EY650414

Overview
NameEY650414
Unique NameEY650414
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650414 vs. ExPASy Swiss-Prot
Match: RCD1_XENTR (Cell differentiation protein RCD1 homolog OS=Xenopus tropicalis GN=rqcd1 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.424e-48
Identity = 93/142 (65.49%), Postives = 114/142 (80.28%), Query Frame = 1
Query:    7 VRVDDTEVISFLLSTXIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSSCLREDPTTRRWLQQLLHNVGVNRV 432
            V+ D+ EVI+FLL+T IIPLCLR ME GSELSKTVATFI+QKILLDD GL YIC T ERF  V  +LG MV  L+++PS+RLLKH++RCYLRLSDNPRA +ALR CLPD L+D TF+  L++D TT+RWL QL+ N+   +V
Sbjct:  147 VKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQV 288          
BLAST of EY650414 vs. ExPASy Swiss-Prot
Match: RCD1_XENLA (Cell differentiation protein RCD1 homolog OS=Xenopus laevis GN=rqcd1 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.424e-48
Identity = 93/142 (65.49%), Postives = 114/142 (80.28%), Query Frame = 1
Query:    7 VRVDDTEVISFLLSTXIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSSCLREDPTTRRWLQQLLHNVGVNRV 432
            V+ D+ EVI+FLL+T IIPLCLR ME GSELSKTVATFI+QKILLDD GL YIC T ERF  V  +LG MV  L+++PS+RLLKH++RCYLRLSDNPRA +ALR CLPD L+D TF+  L++D TT+RWL QL+ N+   +V
Sbjct:  147 VKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQV 288          
BLAST of EY650414 vs. ExPASy Swiss-Prot
Match: RCD1_RAT (Cell differentiation protein RCD1 homolog OS=Rattus norvegicus GN=Rqcd1 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.424e-48
Identity = 93/142 (65.49%), Postives = 114/142 (80.28%), Query Frame = 1
Query:    7 VRVDDTEVISFLLSTXIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSSCLREDPTTRRWLQQLLHNVGVNRV 432
            V+ D+ EVI+FLL+T IIPLCLR ME GSELSKTVATFI+QKILLDD GL YIC T ERF  V  +LG MV  L+++PS+RLLKH++RCYLRLSDNPRA +ALR CLPD L+D TF+  L++D TT+RWL QL+ N+   +V
Sbjct:  147 VKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQV 288          
BLAST of EY650414 vs. ExPASy Swiss-Prot
Match: RCD1_PONAB (Cell differentiation protein RCD1 homolog OS=Pongo abelii GN=RQCD1 PE=2 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 3.424e-48
Identity = 93/142 (65.49%), Postives = 114/142 (80.28%), Query Frame = 1
Query:    7 VRVDDTEVISFLLSTXIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSSCLREDPTTRRWLQQLLHNVGVNRV 432
            V+ D+ EVI+FLL+T IIPLCLR ME GSELSKTVATFI+QKILLDD GL YIC T ERF  V  +LG MV  L+++PS+RLLKH++RCYLRLSDNPRA +ALR CLPD L+D TF+  L++D TT+RWL QL+ N+   +V
Sbjct:  147 VKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQV 288          
BLAST of EY650414 vs. ExPASy Swiss-Prot
Match: RCD1_MOUSE (Cell differentiation protein RCD1 homolog OS=Mus musculus GN=Rqcd1 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.424e-48
Identity = 93/142 (65.49%), Postives = 114/142 (80.28%), Query Frame = 1
