EY650472

Overview
NameEY650472
Unique NameEY650472
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length931
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650472 vs. ExPASy Swiss-Prot
Match: ESRP1_RAT (Epithelial splicing regulatory protein 1 OS=Rattus norvegicus GN=Esrp1 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.587e-14
Identity = 62/199 (31.16%), Postives = 89/199 (44.72%), Query Frame = 3
Query:  345 VVRLRGLPFNCTDIDICKFFAGLDIVD---VLLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVASEVNYEGIYDNDFHGSPXPSRAKRYNDKDQMEHTEILKMRGLPFSVKKSEIVQFFKDYPDI---EDXIHIACRPDXXXXXXXXXXXXSVKGAXRACVKTRDNC-FXYVXLFPST 920
            VVR RGLP+  +D DI +FF GL+I      L +N  GR +GEA V F      + ALQR + +MG RY+EV++   +D+        N                   ++  K   E+  I++MRGLPF+    E+V FF  +  I   ++ I     PD              + A  A  K +D     Y+ LF ST
Sbjct:  226 VVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSN----------------EVAQFLSK---ENQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRST 405          
BLAST of EY650472 vs. ExPASy Swiss-Prot
Match: ESRP1_HUMAN (Epithelial splicing regulatory protein 1 OS=Homo sapiens GN=ESRP1 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.587e-14
Identity = 62/199 (31.16%), Postives = 89/199 (44.72%), Query Frame = 3
Query:  345 VVRLRGLPFNCTDIDICKFFAGLDIVD---VLLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVASEVNYEGIYDNDFHGSPXPSRAKRYNDKDQMEHTEILKMRGLPFSVKKSEIVQFFKDYPDI---EDXIHIACRPDXXXXXXXXXXXXSVKGAXRACVKTRDNC-FXYVXLFPST 920
            VVR RGLP+  +D DI +FF GL+I      L +N  GR +GEA V F      + ALQR + +MG RY+EV++   +D+        N                   ++  K   E+  I++MRGLPF+    E+V FF  +  I   ++ I     PD              + A  A  K +D     Y+ LF ST
Sbjct:  226 VVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSN----------------EVAQFLSK---ENQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRST 405          
BLAST of EY650472 vs. ExPASy Swiss-Prot
Match: ESRP1_MOUSE (Epithelial splicing regulatory protein 1 OS=Mus musculus GN=Esrp1 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 4.413e-14
Identity = 49/140 (35.00%), Postives = 70/140 (50.00%), Query Frame = 3
Query:  345 VVRLRGLPFNCTDIDICKFFAGLDIVD---VLLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVASEVNYEGIYDNDFHGSPXPSRAKRYNDKDQMEHTEILKMRGLPFSVKKSEIVQFF 755
            VVR RGLP+  +D DI +FF GL+I      L +N  GR +GEA V F      + ALQR + +MG RY+EV++   +D+        N                   ++  K   E+  I++MRGLPF+    E+V FF
Sbjct:  225 VVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSN----------------EVAQFLSK---ENQVIVRMRGLPFTATAEEVVAFF 345          
BLAST of EY650472 vs. ExPASy Swiss-Prot
Match: HNRPF_RAT (Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus GN=Hnrnpf PE=1 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 7.528e-14
Identity = 59/198 (29.80%), Postives = 94/198 (47.47%), Query Frame = 3
Query:  345 VVRLRGLPFNCTDIDICKFFAGLDIVDVL-----LVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVASEVNYEGIYDNDFHGSPXPSRAKRYNDKDQMEHTEILKMRGLPFSVKKSEIVQFFKDYPDIEDXIHIACRPDXXXXXXXXXXXXSVKGAXRACVKTRDNC-FXYVXLFPST 920
            VV+LRGLP++C+  D+  F +   I D +     +  + GR SGEAFV       V+ AL++DR++MG RY+EVF+  R +    +   + + G           P+ A   ND         +++RGLPF   K EIVQFF     + + I +   P+            S + A +A  K ++     Y+ +F S+
