EY650451

Overview
NameEY650451
Unique NameEY650451
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY650451 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 45.8246 bits (107), Expect = 6.106e-11
Identity = 25/57 (43.86%), Postives = 32/57 (56.14%), Query Frame = 1 
Query:  175 WKGADACAVAWTGVDCSPKSEREV*LYLPSHSLRGPIAP-L*LRHQLRVLNLHDNRL 342
            W+  D     W GV C  K++R + L L  H LRGP+ P L    QLR+L LH+N L
Sbjct:   53 WRPEDPDPCNWKGVTCDAKTKRVIALSLTYHKLRGPLPPELGKLDQLRLLMLHNNAL 109

HSP 2 Score: 42.743 bits (99), Expect = 6.106e-11
Identity = 23/71 (32.39%), Postives = 31/71 (43.66%), Query Frame = 2 
Query:  359 AITNCTXXXXXXXXXXXFCAEIPHQISSLMGILRFDLSDNNIRGTISGHGTNLTRVETLRCQNNELTGGIP 571
            ++ NCT               IP +I +L G+   DLS+NN+ G I      L R+      NN L G IP
Sbjct:  116 SLGNCTALEGIYLQNNYITGTIPSEIGNLSGLKNLDLSNNNLNGAIPASLGQLKRLTKFNVSNNFLVGKIP 186
The following BLAST results are available for this feature:
BLAST of EY650451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FEI2_ARATH6.106e-1143.86LRR receptor-like serine/threonine-protein kinase ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-011-B10-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650451 ID=EY650451; Name=EY650451; organism=Citrus sinensis; type=EST; length=891bp
CCACGCGTCCGAAGCCTACTGTCTCCTCCACAAACCAGCATGAAGAAAGC
TCGTGTCTTTGTTCTTTCTCTGGCTCTCTTACTTCTCTCCGTTTCTTCTT
CACACCCGAATGACACAGATGCCCTCAAGCTTTTTGGCCTACAGACCGAC
ACTCACGGCAACCTCCTCTTCAACTGGAAGGGCGCCGACGCGTGCGCCGT
AGCATGGACCGGCGTAGATTGCTCGCCCAAAAGCGAGCGCGAGGTTTAAC
TATACCTGCCCTCCCATTCACTACGAGGGCCCATCGCCCCCCTCTAACTC
CGCCACCAGCTCCGCGTCCTCAACCTACACGACAACCGCTTGAGACGGAA
CCATTATGGCGATCACCAACTGCACCGACCTATAACTCGATTACCTCTAC
AGCTACGACTTCTGCGCCGAAATCCCGCACCAAATATCGTCCCTCATGGG
GATTCTCCGCTTTGATTTATCGGATAACAACATCCGCGGCACAATCTCGG
GACACGGGACGAACTTGACCCGGGTGGAGACGCTCCGGTGTCAGAACAAT
GAGCTGACTGGTGGAATCCCCGATTTATCGGCCTCGCTTAAGGATTGATA
AGAGCTCAACTTGACTAACAACGAACTCTACAGTCGCGTACCGGAAGGTT
TGTCGAAGAAAATCGGAGAGCACATCTTTATCGGCGATGAAAGACTCTGC
CGGTCTATTCCATGGCCGCGTGCTCGTTCACAGGAGAACACCTGCNGATG
TTGCATCGGCTGCTGAAAAGTGCCGTCATACCCAAGTCAATGTCGAGATG
CCACCTTTGGGCGGGAAAGACCCAGCAAAAAAGGCCTGACCTGCTTTATT
GTGGCATTGGATAGCATTGCGTGCGCTCTTTGGGGACTGAT
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