Query:    7 VRVDDTEVISFLLSTXIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSSCLREDPTTRRWLQQLLHNVGVNRV 432
            V+ D+ EVI+FLL+T IIPLCLR ME GSELSKTVATFI+QKILLDD GL YIC T ERF  V  +LG MV  L+++PS+RLLKH++RCYLRLSDNPRA +ALR CLPD L+D TF+  L++D TT+RWL QL+ N+   +V
Sbjct:  147 VKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQV 288          
BLAST of EY650414 vs. ExPASy Swiss-Prot
Match: RCD1_MACFA (Cell differentiation protein RCD1 homolog OS=Macaca fascicularis GN=RQCD1 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.424e-48
Identity = 93/142 (65.49%), Postives = 114/142 (80.28%), Query Frame = 1
Query:    7 VRVDDTEVISFLLSTXIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSSCLREDPTTRRWLQQLLHNVGVNRV 432
            V+ D+ EVI+FLL+T IIPLCLR ME GSELSKTVATFI+QKILLDD GL YIC T ERF  V  +LG MV  L+++PS+RLLKH++RCYLRLSDNPRA +ALR CLPD L+D TF+  L++D TT+RWL QL+ N+   +V
Sbjct:  147 VKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQV 288          
BLAST of EY650414 vs. ExPASy Swiss-Prot
Match: RCD1_HUMAN (Cell differentiation protein RCD1 homolog OS=Homo sapiens GN=RQCD1 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.424e-48
Identity = 93/142 (65.49%), Postives = 114/142 (80.28%), Query Frame = 1
Query:    7 VRVDDTEVISFLLSTXIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSSCLREDPTTRRWLQQLLHNVGVNRV 432
            V+ D+ EVI+FLL+T IIPLCLR ME GSELSKTVATFI+QKILLDD GL YIC T ERF  V  +LG MV  L+++PS+RLLKH++RCYLRLSDNPRA +ALR CLPD L+D TF+  L++D TT+RWL QL+ N+   +V
Sbjct:  147 VKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQV 288          
BLAST of EY650414 vs. ExPASy Swiss-Prot
Match: RCD1_BOVIN (Cell differentiation protein RCD1 homolog OS=Bos taurus GN=RQCD1 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.424e-48
Identity = 93/142 (65.49%), Postives = 114/142 (80.28%), Query Frame = 1
Query:    7 VRVDDTEVISFLLSTXIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSSCLREDPTTRRWLQQLLHNVGVNRV 432
            V+ D+ EVI+FLL+T IIPLCLR ME GSELSKTVATFI+QKILLDD GL YIC T ERF  V  +LG MV  L+++PS+RLLKH++RCYLRLSDNPRA +ALR CLPD L+D TF+  L++D TT+RWL QL+ N+   +V
Sbjct:  147 VKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQV 288          
BLAST of EY650414 vs. ExPASy Swiss-Prot
Match: RCD1_DANRE (Cell differentiation protein RCD1 homolog OS=Danio rerio GN=rqcd1 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.898e-47
Identity = 92/142 (64.79%), Postives = 113/142 (79.58%), Query Frame = 1
Query:    7 VRVDDTEVISFLLSTXIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSSCLREDPTTRRWLQQLLHNVGVNRV 432
            V+ D+ EVI+FLL+T IIPLCLR ME GSELSKTVATFI+QKILLDD GL YIC T ERF  V  +LG MV  L+++PS+RLLKH++RCYLRLSDN RA +ALR CLPD L+D TF+  L++D TT+RWL QL+ N+   +V
Sbjct:  146 VKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDNSRAREALRQCLPDQLKDTTFAQVLKDDSTTKRWLAQLVKNLQEGQV 287          
