EY650437

Overview
NameEY650437
Unique NameEY650437
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length916
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650437 vs. ExPASy Swiss-Prot
Match: GLSK_RAT (Glutaminase kidney isoform, mitochondrial OS=Rattus norvegicus GN=Gls PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.148e-14
Identity = 37/96 (38.54%), Postives = 60/96 (62.50%), Query Frame = 2
Query:  197 GSEAIDPRVRLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSR-GADVDPEDRWGSTPLADAVYYKHHDVIKLLEEH 481
            G + +   + L++ A  GD+  ++    S  D+  RD D RTALHVAA +G  +VV+ LL     +  P+DRW +TP+ +A+++ HHDV K+L+E+
Sbjct:  552 GDQRVKSVINLLFAAYTGDVSALRRFALSAMDMEQRDYDSRTALHVAAAEGHVEVVKFLLEACKVNPFPKDRWNNTPMDEALHFGHHDVFKILQEY 647          
BLAST of EY650437 vs. ExPASy Swiss-Prot
Match: GLSK_HUMAN (Glutaminase kidney isoform, mitochondrial OS=Homo sapiens GN=GLS PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.148e-14
Identity = 37/96 (38.54%), Postives = 60/96 (62.50%), Query Frame = 2
Query:  197 GSEAIDPRVRLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSR-GADVDPEDRWGSTPLADAVYYKHHDVIKLLEEH 481
            G + +   + L++ A  GD+  ++    S  D+  RD D RTALHVAA +G  +VV+ LL     +  P+DRW +TP+ +A+++ HHDV K+L+E+
Sbjct:  547 GDQRVKSVINLLFAAYTGDVSALRRFALSAMDMEQRDYDSRTALHVAAAEGHVEVVKFLLEACKVNPFPKDRWNNTPMDEALHFGHHDVFKILQEY 642          
BLAST of EY650437 vs. ExPASy Swiss-Prot
Match: GLSL_RAT (Glutaminase liver isoform, mitochondrial OS=Rattus norvegicus GN=Gls2 PE=2 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 2.165e-13
Identity = 38/89 (42.70%), Postives = 57/89 (64.04%), Query Frame = 2
Query:  221 VRLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDP--EDRWGSTPLADAVYYKHHDVIKLLEEH 481
            V L++ A  GD+  ++    S  D+  +D D RTALHVAA +G  DVV+ L+     V+P  +DRWG+ PL DAV + H +V+KLL+++
Sbjct:  488 VNLLFAAYSGDVSALRRFALSAVDMEQKDYDSRTALHVAAAEGHIDVVKFLI-EACKVNPFVKDRWGNIPLDDAVQFNHLEVVKLLQDY 575          
BLAST of EY650437 vs. ExPASy Swiss-Prot
Match: GLSL_MOUSE (Glutaminase liver isoform, mitochondrial OS=Mus musculus GN=Gls2 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.228e-13
Identity = 37/89 (41.57%), Postives = 57/89 (64.04%), Query Frame = 2
Query:  221 VRLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDP--EDRWGSTPLADAVYYKHHDVIKLLEEH 481
            V L++ A  GD+  ++    S  D+  +D D RTALHVAA +G  +VV+ L+     V+P  +DRWG+ PL DAV + H +V+KLL+++
Sbjct:  488 VNLLFAAYSGDVSALRRFALSAMDMEQKDYDSRTALHVAAAEGHIEVVKFLI-EACKVNPFVKDRWGNIPLDDAVQFNHLEVVKLLQDY 575          
BLAST of EY650437 vs. ExPASy Swiss-Prot
Match: GLSL_HUMAN (Glutaminase liver isoform, mitochondrial OS=Homo sapiens GN=GLS2 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.228e-13
Identity = 37/89 (41.57%), Postives = 57/89 (64.04%), Query Frame = 2
Query:  221 VRLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDP--EDRWGSTPLADAVYYKHHDVIKLLEEH 481
            V L++ A  GD+  ++    S  D+  +D D RTALHVAA +G  +VV+ L+     V+P  +DRWG+ PL DAV + H +V+KLL+++