Sbjct:   12 VVKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTE----MDWVLKHSG-----------PNSADSAND-------GFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSS 187          

HSP 2 Score: 70.8626 bits (172), Expect = 1.202e-11
Identity = 36/78 (46.15%), Postives = 52/78 (66.67%), Query Frame = 3
Query:  348 VRLRGLPFNCTDIDICKFFAGLDIVD---VLLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQD 572
            VRLRGLPF CT  +I +FF+GL+IV     L V+  G+ +GEAFV FA     E AL + ++ +G RY+EVF+  +++
Sbjct:  113 VRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEE 190          
BLAST of EY650472 vs. ExPASy Swiss-Prot
Match: HNRPF_MOUSE (Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus GN=Hnrnpf PE=1 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 7.528e-14
Identity = 59/198 (29.80%), Postives = 94/198 (47.47%), Query Frame = 3
Query:  345 VVRLRGLPFNCTDIDICKFFAGLDIVDVL-----LVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVASEVNYEGIYDNDFHGSPXPSRAKRYNDKDQMEHTEILKMRGLPFSVKKSEIVQFFKDYPDIEDXIHIACRPDXXXXXXXXXXXXSVKGAXRACVKTRDNC-FXYVXLFPST 920
            VV+LRGLP++C+  D+  F +   I D +     +  + GR SGEAFV       V+ AL++DR++MG RY+EVF+  R +    +   + + G           P+ A   ND         +++RGLPF   K EIVQFF     + + I +   P+            S + A +A  K ++     Y+ +F S+
Sbjct:   12 VVKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTE----MDWVLKHSG-----------PNSADSAND-------GFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSS 187          

HSP 2 Score: 70.8626 bits (172), Expect = 1.202e-11
Identity = 36/78 (46.15%), Postives = 52/78 (66.67%), Query Frame = 3
Query:  348 VRLRGLPFNCTDIDICKFFAGLDIVD---VLLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQD 572
            VRLRGLPF CT  +I +FF+GL+IV     L V+  G+ +GEAFV FA     E AL + ++ +G RY+EVF+  +++
Sbjct:  113 VRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEE 190          
BLAST of EY650472 vs. ExPASy Swiss-Prot
Match: HNRPF_MACFA (Heterogeneous nuclear ribonucleoprotein F OS=Macaca fascicularis GN=HNRNPF PE=2 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 7.528e-14
Identity = 59/198 (29.80%), Postives = 93/198 (46.97%), Query Frame = 3
Query:  345 VVRLRGLPFNCTDIDICKFFAGLDIVDV-----LLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVASEVNYEGIYDNDFHGSPXPSRAKRYNDKDQMEHTEILKMRGLPFSVKKSEIVQFFKDYPDIEDXIHIACRPDXXXXXXXXXXXXSVKGAXRACVKTRDNC-FXYVXLFPST 920
            VV+LRGLP++C+  D+  F +   I D       +  + GR SGEAFV       V+ AL++DR++MG RY+EVF+  R +    +   + + G           P+ A   ND         +++RGLPF   K EIVQFF     + + I +   P+            S + A +A  K ++     Y+ +F S+
Sbjct:   12 VVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVFKSHRTE----MDWVLKHSG-----------PNSADSAND-------GFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSS 187          

HSP 2 Score: 70.8626 bits (172), Expect = 1.202e-11
Identity = 36/78 (46.15%), Postives = 52/78 (66.67%), Query Frame = 3
Query:  348 VRLRGLPFNCTDIDICKFFAGLDIVD---VLLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQD 572
            VRLRGLPF CT  +I +FF+GL+IV     L V+  G+ +GEAFV FA     E AL + ++ +G RY+EVF+  +++
Sbjct:  113 VRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEE 190          
BLAST of EY650472 vs. ExPASy Swiss-Prot
Match: HNRPF_HUMAN (Heterogeneous nuclear ribonucleoprotein F OS=Homo sapiens GN=HNRNPF PE=1 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 7.528e-14