BLAST of EY650414 vs. ExPASy Swiss-Prot
Match: RCD1_SCHPO (Cell differentiation protein rcd1 OS=Schizosaccharomyces pombe GN=rcd1 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.682e-44
Identity = 92/137 (67.15%), Postives = 106/137 (77.37%), Query Frame = 1
Query:    7 VRVDDTEVISFLLSTXIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSSCLREDPTTRRWLQQLLHNV 417
            V+ D  EVI+FLLST IIPLCLR ME GSELSKTVA FIVQK L DDVGL YIC T ERF+AV  VL NMV  L +  + RLLKH+IRCYLRLSDNPRA +ALR CLP+ LRDATF+  L++D  T++ L QLL N+
Sbjct:  139 VKNDSPEVINFLLSTEIIPLCLRIMENGSELSKTVAIFIVQKFLCDDVGLQYICQTYERFYAVASVLNNMVMQLVDSFAFRLLKHVIRCYLRLSDNPRAREALRHCLPEPLRDATFAQVLKDDHNTKKCLAQLLINL 275          
The following BLAST results are available for this feature:
BLAST of EY650414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
RCD1_XENTR3.424e-4865.49Cell differentiation protein RCD1 homolog OS=Xenop... [more]
RCD1_XENLA3.424e-4865.49Cell differentiation protein RCD1 homolog OS=Xenop... [more]
RCD1_RAT3.424e-4865.49Cell differentiation protein RCD1 homolog OS=Rattu... [more]
RCD1_PONAB3.424e-4865.49Cell differentiation protein RCD1 homolog OS=Pongo... [more]
RCD1_MOUSE3.424e-4865.49Cell differentiation protein RCD1 homolog OS=Mus m... [more]
RCD1_MACFA3.424e-4865.49Cell differentiation protein RCD1 homolog OS=Macac... [more]
RCD1_HUMAN3.424e-4865.49Cell differentiation protein RCD1 homolog OS=Homo ... [more]
RCD1_BOVIN3.424e-4865.49Cell differentiation protein RCD1 homolog OS=Bos t... [more]
RCD1_DANRE2.898e-4764.79Cell differentiation protein RCD1 homolog OS=Danio... [more]
RCD1_SCHPO6.682e-4467.15Cell differentiation protein rcd1 OS=Schizosacchar... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-010-G05-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650414 ID=EY650414; Name=EY650414; organism=Citrus sinensis; type=EST; length=899bp
CCACGCGTCCGGGTTGATGACACAGAAGTTATTAGCTTCCTTCTTTCAAC
ANAAATAATCCCACTCTGCCTGCGGACCATGGAGATGGGCAGCGAGTTGT
CAAAAACAGTTGCGACATTTATAGTGCAGAAAATATTGTTAGATGATGTG
GGCTTGGATTATATTTGTACTACAGCAGAGAGGTTTTTTGCAGTAGGGCG
AGTTTTGGGGAACATGGTTGCGGCACTTGCTGAGCAACCTTCTTCGCGGC
TGCTCAAGCATATTATTCGATGTTATCTGCGATTGTCAGACAATCCGAGG
GCTTGTGATGCTCTAAGAAGTTGCCTTCCAGACATGTTAAGAGATGCCAC
CTTCAGTAGTTGCCTTCGTGAAGATCCAACAACAAGGAGATGGCTGCAAC
AGCTGCTTCATAATGTTGGAGTCAATCGAGTTCCAACACTTCATGCTGGA
ACAGCATTTGATCATATGCTGGTGAGCTGAATTGGAAGCAAAGCAATTTT
TCAATCTATTTGATGCCCATAGTTGCAAGTCCAAACTGCGCATCGTAGGC
TGATTCATAACATTTTCACCTTTTTGTTTATGTCAATTTCTGTGGTTTAG
TGTCTGTAATTAATGGGTGTTTAAGAGAGAATCAGGTCAGGGGTGAAAAC
AACAAAGTTGGTTTAATCACCTGAGTTAGCTATAACTTGTCGTCTGCCTC
TCATTGTAGCGTAGTAAGTTGTGATCAAGCTATTTTTGTTTGCATTGAGT
GGCATCATGCTCAAAACTTCAATAATTGTCGNCTTTATTTCTGGGTTGGG
GTGCGTGATGACCCACATTTACCTATGGCAGAGTAAAACTTGCTGATAAA
TAATNCTTTGTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAGCGGGCG
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