Sbjct:  488 VNLLFAAYSGDVSALRRFALSAMDMEQKDYDSRTALHVAAAEGHIEVVKFLI-EACKVNPFAKDRWGNIPLDDAVQFNHLEVVKLLQDY 575          
BLAST of EY650437 vs. ExPASy Swiss-Prot
Match: GLS1_CAEEL (Putative glutaminase DH11.1 OS=Caenorhabditis elegans GN=DH11.1 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 3.127e-12
Identity = 36/95 (37.89%), Postives = 57/95 (60.00%), Query Frame = 2
Query:  212 DPRVRLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLS-RGADVDPEDRWGSTPLADAVYYKHHDVIKLLEEHGAKP 493
            D  + + ++A  GDL  ++ L   G D+N  D D RT LH+AA +G   +++ L++    DVD +DRWG TPL +A ++KH  V + LE+   +P
Sbjct:  480 DRLIPVFHVARAGDLPTMRRLYMQGEDLNTSDHDDRTVLHIAATEGYETMIKFLVNVAKVDVDKKDRWGRTPLDEAKFFKHDHVSRFLEKAMKRP 574          
BLAST of EY650437 vs. ExPASy Swiss-Prot
Match: HOS4_YEAST (Protein HOS4 OS=Saccharomyces cerevisiae GN=HOS4 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.083e-12
Identity = 44/122 (36.07%), Postives = 70/122 (57.38%), Query Frame = 2
Query:  218 RVRLMYMANEGDLDGIKELLDSGT-DVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPE--DRWGSTPLADAVYYKHHDVIKLLEEHGAKPPTAPMHVQNAREVPEYEIDPKELDFSN 574
            R RL    ++G  D +K++++ G  D+N +D    TALH AA QG  ++V LL+  GADV+ +  + +G TPL DA    H DV+K L ++GA P      ++NA+ +  +E    E +F +
Sbjct:  331 RTRLQIACDKGKYDVVKKMIEEGGYDINDQDNAGNTALHEAALQGHIEIVELLIENGADVNIKSIEMFGDTPLIDASANGHLDVVKYLLKNGADPT-----IRNAKGLTAFESVDDESEFDD 447          
BLAST of EY650437 vs. ExPASy Swiss-Prot
Match: GORK_ARATH (Potassium channel GORK OS=Arabidopsis thaliana GN=GORK PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 9.097e-12
Identity = 40/105 (38.10%), Postives = 63/105 (60.00%), Query Frame = 2
Query:  245 EGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPEDRWGSTPLADAVYYKHHDVIKLLEEHGAKPPTAPMHVQNAREVPEYEIDPKE 559
            +GD D +K LL SG + N  D D RT LHVAA +G   + ++L+  GA V  +DRWG++PL +A    +  +IKLLE+   K   + ++  + RE+ E  I+ ++
Sbjct:  638 KGDSDFLKRLLSSGMNPNSEDYDHRTPLHVAASEGLFLMAKMLVEAGASVISKDRWGNSPLDEARLCGNKKLIKLLED--VKNAQSSIYPSSLRELQEERIERRK 740          

HSP 2 Score: 70.0922 bits (170), Expect = 2.027e-11
Identity = 37/97 (38.14%), Postives = 56/97 (57.73%), Query Frame = 2
Query:  197 GSEAIDPRVRLMYMANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPEDRWGSTPLADAVYYKHHDVIKLLEEHGA 487
            G +  +  +++   A +GD   +K L+ SG D N  D D R+ LH+AAC+G  D+   L+  G DV+ +D++G TPL +AV      VI LL + GA
Sbjct:  525 GKQEAELALKVNSAAFQGDFYQLKSLIRSGADPNKTDYDGRSPLHLAACRGYEDITLFLIQEGVDVNLKDKFGHTPLFEAVKAGQEGVIGLLVKEGA 621          
BLAST of EY650437 vs. ExPASy Swiss-Prot
Match: ANR12_HUMAN (Ankyrin repeat domain-containing protein 12 OS=Homo sapiens GN=ANKRD12 PE=1 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 1.188e-11
Identity = 39/102 (38.24%), Postives = 55/102 (53.92%), Query Frame = 2
Query:  239 ANEGDLDGIKELLDSGTDVNFRDIDKRTALHVAACQGRTDVVRLLLSRGADVDPEDRWGSTPLADAVYYKHHDVIKLLEEHGAKPPTAPMHVQNAREVPEYE 544
