTGCTAAGGTTGCAATCACA
ATGTGCGCATGGCTCAGGGCTAGGAGACTACTTTTGCAGTGTGTATGTGG
TGCTATGCTTCTTTCCTTTTTTGCGAGGGCTATTCATGACAGGGAAAAAG
GGGATCCCGTGGTCAACCATTGGCAAATCAACTGCTTTAGCTCTGCTTTT
TGTGCAATGGTGTAAGATGATGAGCTCTATGAACTGAGATTTTTATTTTA
AGCGGGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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