EY650458
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY650458 vs. ExPASy Swiss-Prot
Match: NPCL1_MOUSE (Niemann-Pick C1-like protein 1 OS=Mus musculus GN=Npc1l1 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.740e-37 Identity = 90/236 (38.14%), Postives = 126/236 (53.39%), Query Frame = 3 Query: 18 LSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLRVGPPLYF-VVKDYNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAASWLDDFLVWTSPEAFGCCRKFVNGTYXXXXXXXXXXXXXXXXXGVNGVCKDCTTCFRHSDLVNNRPSTEQFMEKLPWFLNALPSADCAKGGHGAYSTSVDLNGYESGIIQASEFRTFHTPLNKQXDLCNSLRAARXVSSRMSDTLK 722 L I GL+Q + LP+DSYL YF YL VGPP+YF YN+S+E+ N +CS + C+S SL +I AS P SY+A A+SW+DDF+ W +P + CCR + G + +C + L RP+TEQF + LPWFLN P+ C KGG AY TSV+L+ G I AS+F +H PL D +LRA+R +++ ++ L+ Sbjct: 863 LMCNISVGLDQDLALPKDSYLIDYFLFLNRYLEVGPPVYFDTTSGYNFSTEA-GMNAICSSAGCESFSLTQKIQYASEFPNQSYVAIAASSWVDDFIDWLTPSS-SCCRIYTRGPHKDEFCPS------------TDTSFNCLKNCMNRTLGPVRPTTEQFHKYLPWFLNDTPNIRCPKGGLAAYRTSVNLS--SDGQIIASQFMAYHKPLRNSQDFTEALRASRLLAANITAELR 1082
BLAST of EY650458 vs. ExPASy Swiss-Prot
Match: NPCL1_RAT (Niemann-Pick C1-like protein 1 OS=Rattus norvegicus GN=Npc1l1 PE=1 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 1.056e-36 Identity = 89/236 (37.71%), Postives = 127/236 (53.81%), Query Frame = 3 Query: 18 LSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLRVGPPLYFV-VKDYNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAASWLDDFLVWTSPEAFGCCRKFVNGTYXXXXXXXXXXXXXXXXXGVNGVCKDCTTCFRHSDLVNNRPSTEQFMEKLPWFLNALPSADCAKGGHGAYSTSVDLNGYESGIIQASEFRTFHTPLNKQXDLCNSLRAARXVSSRMSDTLK 722 L I GL+Q++ LP+DSYL YF YL VGPP+YFV +N+SSE+ N CS + C S SL +I AS P+ SY+A A+SW+DDF+ W +P + CCR ++ G + +C + L RP+ EQF + LPWFLN P+ C KGG AY TSV+L+ G + AS+F +H PL D +LRA+R +++ ++ L+ Sbjct: 863 LMCNINVGLDQELALPKDSYLIDYFLFLNRYLEVGPPVYFVTTSGFNFSSEA-GMNATCSSAGCKSFSLTQKIQYASEFPDQSYVAIAASSWVDDFIDWLTPSS-SCCRLYIRGPHKDEFCPS------------TDTSFNCLKNCMNRTLGPVRPTAEQFHKYLPWFLNDPPNIRCPKGGLAAYRTSVNLS--SDGQVIASQFMAYHKPLRNSQDFTEALRASRLLAANITADLR 1082
BLAST of EY650458 vs. ExPASy Swiss-Prot
Match: NPCL1_HUMAN (Niemann-Pick C1-like protein 1 OS=Homo sapiens GN=NPC1L1 PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 1.093e-33 Identity = 92/257 (35.80%), Postives = 129/257 (50.19%), Query Frame = 3 Query: 30 IEAGLEQQIVLPRDSYLQGYFDNTTEYLRVGPPLYFVVK-DYNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAASWLDDFLVWTSPEAFGCCRKFVNGTYXXXXXXXXXXXXXXXXXGVNGVCKDCTTCFRHSDLVNNRPSTEQFMEKLPWFLNALPSADCAKGGHGAYSTSVDLNG---------------YESGII----------QASEFRTFHTPLNKQXDLCNSLRAARXVSSRMSDTLK 722 I GL+Q++ LP+DSYL YF Y VG P+YFV YN+SSE+ N +CS + C++ S +I A+ PE SY+A PA+SW+DDF+ W +P + CCR +++G VN + +C + + RPS EQF + LPWFLN P+ C KGG AYSTSV+L SG I AS F +H PL D +LRAAR +++ ++ L+ Sbjct: 867 ISVGLDQELALPKDSYLLDYFLFLNRYFEVGAPVYFVTTLGYNFSSEAG-MNAICSSAGCNNFSFTQKIQYATEFPEQSYLAIPASSWVDDFIDWLTPSS--CCRLYISG----------PNKDKFCPSTVNSL--NCLKNCMSITMGSVRPSVEQFHKYLPWFLNDRPNIKCPKGGLAAYSTSVNLTSDGQVLDTVAILSPRLEYSGTISAHCNLYLLDSASRFMAYHKPLKNSQDYTEALRAARELAANITADLR 1108