            A  GD+  +KEL+  G +VN +D    T LH A   G  DV ++L++ GADV+ +     TPL D+    H D++KLL  HG  P  A  H +   +V E E
Sbjct:  193 AIRGDVKQVKELISLGANVNVKDFAGWTPLHEACNVGYYDVAKILIAAGADVNTQGLDDDTPLHDSASSGHRDIVKLLLRHGGNPFQANKHGERPVDVAETE 294          
BLAST of EY650437 vs. ExPASy Swiss-Prot
Match: TNKS1_HUMAN (Tankyrase-1 OS=Homo sapiens GN=TNKS PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.647e-11
Identity = 48/120 (40.00%), Postives = 65/120 (54.17%), Query Frame = 2
Query:  212 DPRVRLMYMANEGDLDGIKELLDSGTDVNFRDIDKR--TALHVAACQGRTDVVRLLLSRGADVDPEDRWGSTPLADAVYYKHHDVIKLLEEHGAKPPTA------PMHVQNAREVPEYEI 547
            D   RL+  +  GDL+ +K+L  S  +VN RD++ R  T LH AA   R  VV  LL  GADV  +D+ G  PL +A  Y H++V +LL  HGA    A      P+H   A+   +YEI
Sbjct:  649 DVDYRLLEASKAGDLETVKQLCSS-QNVNCRDLEGRHSTPLHFAAGYNRVSVVEYLLHHGADVHAKDKGGLVPLHNACSYGHYEVAELLVRHGASVNVADLWKFTPLHEAAAK--GKYEI 765          
The following BLAST results are available for this feature:
BLAST of EY650437 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
GLSK_RAT1.148e-1438.54Glutaminase kidney isoform, mitochondrial OS=Rattu... [more]
GLSK_HUMAN1.148e-1438.54Glutaminase kidney isoform, mitochondrial OS=Homo ... [more]
GLSL_RAT2.165e-1342.70Glutaminase liver isoform, mitochondrial OS=Rattus... [more]
GLSL_MOUSE8.228e-1341.57Glutaminase liver isoform, mitochondrial OS=Mus mu... [more]
GLSL_HUMAN8.228e-1341.57Glutaminase liver isoform, mitochondrial OS=Homo s... [more]
GLS1_CAEEL3.127e-1237.89Putative glutaminase DH11.1 OS=Caenorhabditis eleg... [more]
HOS4_YEAST4.083e-1236.07Protein HOS4 OS=Saccharomyces cerevisiae GN=HOS4 P... [more]
GORK_ARATH9.097e-1238.10Potassium channel GORK OS=Arabidopsis thaliana GN=... [more]
ANR12_HUMAN1.188e-1138.24Ankyrin repeat domain-containing protein 12 OS=Hom... [more]
TNKS1_HUMAN2.647e-1140.00Tankyrase-1 OS=Homo sapiens GN=TNKS PE=1 SV=2[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-100-011-A07-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650437 ID=EY650437; Name=EY650437; organism=Citrus sinensis; type=EST; length=916bp
CCACGCGTCCGTATCTACACGCTCACTCTTCAATCAAGCAAACAACAAGA
CAACCTAAATTCTCTCTGTGTCGATACTTTCGACAGAAGTTTTCCGCCCA
GCTCCAATGGAGTCAAAATCATCTGCTCGATTCACCTTGGGCAAGCAGTC
TTCTCTGGCGCCGGACCAGCCGCTTCCAGCCGACGGCGATGCTGACGGCT
CCGAGGCCATTGACCCCAGGGTGAGGCTCATGTACATGGCTAATGAAGGT
GATTTGGACGGGATTAAGGAGCTCTTAGACTCCGGCACCGATGTTAATTT
CCGTGACATCGATAAACGCACCGCTTTGCATGTTGCCGCTTGTCAGGGAA
GGACTGATGTTGTACGGCTGTTGCTCAGCCGTGGAGCTGACGTGGATCCT
GAAGACCGCTGGGGCAGCACTCCTCTTGCAGATGCGGTGTATTACAAGCA
CCACGACGTGATCAAACTTTTGGAGGAACATGGTGCGAAGCCTCCAACAG
CTCCCATGCATGTTCAAAATGCTCGTGAAGTCCCAGAGTACGAAATTGAT
CCTAAAGAGCTCGATTTTTCCAACAGTGTTGAGATTACAAAGGGAACTTT
TCGGATTGCATCATGGCGTGGAACACAANGTGCTGTCAAAACACTTGGAG
AGGAAGTTTTCACTGATGAGGACTAAGTGTGGGTTGGTCTAATACCATCA
CTGATTTTTGGTCCTTTTTCTTATTTTGCATTTTTTCATTTTCTTAAAGN
TTCTTTTATTTTTAATTTTGGNAGTATGCCTTCTGGAATCTTTCTGCGAC
TTTGGAGTTCATTGCTGCTTGGCATGCAGGAAGCATCCATTGACGAGCTG
CATACTTCAGAAATTCGCATCCAATGTTGCCAGTTTTGGGTGCTGGACCC
AAGCCTCAATGATGAT
back to top