Identity = 59/198 (29.80%), Postives = 93/198 (46.97%), Query Frame = 3
Query:  345 VVRLRGLPFNCTDIDICKFFAGLDIVDV-----LLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVASEVNYEGIYDNDFHGSPXPSRAKRYNDKDQMEHTEILKMRGLPFSVKKSEIVQFFKDYPDIEDXIHIACRPDXXXXXXXXXXXXSVKGAXRACVKTRDNC-FXYVXLFPST 920
            VV+LRGLP++C+  D+  F +   I D       +  + GR SGEAFV       V+ AL++DR++MG RY+EVF+  R +    +   + + G           P+ A   ND         +++RGLPF   K EIVQFF     + + I +   P+            S + A +A  K ++     Y+ +F S+
Sbjct:   12 VVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMALKKDRESMGHRYIEVFKSHRTE----MDWVLKHSG-----------PNSADSAND-------GFVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSS 187          

HSP 2 Score: 71.633 bits (174), Expect = 7.046e-12
Identity = 66/250 (26.40%), Postives = 96/250 (38.40%), Query Frame = 3
Query:  348 VRLRGLPFNCTDIDICKFFAGLDIVD---VLLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQDY---------------------------YNAVASEVNYE----GIYDNDFHGSPXPSRAK------------------------RYNDKD---QMEHTEILKMRGLPFSVKKSEIVQFFKDYPDIEDXIHIACRPDXXXXXXXXXXXXSVKGAXRACVKTRDNC-FXYVXLF 911
            VRLRGLPF CT  +I +FF+GL+IV     L V+  G+ +GEAFV FA     E AL + ++ +G RY+EVF+  +++                            Y  +  +   E    G Y   + G    S                           RY D +   Q      + MRGLP+   +++I  FF     +   +HI   PD            + + A  A  K R N    Y+ LF
Sbjct:  113 VRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEEVRSYSDPPLKFMSVQRPGPYDRPGTARRYIGIVKQAGLERMRPGAYSTGYGGYEEYSGLSDGYGFTTDLFGRDLSYCLSGMYDHRYGDSEFTVQSTTGHCVHMRGLPYKATENDIYNFFSPLNPVR--VHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHRYIELF 360          
BLAST of EY650472 vs. ExPASy Swiss-Prot
Match: HNRPF_BOVIN (Heterogeneous nuclear ribonucleoprotein F OS=Bos taurus GN=HNRNPF PE=2 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 9.832e-14
Identity = 58/198 (29.29%), Postives = 94/198 (47.47%), Query Frame = 3
Query:  345 VVRLRGLPFNCTDIDICKFFAGLDIVDVL-----LVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVASEVNYEGIYDNDFHGSPXPSRAKRYNDKDQMEHTEILKMRGLPFSVKKSEIVQFFKDYPDIEDXIHIACRPDXXXXXXXXXXXXSVKGAXRACVKTRDNC-FXYVXLFPST 920
            VV+LRGLP++C+  D+  F +   I D +     +  + GR SGEAFV       V+ AL++DR++MG RY+EVF+  R +    +   + + G           P+ A   ND         +++RGLPF   K EI+QFF     + + I +   P+            S + A +A  K ++     Y+ +F S+
Sbjct:   12 VVKLRGLPWSCSVEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLALKKDRESMGHRYIEVFKSHRTE----MDWVLKHSG-----------PNSADTAND-------GFVRLRGLPFGCTKEEIIQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSS 187          

HSP 2 Score: 70.8626 bits (172), Expect = 1.202e-11
Identity = 36/78 (46.15%), Postives = 52/78 (66.67%), Query Frame = 3
Query:  348 VRLRGLPFNCTDIDICKFFAGLDIVD---VLLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQD 572
            VRLRGLPF CT  +I +FF+GL+IV     L V+  G+ +GEAFV FA     E AL + ++ +G RY+EVF+  +++
Sbjct:  113 VRLRGLPFGCTKEEIIQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGKHKERIGHRYIEVFKSSQEE 190          
BLAST of EY650472 vs. ExPASy Swiss-Prot
Match: ESRP1_XENTR (Epithelial splicing regulatory protein 1 OS=Xenopus tropicalis GN=esrp1 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.284e-13
Identity = 46/140 (32.86%), Postives = 70/140 (50.00%), Query Frame = 3
