EY650321

Overview
NameEY650321
Unique NameEY650321
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length960
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY650321 vs. ExPASy Swiss-Prot
Match: PAO_ARATH (Pheophorbide a oxygenase, chloroplastic OS=Arabidopsis thaliana GN=PAO PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 6.434e-40
Identity = 85/210 (40.48%), Postives = 118/210 (56.19%), Query Frame = 3
Query:  201 SPSSQVSTEATDPPERELETNSQEEK----FDWFSQWYPLMPVCDLDKRVPHAKKVLGLDVVVWWDRNENEWRVFADACPHRLAPLSEGRIDQWGRLQCVYHGWCFSGSGDCKFIPQAPPDGPPVHTFEI--ACAAVYPSTVQHDIVWFWP--NIAPRYQDIIKTKIPXHIPELDDPSFTKLVGNRDIPYGYXGLWEKSMDPAHGXYAHY 806
            +P S  ++++T+    E E    +E+    F W   WYP+  V DLD  VP   ++LG D+V+W+DRN+ +W  F D CPHRLAPLSEGR+D+ G LQC YHGW F G G C  IPQA   GP     +   ACA  +P+ V   +++ WP  N   R   I   ++P    + D P F+ +   RD+ YGY  L E   DP+H  +AH+
Sbjct:   52 APPSVPTSDSTEEKRIEEEYGGDKEEEGSEFKWRDHWYPVSLVEDLDPNVPTPFQLLGRDLVLWFDRNDQKWAAFDDLCPHRLAPLSEGRLDENGHLQCSYHGWSFGGCGSCTRIPQAATSGPEARAVKSPRACAIKFPTMVSQGLLFVWPDENGWDRANSIEPPRLP---DDFDKPEFSTVTIQRDLFYGYDTLMENVSDPSHIDFAHH 258          
BLAST of EY650321 vs. ExPASy Swiss-Prot
Match: CAO_ORYSJ (Chlorophyllide a oxygenase, chloroplastic OS=Oryza sativa subsp. japonica GN=CAO PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.805e-11
Identity = 55/218 (25.23%), Postives = 91/218 (41.74%), Query Frame = 3
Query:  192 TTLSPSSQVSTEATD--PPERELETNSQEEKFDWFSQ--WYPLMPVCDLDKRVPHAKKVLGLDVVVWWDRNENEWRVFA----------DACPHRLAPLSEGRIDQWGRLQCVYHGWCFSGSGDCKFIPQAPPDGPPVHTFEIACAAVYPSTVQHDIVWFWPNIAPRYQDIIKTKIPXHIPELDDPSFTKLVGNRDIPYGYXGLWEKSMDPAHGXYAH 803
            T+L+PS+  ++   +  PP R L  +   + ++   +  WYP+    DL             D +V  D  E +W +F           + C HR  PL  G +++ GR+QC YHGW +S  G C+ +P        + +         P   Q  +VW WP       D  K+ IP  +P        ++V   ++P  +  L +  +D AH  + H
Sbjct:  181 TSLAPSTSSASRVVNKKPPRRSLNVSGPVQPYNPSLKNFWYPVAFSSDLKD-----------DTMVPIDCFEEQWVIFRGKDGRPGCVMNTCAHRACPLHLGSVNE-GRIQCPYHGWEYSTDGKCEKMPSTKMLNVRIRSL--------PCFEQEGMVWIWPG-----NDPPKSTIPSLLPPSGFTIHAEIV--MELPVEHGLLLDNLLDLAHAPFTH 371          
The following BLAST results are available for this feature:
BLAST of EY650321 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PAO_ARATH6.434e-4040.48Pheophorbide a oxygenase, chloroplastic OS=Arabido... [more]
CAO_ORYSJ4.805e-1125.23Chlorophyllide a oxygenase, chloroplastic OS=Oryza... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-009-G04-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY650321 ID=EY650321; Name=EY650321; organism=Citrus sinensis; type=EST; length=960bp
CCACGCGTCCGGNAACGGTGCTGCATGCAGCCATGGAAGCTCTTATACTC
TCCTCGGTTTCACCTTTTTGTAACGCTACATTCAAACTTGAGTACAATAA
GACCCACTTCACTAAGCCCAAGTTCTTAAGCTTTCAGTTCAGTTCCCTGT
CCACTTTATCATCTTTCTCATCAAAACCATACAAAATCTTCACCACCTTA
TCACCATCGTCACAAGTTTCAACTGAAGCCACAGACCCACCAGAAAGAGA
GCTTGAAACTAACTCACAAGAGGAGAAATTTGATTGGTTCTCACAGTGGT
ATCCATTGATGCCGGTGTGTGATTTGGACAAGAGAGTCCCTCATGCAAAG
AAAGTGTTGGGGCTTGATGTCGTGGTTTGGTGGGACAGGAATGAGAATGA
ATGGAGAGTCTTTGCTGATGCTTGTCCTCACAGATTGGCTCCTTTGTCAG
AAGGAAGAATTGATCAATGGGGAAGGCTTCAGTGTGTGTATCATGGCTGG
TGCTTCAGTGGCTCGGGTGACTGTAAATTTATCCCTCAGGCTCCCCCAGA
CGGCCCCCCGGTCCACACATTCGAGATAGCATGTGCAGCAGTTTATCCAA
GTACCGTCCAGCATGACATCGTATGGTTTTGGCCAAATATTGCTCCTCGG
TACCAGGATATTATCAAGACTAAGATACCTNCTCACATCCCGGAACTAGA
TGACCCGTCATTCACAAAATTGGTTGGGAACAGAGATATACCTTATGGGT
ATGANGGTCTATGGGAAAAATCTATGGACCCTGCTCATGGTNCATATGCA
CATTACGGATGGATGCGTACANGGAAACCCNAAGTGAGCTCGATAGAGAA
GGGGGANGACANNNTGNANTGAGTGTCATAAATAAACTAAATGGGNTCAT
GGAAAGCAGATNGGGGGAGTANCAATTTTTGGCACCTGNATCTTTTTGCT
ATACGGATCT
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