BLAST of EY650458 vs. ExPASy Swiss-Prot
Match: NPC1_PIG (Niemann-Pick C1 protein OS=Sus scrofa GN=NPC1 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.515e-32 Identity = 79/237 (33.33%), Postives = 129/237 (54.43%), Query Frame = 3 Query: 12 IALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLRVGPPLYFVVKD-YNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAASWLDDFLVWTSPEAFGCCRKFVNGTYXXXXXXXXXXXXXXXXXGVNGVCKDCTTCFRHSDLVNNRPSTEQFMEKLPWFLNALPSADCAKGGHGAYSTSVDLNGYESGIIQASEFRTFHTPLNKQXDLCNSLRAARXVSSRMSDTL 719 IA+ ++E GL+Q + +P DSY+ YF + + YL GPP+YFVV++ +NY+S + N +C C+++SL+ +I A+ + + I +SW+DD+ W P++ CCR + N T + V C C + RP E FM LP FL+ P+ C KGGH AYS++V++ G SG + A+ F T+HT L D ++++ AR ++S ++ T+ Sbjct: 850 IAVLNKVEIGLDQSLSMPDDSYVMDYFQSLSRYLHAGPPVYFVVEEGHNYTS-LKGQNMVCGGLGCNNDSLVQQIFTAAQLDNYTRIGFAPSSWIDDYFDWIKPQS-SCCRVY-NST--------------DQFCNASVVDPTCIRCRPLTSEGKQRPQGEDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILGNGSG-VGATYFMTYHTVLQASADFIDAMQKARLIASNITRTM 1068
BLAST of EY650458 vs. ExPASy Swiss-Prot
Match: NPC1_MOUSE (Niemann-Pick C1 protein OS=Mus musculus GN=Npc1 PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.278e-31 Identity = 74/238 (31.09%), Postives = 132/238 (55.46%), Query Frame = 3 Query: 12 IALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLRVGPPLYFVVKD-YNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAASWLDDFLVWTSPEAFGCCRKFVNGTYXXXXXXXXXXXXXXXXXGVNGVCKDCTTCFRHSDLVNNRPSTEQFMEKLPWFLNALPSADCAKGGHGAYSTSVDLNGYESGIIQASEFRTFHTPLNKQXDLCNSLRAARXVSSRMSDTLK 722 +A+ +++ GL+Q + +P DSY+ F + +YL GPP+YFV+++ YNYSS + N +C CD++SL+ +I A+ + + + +SW+DD+ W SP++ CCR + N T+ + + C C + RP ++FM+ LP FL+ P+ C KGGH AY ++V++ G + I A+ F T+HT L D ++++ AR ++S +++T++ Sbjct: 851 VAVVNKVDIGLDQSLSMPNDSYVIANFKSLAQYLHSGPPVYFVLEEGYNYSSR-KGQNMVCGGMGCDNDSLVQQIFNAAELDTYTRVGFAPSSWIDDYFDWVSPQS-SCCRLY-NVTH--------------QFCNASVMDPTCVRCRPLTPEGKQRPQGKEFMKFLPMFLSDNPNPKCGKGGHAAYGSAVNIVG-DDTYIGATYFMTYHTILKTSADYTDAMKKARLIASNITETMR 1070
BLAST of EY650458 vs. ExPASy Swiss-Prot
