EY650456

Overview
NameEY650456
Unique NameEY650456
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length918
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY650456 vs. ExPASy Swiss-Prot
Match: Y1934_ARATH (Uncharacterized protein At1g09340, chloroplastic OS=Arabidopsis thaliana GN=At1g09340 PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.628e-35
Identity = 72/82 (87.80%), Postives = 79/82 (96.34%), Query Frame = 2 
Query:   11 GHQVTLFTTGKAPIAQQLPGESYQEFAEFSSKILHLKGDRKDYDFVKSSLSAKGFDVVYDINGREADEVEPILDALPNLEQY 256
            GHQVTLFT GK+PIA+QLPGES Q+FA+FSSKILHLKGDRKDYDFVKSSLSA+GFDVVYDINGREA+EVEPIL+ALP LEQY
Sbjct:   77 GHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILEALPKLEQY 158
The following BLAST results are available for this feature:
BLAST of EY650456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1934_ARATH2.628e-3587.80Uncharacterized protein At1g09340, chloroplastic O... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-011-C03-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650456 ID=EY650456; Name=EY650456; organism=Citrus sinensis; type=EST; length=918bp
TAGTCAAATAGGTCATCAGGTGACCTTGTTTACTACGGGAAAGGCACCAA
TCGCCCAACAATTGCCCGGTGAATCATACCAGGAATTCGCCGAATTTTCT
TCCAAGATCTTGCATTTGAAAGGAGACAGAAAGGACTATGATTTTGTGAA
ATCCAGTCTCTCTGCCAAAGGCTTTGATGTTGTTTATGATATAAATGGAC
GAGAGGCAGATGAAGTCGAACCCATATTGGATGCACTGCCAAATCTAGAA
CAGTATGCTAAAGATATTTATAGAGTTTAATTAGCTATTTTAAAAGTCAT
TTCTTTCATTTTAACCCATCAGGTCTTTAGTAGGGTTAATAGTTAAACAT
TTTTTAAGTCTTTTAAATAAGATGAATTCCAAAATTTGACATGAAGTTCC
TTTAATACTGTTAAGAATACAGATCAAATTGGAATGGGCACAGTTAAATA
ATAAATCTTGCAGAAGAGAAATCCCACTCAGTGTAGATAGGCATGTCAAC
ACTGATGGTGAGCAAAAAGTGAAATAGCTTGCTTGATTTATTTGAATAGA
TAATTAAATAATACCATGGATATATTTAGTTGGCGTATGTCTACCAGTAC
TACATTCCTTAGAGTGAAGATGCCTGAAACCCTTCATTAGCATGTTATAA
ATGAAGTGGCAGCAATTAAATTGGATAGTATGAGCTAACAGGATAGATAA
TAAGTATTTGCAAGACCCTTCCGTTGTTGCTTGTATATCTAACCTAACTA
CAATCCCTTCATTATTTTTCATGATCCAAAACATTAGGAAATCTCTTTTT
GGCGGTTTTCCAGGTCATCTACGGCCCCCAAGTGGTGGTATTCTAAATCT
GACCTTTACCACCCGGGGAGGAAGCCCAAGAATATATTTTGGTTAGGATG
CTAACCCAAAATGTGGAG
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