Query:  345 VVRLRGLPFNCTDIDICKFFAGLDIVD---VLLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVASEVNYEGIYDNDFHGSPXPSRAKRYNDKDQMEHTEILKMRGLPFSVKKSEIVQFF 755
            ++R RGLP+  +D DI +FF GL+I      L +N  GR +GEA V F      + ALQR + +MG RY+EV++   +D+        N                   ++  K   E+  I++MRGLPF+    E++ FF
Sbjct:  227 IIRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGTSN----------------EVAQFLSK---ENQVIVRMRGLPFTATAEEVLAFF 347          
BLAST of EY650472 vs. ExPASy Swiss-Prot
Match: ESRP1_XENLA (Epithelial splicing regulatory protein 1 OS=Xenopus laevis GN=esrp1 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.284e-13
Identity = 46/140 (32.86%), Postives = 70/140 (50.00%), Query Frame = 3
Query:  345 VVRLRGLPFNCTDIDICKFFAGLDIVD---VLLVNKNGRFSGEAFVVFAGPIQVEFALQRDRQNMGRRYVEVFRCKRQDYYNAVASEVNYEGIYDNDFHGSPXPSRAKRYNDKDQMEHTEILKMRGLPFSVKKSEIVQFF 755
            ++R RGLP+  +D DI +FF GL+I      L +N  GR +GEA V F      + ALQR + +MG RY+EV++   +D+        N                   ++  K   E+  I++MRGLPF+    E++ FF
Sbjct:  227 IIRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGNRYIEVYKATGEDFLKIAGGTSN----------------EVAQFLSK---ENQVIVRMRGLPFTATAEEVLAFF 347          
The following BLAST results are available for this feature:
BLAST of EY650472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
ESRP1_RAT2.587e-1431.16Epithelial splicing regulatory protein 1 OS=Rattus... [more]
ESRP1_HUMAN2.587e-1431.16Epithelial splicing regulatory protein 1 OS=Homo s... [more]
ESRP1_MOUSE4.413e-1435.00Epithelial splicing regulatory protein 1 OS=Mus mu... [more]
HNRPF_RAT7.528e-1429.80Heterogeneous nuclear ribonucleoprotein F OS=Rattu... [more]
HNRPF_MOUSE7.528e-1429.80Heterogeneous nuclear ribonucleoprotein F OS=Mus m... [more]
HNRPF_MACFA7.528e-1429.80Heterogeneous nuclear ribonucleoprotein F OS=Macac... [more]
HNRPF_HUMAN7.528e-1429.80Heterogeneous nuclear ribonucleoprotein F OS=Homo ... [more]
HNRPF_BOVIN9.832e-1429.29Heterogeneous nuclear ribonucleoprotein F OS=Bos t... [more]
ESRP1_XENTR1.284e-1332.86Epithelial splicing regulatory protein 1 OS=Xenopu... [more]
ESRP1_XENLA1.284e-1332.86Epithelial splicing regulatory protein 1 OS=Xenopu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-011-D07-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650472 ID=EY650472; Name=EY650472; organism=Citrus sinensis; type=EST; length=931bp
CCCACGCGTCCGCCCACGCGTCCGGTTTGAGCTTTGAGTTTAGGGTTCTT
TTTGTTTTTTGGTCTCTGTACGATCGAGTTTCCTATTAGGGTTTGTTCTA
ATTTCATCATCATCAGCAAGATAATCGAAGAAGCTGAGAAAGAATTGAAT
TTTCAACAGTAAAAGCTATGTACGGATCCAGAGGGGCAATATTGGGAAGC
GGGGGGGTTTCGGACGGGTACGAGGTCGGCTCAAAGAGACAAAGAATGAT
GGAACCAAATCCTTACTTCGCAGTGAGCAGCAGTGCAAGTGGCTTTCAAC
CTTACGGCTATGGTGGTGGGTTTCCACCCCCGCCTTCCTTTCCTGTTGTT
CGCCTCAGGGGGCTGCCATTTAACTGCACTGATATTGACATTTGCAAGTT
CTTTGCTGGACTGGATATTGTGGATGTGTTGCTGGTCAACAAGAATGGAC
GCTTCTCAGGAGAGGCTTTTGTTGTCTTTGCTGGGCCCATACAAGTTGAG
TTTGCTTTACAGAGAGATCGGCAGAACATGGGGCGTCGGTATGTTGAAGT
TTTCAGGTGCAAGAGACAGGATTACTACAATGCCGTGGCTTCAGAGGTGA
ATTATGAAGGGATCTATGATAATGATTTCCATGGAAGTCCTNCACCATCA
CGAGCTAAGAGGTACAATGATAAAGATCAAATGGAACACACTGAAATTTT
GAAGATGCGTGGTCTTCCTTTCTCTGTGAAGAAATCTGAAATAGTTCAAT
TCTTTAAAGACTACCCAGATATTGAGGATNAGATACACATTGCATGCCGA
CCTGATGGTANGGCTACCGGNTGAGCATATGTGGGAGTTGTTTCTGTAAA
AGGAGCTAANAGAGCATGTGTAAAGACCAGAGACAATTGTTTCNAGTATG
TCNAGCTGTTCCCTTCCACCTGATGAGCTCG
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