Match: NPC1_HUMAN (Niemann-Pick C1 protein OS=Homo sapiens GN=NPC1 PE=1 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 4.297e-30 Identity = 70/236 (29.66%), Postives = 122/236 (51.69%), Query Frame = 3 Query: 12 IALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLRVGPPLYFVVKDYNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAASWLDDFLVWTSPEAFGCCRKFVNGTYXXXXXXXXXXXXXXXXXGVNGVCKDCTTCFRHSDLVNNRPSTEQFMEKLPWFLNALPSADCAKGGHGAYSTSVDLNGYESGIIQASEFRTFHTPLNKQXDLCNSLRAARXVSSRMSDTL 719 IA+ +++ GL+Q + +P DSY+ YF + ++YL GPP+YFV+++ + + S+ N +C C+++SL+ +I A+ + + I +SW+DD+ W P++ CCR + V C C + RP FM LP FL+ P+ C KGGH AYS++V++ + A+ F T+HT L D ++L+ AR ++S +++T+ Sbjct: 850 IAVLNKVDIGLDQSLSMPDDSYMVDYFKSISQYLHAGPPVYFVLEEGHDYTSSKGQNMVCGGMGCNNDSLVQQIFNAAQLDNYTRIGFAPSSWIDDYFDWVKPQS-SCCR---------------VDNITDQFCNASVVDPACVRCRPLTPEGKQRPQGGDFMRFLPMFLSDNPNPKCGKGGHAAYSSAVNILLGHGTRVGATYFMTYHTVLQTSADFIDALKKARLIASNVTETM 1069
BLAST of EY650458 vs. ExPASy Swiss-Prot
Match: NPC1_YEAST (Niemann-Pick type C-related protein 1 OS=Saccharomyces cerevisiae GN=NCR1 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.644e-23 Identity = 72/233 (30.90%), Postives = 106/233 (45.49%), Query Frame = 3 Query: 30 IEAGLEQQIVLPRDSYLQGYFDNTTEYLRVGPPLYFVVKDYNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAASWLDDFLVWTSPEAFGCCRKFVNGTYXXXXXXXXXXXXXXXXXGVNGVC------KDCTTCFRHSDLVNNR---PSTEQFMEKLPWFLNALPSADCAKGGHGAYSTSVDLNGYESGIIQASEFRTFHTPLNKQXDLCNSLRAARXVSS 701 I+ GL+Q + +P+DSYL YF + +L VGPP+Y VVK+ + + + C+ +SL N + + S I +P A+WLDD+ ++ +P+ CCR G + VC + C TCF+ N P + FME L ++NA PS C GG YST++ Y + AS FRT H PL Q D + +SS Sbjct: 770 IQFGLDQTLAVPQDSYLVDYFKDVYSFLNVGPPVYMVVKNLDLTKRQNQQKICGKFTTCERDSLANVLEQER---HRSTITEPLANWLDDYFMFLNPQNDQCCR---------------------LKKGTDEVCPPSFPSRRCETCFQQGSWNYNMSGFPEGKDFMEYLSIWINA-PSDPCPLGGRAPYSTAL---VYNETSVSASVFRTAHHPLRSQKDFIQAYSDGVRISS 974
BLAST of EY650458 vs. ExPASy Swiss-Prot
Match: NPC1_CAEEL (Niemann-Pick C1 protein homolog 1 OS=Caenorhabditis elegans GN=ncr-1 PE=1 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 9.928e-19 Identity = 63/247 (25.51%), Postives = 108/247 (43.72%), Query Frame = 3 Query: 12 IALSTRIEAGLEQQIVLPRDSYLQGYFDNTTEYLRVGPPLYFVVKDYNYSSESRHTNQLCSISQCDSNSLLNEISRASSIPELSYIAKPAASWLDDFLVWTSPEAFGCCRKFVNGTYXXXXXXXXXXXXXXXXXGVNGVCKDCTTC---------FRHSDLVNNRPSTEQFMEKLPWFLNALPSADCAKGGHGAYSTSVDLNGYESGIIQASEFRTFHTPL--NKQXDLCNSLRAARXVSSRMSDTL 719 + LS++I G +Q + SY+ +F ++ VGPP++F V N+ C+ C S N ++ A E +Y++ +W+D++L W S ++ CC+ +V+ K C TC + S ++ +RPS E F L FL P+++C GG ++ ++ G IQAS+F TFH L + D ++ AR VS R+ ++ Sbjct: 870 VILSSKISVGFDQSMAFTEKSYISTHFRYLDKFFDVGPPVFFTVDGELDWHRPDVQNKFCTFPGCSDTSFGNIMNYAVGHTEQTYLSGEMYNWIDNYLEWISRKS-PCCKVYVHDPNTFCSTNRNKSALDD---------KACRTCMDFDYVANSYPKSSIMYHRPSIEVFYRHLRHFLEDTPNSECVFGGRASFKDAISFT--SRGRIQASQFMTFHKKLSISNSSDFIKAMDTARMVSRRLERSI 1104 The following BLAST results are available for this feature:
BLAST of EY650458 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY650458 ID=EY650458; Name=EY650458; organism=Citrus sinensis; type=EST; length=912bpback to top |